IMPDH2
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Summary
IMPDH2 (inosine monophosphate dehydrogenase 2, HGNC:6053) is a protein-coding gene on chromosome 3p21.31, encoding Inosine-5’-monophosphate dehydrogenase 2 (P12268). Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. It is a selective cancer dependency (DepMap: 48.5% of cell lines).
This gene encodes the rate-limiting enzyme in the de novo guanine nucleotide biosynthesis. It is thus involved in maintaining cellular guanine deoxy- and ribonucleotide pools needed for DNA and RNA synthesis. The encoded protein catalyzes the NAD-dependent oxidation of inosine-5’-monophosphate into xanthine-5’-monophosphate, which is then converted into guanosine-5’-monophosphate. This gene is up-regulated in some neoplasms, suggesting it may play a role in malignant transformation.
Source: NCBI Gene 3615 — RefSeq curated summary.
At a glance
- Gene–disease (curated): neurodevelopmental disorder (Strong, GenCC)
- GWAS associations: 14
- Clinical variants (ClinVar): 96 total — 4 likely-pathogenic
- Phenotypes (HPO): 34
- Druggable target: yes — 2 molecules with ChEMBL bioactivity
- Cancer dependency (DepMap): dependent in 48.5% of screened cell lines
- MANE Select transcript:
NM_000884
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6053 |
| Approved symbol | IMPDH2 |
| Name | inosine monophosphate dehydrogenase 2 |
| Location | 3p21.31 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000178035 |
| Ensembl biotype | protein_coding |
| OMIM | 146691 |
| Entrez | 3615 |
Gene structure
Transcript identifiers
Ensembl transcripts: 68 — 37 protein_coding, 29 retained_intron, 2 nonsense_mediated_decay
ENST00000326739, ENST00000429182, ENST00000442157, ENST00000462980, ENST00000463903, ENST00000466147, ENST00000472328, ENST00000481274, ENST00000484872, ENST00000485500, ENST00000491610, ENST00000496837, ENST00000676607, ENST00000676627, ENST00000676708, ENST00000676864, ENST00000677010, ENST00000677108, ENST00000677168, ENST00000677185, ENST00000677205, ENST00000677344, ENST00000677480, ENST00000677519, ENST00000677593, ENST00000677740, ENST00000677991, ENST00000678001, ENST00000678085, ENST00000678177, ENST00000678603, ENST00000678724, ENST00000678920, ENST00000679019, ENST00000679117, ENST00000679339, ENST00000881190, ENST00000881191, ENST00000881192, ENST00000881193, ENST00000881194, ENST00000881195, ENST00000881196, ENST00000937810, ENST00000937811, ENST00000937812, ENST00000937813, ENST00000937814, ENST00000937815, ENST00000937816, ENST00000937817, ENST00000937818, ENST00000937819, ENST00000937820, ENST00000937821, ENST00000937822, ENST00000937823, ENST00000937824, ENST00000937825, ENST00000937826, ENST00000968719, ENST00000968720, ENST00000968721, ENST00000968722, ENST00000968723, ENST00000968724, ENST00000968725, ENST00000968726
RefSeq mRNA: 4 — MANE Select: NM_000884
NM_000884, NM_001410759, NM_001410760, NM_001410761
CCDS: CCDS2786, CCDS93267, CCDS93268, CCDS93269
Canonical transcript exons
ENST00000326739 — 14 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001269198 | 49024495 | 49024578 |
| ENSE00001269218 | 49025126 | 49025269 |
| ENSE00001269252 | 49027710 | 49027916 |
| ENSE00001269259 | 49028248 | 49028322 |
| ENSE00001923105 | 49029253 | 49029398 |
| ENSE00003468791 | 49026960 | 49027047 |
| ENSE00003469699 | 49026519 | 49026609 |
| ENSE00003471529 | 49024896 | 49025040 |
| ENSE00003477985 | 49028758 | 49028806 |
| ENSE00003503351 | 49026324 | 49026419 |
| ENSE00003553096 | 49024659 | 49024802 |
| ENSE00003597955 | 49028431 | 49028532 |
| ENSE00003685190 | 49026687 | 49026886 |
| ENSE00003688138 | 49024325 | 49024404 |
Expression profiles
Bgee: expression breadth ubiquitous, 294 present calls, max score 99.26.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 148.5913 / max 657.4576, expressed in 1820 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 42191 | 140.1784 | 1820 |
| 42192 | 8.4128 | 1721 |
Top tissues by expression
295 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| left ovary | UBERON:0002119 | 99.26 | gold quality |
| body of pancreas | UBERON:0001150 | 99.17 | gold quality |
| cartilage tissue | UBERON:0002418 | 99.16 | gold quality |
| right ovary | UBERON:0002118 | 99.14 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 99.01 | gold quality |
| right uterine tube | UBERON:0001302 | 98.85 | gold quality |
| ovary | UBERON:0000992 | 98.80 | gold quality |
| gingival epithelium | UBERON:0001949 | 98.79 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 98.79 | gold quality |
| ventricular zone | UBERON:0003053 | 98.77 | gold quality |
| gingiva | UBERON:0001828 | 98.68 | gold quality |
| endocervix | UBERON:0000458 | 98.64 | gold quality |
| mammalian vulva | UBERON:0000997 | 98.56 | gold quality |
| skin of leg | UBERON:0001511 | 98.56 | gold quality |
| embryo | UBERON:0000922 | 98.55 | gold quality |
| skin of abdomen | UBERON:0001416 | 98.55 | gold quality |
| pancreas | UBERON:0001264 | 98.50 | gold quality |
| zone of skin | UBERON:0000014 | 98.46 | gold quality |
| ectocervix | UBERON:0012249 | 98.45 | gold quality |
| nipple | UBERON:0002030 | 98.35 | gold quality |
| body of uterus | UBERON:0009853 | 98.31 | gold quality |
| esophagus mucosa | UBERON:0002469 | 98.28 | gold quality |
| ganglionic eminence | UBERON:0004023 | 98.25 | gold quality |
| gastrocnemius | UBERON:0001388 | 98.20 | gold quality |
| penis | UBERON:0000989 | 98.18 | gold quality |
| upper leg skin | UBERON:0004262 | 98.17 | gold quality |
| rectum | UBERON:0001052 | 98.15 | gold quality |
| left uterine tube | UBERON:0001303 | 98.14 | gold quality |
| skin of hip | UBERON:0001554 | 98.13 | gold quality |
| islet of Langerhans | UBERON:0000006 | 98.06 | gold quality |
Single-cell (SCXA)
Detected in 14 experiment(s), a significant marker in 13.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-149689 | yes | 688.99 |
| E-HCAD-4 | yes | 77.91 |
| E-CURD-114 | yes | 68.36 |
| E-HCAD-6 | yes | 29.68 |
| E-HCAD-13 | yes | 26.68 |
| E-MTAB-9067 | yes | 20.90 |
| E-CURD-112 | yes | 19.46 |
| E-CURD-122 | yes | 17.74 |
| E-GEOD-125970 | yes | 17.20 |
| E-MTAB-10042 | yes | 14.32 |
| E-HCAD-1 | yes | 11.27 |
| E-MTAB-9801 | yes | 6.66 |
| E-MTAB-7008 | no | 472.75 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
4 targets.
| Target | Regulation |
|---|---|
| CCND1 | Activation |
| CDKN1A | Repression |
| CDKN1B | Repression |
| MKI67 | Activation |
Upstream regulators (CollecTRI, top): ATF2, EGR1, MYC, NR1I2, SP1, TFAP2A
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 48.5% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 40)
- Pharmacogenetic analysis of IMPDH II may represent a novel approach to mycophenolate mofetil therapeutic monitoring. (PMID:15621150)
- Nine genetic variants were identified in the IMPDH2 gene, with frequencies of the rarer alleles ranging from 0.5 to 10.2%. (PMID:17496727)
- IMPDH2 is a marker gene useful for stratifying osteosarcoma patients into low- and high-risk groups and predicting therapy outcome. (PMID:17660802)
- Mycophenolate mofetil up-regulates IMPDH-I and IMPDH-II mRNA in peripheral blood mononuclear cells. May predict acute rejection. (PMID:17713475)
- The effect of diabetes mellitus on mycophenolic acid pharmacokinetics and catalytic activity of inosine monophosphate dehydrogenase 2 was investigated in maintenance kidney transplant recipients. (PMID:18043470)
- The synthesis and activity of several novel inhibitors of IMPDH2 are reported. (PMID:18583139)
- Analysis of in vivo C-MYC interactions with TS, IMPDH2 and PRPS2 genes confirmed that they are direct C-MYC targets. (PMID:18677108)
- The expression of IMPDH2 in tumor tissue was significantly higher in patients with colorectal cancer than that in healthy subjects. (PMID:19597826)
- the IMPDH type II 3757T > C polymorphism is associated with an increased IMPDH activity in MMF-treated renal transplant patients (PMID:19617864)
- IMPDH2 genetic polymorphism was investigated in 96 individuals of Caucasian origin. (PMID:19810816)
- In this small sample of pediatric heart transplant patients receiving MMF, ABCC2, IMPDH1 and IMPDH2 SNPs were associated with MMF GI intolerance and bone marrow toxicity. (PMID:20061166)
- in the absence of ligand the mobilities of “flap” and “loop” regions of IMPDH-II (1B3O) structures are mostly controlled by the four (W 1, W 2, W 3, and W 4) conserved water molecular centers and their dynamics (PMID:20135634)
- Potential associations between the most frequent single nucleotide polymorphisms in both IMPDH genes and clinical outcome in renal transplant recipients. (PMID:20679962)
- resequenced IMPDH1 and IMPDH2 using DNA from 288 individuals from three ethnic groups and performed functional genomic studies of the sequence variants observed; identfied 25 SNPs, 24 novel, in IMPDH2 (PMID:20718729)
- IMPDH2 is directly involved in the development of chemoresistance in osteosarcoma cells (PMID:20808934)
- This ethnic-related data might contribute to a better understanding of the variability in clinical outcome and/or dose adjustments of drugs that are IMPDH inhibitors such as mycophenolic acid. (PMID:21181270)
- IMPDHII plays an important role in the negative regulation of TLR2 signaling by modulating PI3K activity. (PMID:21460227)
- the 3757C allele was associated with higher lymphocyte counts and a reduced incidence of lymphopenia among kidney allograft recipients (PMID:21996196)
- Anti-IMPDH2 may cause difficulties in interpretation of immunofluorescence patterns in routine autoantibody testing. (PMID:22029192)
- Role of salt bridge dynamics in inter domain recognition of human IMPDH isoforms: an insight to inhibitor topology for isoform-II. (PMID:22066532)
- An insight to the dynamics of conserved water-mediated salt bridge interaction and interdomain recognition in hIMPDH isoforms. (PMID:22928911)
- Rods and rings (RR) are protein assemblies composed of CTPS1 and IMPDH2. Glutamine deprivation initiates reversible assembly of mammalian rods and rings. (PMID:24477477)
- Compared with non-cancerous prostate tissues, IMPDH2 mRNA and protein expression levels were both significantly upregulated in prostate cancer tissues. (PMID:24659377)
- the localization of IMPDH2 inside the nucleus of human cells as well as the ultrastructure of R&R inclusions (PMID:24980853)
- Expression of IMPDH mRNA after mycophenolate administration in male volunteers. (PMID:25105143)
- IMPDH2 is directly involved in the development of chemoresistance and radioresistance in osteosarcoma cells. (PMID:25392102)
- The findings suggest that overexpressed IMPDH2 can be used as a biomarker for kidney and bladder cancer diagnosis and is a potential therapeutic target for the diseases (PMID:25465060)
- Rod and ring formation might be an adaptive homeostatic mechanism, allowing IMPDH to sense changes in the one-carbon folate pathway. (PMID:27343244)
- Taking together, these results indicate that natural product myricetin exhibits potent anti-leukemia activity by interfering with purine nucleotides biosynthetic pathway through the suppression of hIMPDH1/2 catalytic activity. (PMID:27378425)
- inosine-5’-monophosphate dehydrogenase 2 (IMPDH2) is an intracellular target of the PPIA-Sanglifehrin A binary complex. (PMID:28076787)
- Our study demonstrates IMPDH2 may be served as an independent prognostic biomarker for NPC patients, in which high IMPDH expression suggests poor prognosis of NPC patients. (PMID:28389646)
- association of T/C and C/C genotypes in the SNP rs11706052 (IMPDH2) with the occurrence of rejection episodes considering only patients who received immunosuppressive drug mycophenolate mofetil associated with cyclosporine or tacrolimus and corticoids, demonstrated association with a protection against rejection 15.6-fold (PMID:30442353)
- Study verified that overexpressing IMPDH2 could promote G1/S phase cell cycle transition through activation of PI3K/AKT/mTOR and PI3K/AKT/FOXO1 pathways and facilitate cell invasion, migration and EMT by regulating PI3K/AKT/mTOR pathway. (PMID:30518405)
- that upregulation of IMPDH2 is a prerequisite for the occurance of aberrant nucleolar function and increased anabolic processes in glioblastoma (PMID:31371825)
- Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation. (PMID:31999252)
- The expression and prognostic role of IMPDH2 in ovarian cancer. (PMID:32305001)
- Genetic variants in the glucocorticoid pathway genes and birth weight. (PMID:32886236)
- IMPDH2 and HPRT expression and a prognostic significance in preoperative and postoperative patients with osteosarcoma. (PMID:34035425)
- IMPDH2: a new gene associated with dominant juvenile-onset dystonia-tremor disorder. (PMID:34305140)
- Circular RNA circPFKP promotes cell proliferation by activating IMPDH2 in prostate cancer. (PMID:34673127)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | impdh2 | ENSDARG00000006900 |
| mus_musculus | Impdh2 | ENSMUSG00000062867 |
| rattus_norvegicus | Impdh2 | ENSRNOG00000031965 |
Paralogs (3): GMPR2 (ENSG00000100938), IMPDH1 (ENSG00000106348), GMPR (ENSG00000137198)
Protein
Protein identifiers
Inosine-5’-monophosphate dehydrogenase 2 — P12268 (reviewed: P12268)
Alternative names: Inosine-5’-monophosphate dehydrogenase type II
All UniProt accessions (8): A0A384N6C2, A0A7I2V2T3, A0A7I2V337, A0A7I2V5N6, A0A7I2YQK5, E7ETK5, P12268, H0Y4R1
UniProt curated annotations — full annotation on UniProt →
Function. Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Could also have a single-stranded nucleic acid-binding activity and could play a role in RNA and/or DNA metabolism. It may also have a role in the development of malignancy and the growth progression of some tumors.
Subunit / interactions. Homotetramer (PubMed:7903306, Ref.28, Ref.29). Interacts with CLOCK; in a circadian manner. Interacts with ANKRD9; leading to its ubiquitination and degradation by the proteasome.
Subcellular location. Cytoplasm. Nucleus. Cytosol.
Tissue specificity. IMPDH1 is the main species in normal leukocytes and IMPDH2 predominates over IMPDH1 in the tumor.
Post-translational modifications. Ubiquitinated leading to its degradation by the proteasome. The N-terminus is blocked. Acetylated by CLOCK in a circadian manner.
Activity regulation. Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH. Subject to product inhibition by XMP and NADH. Also inhibited by ADP.
Induction. Selectively up-regulated in neoplastic and replicating cells.
Pathway. Purine metabolism; XMP biosynthesis via de novo pathway; XMP from IMP: step 1/1.
Polymorphism. Genetic variants in the IMPDH2 gene are responsible for the large inter-individual variability in enzyme activity and may influence immunosuppressive efficacy and side effects in transplant recipients receiving mycophenolic acid [MIM:617995].
Miscellaneous. Because IMPDH activity is tightly linked with cell proliferation, it has been recognized as a target for cancer and viral chemotherapy and as a target for immunosuppressive drugs. The activities of the antitumor drug tiazofurin, the antiviral drug ribavirin, and the immunosuppressive drugs mizoribine and mycophenolic acid (MPA) are attributed to the inhibition of IMPDH. In addition, bacterial and parasitic IMPDH’s differ significantly from mammalian enzymes, which makes it a suitable target for anti-infective drugs.
Similarity. Belongs to the IMPDH/GMPR family.
RefSeq proteins (4): NP_000875, NP_001397688, NP_001397689, NP_001397690 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000644 | CBS_dom | Domain |
| IPR001093 | IMP_DH_GMPRt | Domain |
| IPR005990 | IMP_DH | Family |
| IPR013785 | Aldolase_TIM | Homologous_superfamily |
| IPR015875 | IMP_DH/GMP_Rdtase_CS | Conserved_site |
Pfam: PF00478, PF00571
Enzyme classification (BRENDA):
- EC 1.1.1.205 — IMP dehydrogenase (BRENDA: 70 organisms, 74 substrates, 895 inhibitors, 205 Km, 88 kcat entries)
Substrate kinetics (BRENDA)
12 substrates with measured Km, best-characterized 12. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| NAD+ | 0.0016–3.2 | 87 |
| IMP | 0.0033–0.315 | 46 |
| INOSINE 5’-PHOSPHATE | 0.0017–31 | 34 |
| THIAZOLE-4-CARBOXAMIDE ADENINE DINUCLEOTIDE | 0.59–1.03 | 6 |
| K+ | 2–17 | 4 |
| INOSINE 5’-DIPHOSPHATE | 0.0082–0.03 | 3 |
| 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE | 0.19–0.22 | 2 |
| 5’-AMINO-5’-DEOXYINOSINE 5’-N-PHOSPHATE | 0.038 | 1 |
| 5’-MERCAPTO-5’-DEOXYINOSINE 5’-S-PHOSPHATE | 0.013 | 1 |
| 6-THIO-IMP | 0.02 | 1 |
| ACETYLPYRIDINE ADENINE DINUCLEOTIDE | 0.19 | 1 |
| INOSINE 5’-PHOSPHOROTHIOATE | 0.21 | 1 |
Catalyzed reactions (Rhea), 1 shown:
- IMP + NAD(+) + H2O = XMP + NADH + H(+) (RHEA:11708)
UniProt features (88 total): strand 32, helix 21, binding site 13, turn 6, modified residue 5, cross-link 3, domain 2, active site 2, initiator methionine 1, chain 1, sequence variant 1, sequence conflict 1
Structure
Experimental structures (PDB)
25 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 9DMU | ELECTRON MICROSCOPY | 1.82 |
| 8FOZ | ELECTRON MICROSCOPY | 2 |
| 8FUZ | ELECTRON MICROSCOPY | 2.1 |
| 9MUC | ELECTRON MICROSCOPY | 2.1 |
| 9MUB | ELECTRON MICROSCOPY | 2.5 |
| 6I0M | X-RAY DIFFRACTION | 2.57 |
| 8G8F | ELECTRON MICROSCOPY | 2.6 |
| 6I0O | X-RAY DIFFRACTION | 2.62 |
| 1NF7 | X-RAY DIFFRACTION | 2.65 |
| 1B3O | X-RAY DIFFRACTION | 2.9 |
| 1NFB | X-RAY DIFFRACTION | 2.9 |
| 6UDP | ELECTRON MICROSCOPY | 2.95 |
| 8G9B | ELECTRON MICROSCOPY | 3 |
| 6U8E | ELECTRON MICROSCOPY | 3.03 |
| 6U8S | ELECTRON MICROSCOPY | 3.14 |
| 6UDO | ELECTRON MICROSCOPY | 3.21 |
| 6UDQ | ELECTRON MICROSCOPY | 3.27 |
| 6U8N | ELECTRON MICROSCOPY | 3.29 |
| 6U9O | ELECTRON MICROSCOPY | 3.36 |
| 6UA4 | ELECTRON MICROSCOPY | 3.65 |
| 6UA5 | ELECTRON MICROSCOPY | 3.79 |
| 6UAJ | ELECTRON MICROSCOPY | 3.84 |
| 6U8R | ELECTRON MICROSCOPY | 3.91 |
| 6UA2 | ELECTRON MICROSCOPY | 4.2 |
| 6UC2 | ELECTRON MICROSCOPY | 4.48 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P12268-F1 | 92.07 | 0.73 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 331 (thioimidate intermediate); 429 (proton acceptor)
Ligand- & substrate-binding residues (13): 329; 331 (in other chain); 364–366; 387–388; 411–415; 441; 500; 501; 502; 274–276; 324–326; 326 (in other chain) …
Post-translational modifications (8): 122, 160, 400, 416, 511, 195, 208, 438
Function
Pathways and Gene Ontology
Reactome pathways
14 pathways
| ID | Pathway |
|---|---|
| R-HSA-6798695 | Neutrophil degranulation |
| R-HSA-73817 | Purine ribonucleoside monophosphate biosynthesis |
| R-HSA-9679191 | Potential therapeutics for SARS |
| R-HSA-9748787 | Azathioprine ADME |
| R-HSA-1430728 | Metabolism |
| R-HSA-15869 | Metabolism of nucleotides |
| R-HSA-1643685 | Disease |
| R-HSA-168249 | Innate Immune System |
| R-HSA-168256 | Immune System |
| R-HSA-5663205 | Infectious disease |
| R-HSA-8956320 | Nucleotide biosynthesis |
| R-HSA-9679506 | SARS-CoV Infections |
| R-HSA-9748784 | Drug ADME |
| R-HSA-9824446 | Viral Infection Pathways |
MSigDB gene sets: 387 (showing top):
GOBP_CIRCADIAN_RHYTHM, MODULE_93, E2F_Q4_01, HORIUCHI_WTAP_TARGETS_DN, REACTOME_INNATE_IMMUNE_SYSTEM, SHIPP_DLBCL_VS_FOLLICULAR_LYMPHOMA_UP, WWTAAGGC_UNKNOWN, GRUETZMANN_PANCREATIC_CANCER_DN, GOBP_RESPONSE_TO_INTERLEUKIN_4, GOBP_RESPONSE_TO_PEPTIDE, MODULE_56, NKX25_02, GOCC_SECRETORY_GRANULE, MODULE_151, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS
GO Biological Process (7): GMP biosynthetic process (GO:0006177), GTP biosynthetic process (GO:0006183), circadian rhythm (GO:0007623), lymphocyte proliferation (GO:0046651), cellular response to interleukin-4 (GO:0071353), ‘de novo’ XMP biosynthetic process (GO:0097294), purine nucleotide biosynthetic process (GO:0006164)
GO Molecular Function (8): nucleotide binding (GO:0000166), DNA binding (GO:0003677), RNA binding (GO:0003723), IMP dehydrogenase activity (GO:0003938), metal ion binding (GO:0046872), catalytic activity (GO:0003824), protein binding (GO:0005515), oxidoreductase activity (GO:0016491)
GO Cellular Component (9): extracellular region (GO:0005576), nucleus (GO:0005634), cytoplasm (GO:0005737), peroxisomal membrane (GO:0005778), cytosol (GO:0005829), membrane (GO:0016020), secretory granule lumen (GO:0034774), extracellular exosome (GO:0070062), ficolin-1-rich granule lumen (GO:1904813)
Reactome top-level categories
Rollup of top-10 pathways:
| Category | Pathways |
|---|---|
| Innate Immune System | 1 |
| Nucleotide biosynthesis | 1 |
| SARS-CoV Infections | 1 |
| Drug ADME | 1 |
| Metabolism | 1 |
| Immune System | 1 |
| Disease | 1 |
| Metabolism of nucleotides | 1 |
| Viral Infection Pathways | 1 |
| Infectious disease | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| purine ribonucleotide biosynthetic process | 2 |
| nucleic acid binding | 2 |
| purine ribonucleoside monophosphate biosynthetic process | 1 |
| GMP metabolic process | 1 |
| purine ribonucleoside triphosphate biosynthetic process | 1 |
| GTP metabolic process | 1 |
| rhythmic process | 1 |
| mononuclear cell proliferation | 1 |
| lymphocyte activation | 1 |
| response to interleukin-4 | 1 |
| cellular response to cytokine stimulus | 1 |
| XMP biosynthetic process | 1 |
| purine nucleotide metabolic process | 1 |
| nucleotide biosynthetic process | 1 |
| purine-containing compound biosynthetic process | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 |
| cation binding | 1 |
| molecular_function | 1 |
| binding | 1 |
| catalytic activity | 1 |
| intracellular membrane-bounded organelle | 1 |
| intracellular anatomical structure | 1 |
| peroxisome | 1 |
| microbody membrane | 1 |
| cytoplasm | 1 |
| secretory granule | 1 |
| cytoplasmic vesicle lumen | 1 |
| extracellular vesicle | 1 |
| intracellular organelle lumen | 1 |
| ficolin-1-rich granule | 1 |
Protein interactions and networks
STRING
3842 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| IMPDH2 | GMPS | P49915 | 877 |
| IMPDH2 | CTPS1 | P17812 | 816 |
| IMPDH2 | ADSS2 | P30520 | 797 |
| IMPDH2 | P0DN79 | P0DN79 | 737 |
| IMPDH2 | ADSL | P30566 | 725 |
| IMPDH2 | APRT | P07741 | 673 |
| IMPDH2 | PPAT | Q06203 | 665 |
| IMPDH2 | ITPA | Q9BY32 | 657 |
| IMPDH2 | GART | P22102 | 648 |
| IMPDH2 | DHODH | Q02127 | 642 |
| IMPDH2 | ATIC | P31939 | 638 |
| IMPDH2 | HPRT1 | P00492 | 634 |
| IMPDH2 | PNP | P00491 | 625 |
| IMPDH2 | ADK | P55263 | 622 |
| IMPDH2 | GDA | Q9Y2T3 | 614 |
IntAct
189 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CDK2 | CCNE2 | psi-mi:“MI:0914”(association) | 0.940 |
| MAPK14 | RPS6KA4 | psi-mi:“MI:0914”(association) | 0.870 |
| XPC | PARP1 | psi-mi:“MI:0914”(association) | 0.730 |
| IMPDH2 | CPLANE2 | psi-mi:“MI:0915”(physical association) | 0.720 |
| CPLANE2 | IMPDH2 | psi-mi:“MI:0915”(physical association) | 0.720 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| IMPDH2 | STAT3 | psi-mi:“MI:0915”(physical association) | 0.670 |
| SH3KBP1 | USP27X | psi-mi:“MI:0914”(association) | 0.640 |
| NCBP2 | KPNA3 | psi-mi:“MI:0914”(association) | 0.640 |
| IMPDH2 | APIP | psi-mi:“MI:0915”(physical association) | 0.560 |
| APIP | IMPDH2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TAE1 | IMPDH2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| IMPDH2 | ISU1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| IMPDH2 | TRAF2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| IMPDH2 | IMPDH1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| IMPDH2 | POU6F2 | psi-mi:“MI:0915”(physical association) | 0.560 |
BioGRID (556): IMPDH2 (Affinity Capture-MS), IMPDH2 (Two-hybrid), APIP (Two-hybrid), RSG1 (Two-hybrid), IMPDH2 (Affinity Capture-MS), IMPDH2 (Affinity Capture-MS), IMPDH2 (Affinity Capture-MS), IMPDH1 (Affinity Capture-MS), SKP2 (Affinity Capture-MS), SMCR8 (Affinity Capture-MS), ANKRD9 (Affinity Capture-MS), PUSL1 (Affinity Capture-MS), ASUN (Co-fractionation), CD2AP (Co-fractionation), DDX3X (Co-fractionation)
ESM2 similar proteins: A0A0B5L585, A0JNA3, B0UXP9, D3ZLZ7, E9BDA8, E9PU28, F1DBB2, F6S675, F7CYY5, O00086, O14344, O33655, O93937, P07259, P07756, P12268, P12269, P20839, P21620, P24547, P31327, P38697, P39567, P47996, P50094, P50095, P50096, P50097, P50098, Q07152, Q12658, Q3SWY3, Q49729, Q4QEB3, Q4VRV8, Q4WHZ9, Q54P92, Q54QQ0, Q59Q46, Q5KP44
Diamond homologs: A0A0B5L585, A0JNA3, A7Z8C3, A9A5Y7, B0UXP9, B1L5U5, B9DP67, C0MAM1, D3ZLZ7, E9BDA8, E9PU28, F1DBB2, F6S675, F7CYY5, O00086, O14344, O42831, O50316, O58045, O67820, P0ADG7, P0ADG8, P0ADG9, P0C0H6, P0C0H7, P0DB88, P0DB89, P12268, P12269, P20839, P21620, P21879, P24547, P31002, P38697, P39567, P42851, P44334, P47996, P49058
SIGNOR signaling
14 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| IMPDH2 | “up-regulates quantity by expression” | CCND1 | “transcriptional regulation” |
| IMPDH2 | “up-regulates quantity by expression” | MKI67 | “transcriptional regulation” |
| IMPDH2 | “down-regulates quantity by repression” | CDKN1A | “transcriptional regulation” |
| IMPDH2 | “down-regulates quantity by repression” | CDKN1B | “transcriptional regulation” |
| IMPDH2 | “up-regulates activity” | AKT | binding |
| ribavirin | “down-regulates activity” | IMPDH2 | “chemical inhibition” |
| “Sanglifehrin A” | “down-regulates activity” | IMPDH2 | “chemical inhibition” |
| Merimepodib | “down-regulates activity” | IMPDH2 | “chemical inhibition” |
| IMPDH2 | “down-regulates quantity” | IMP | “chemical modification” |
| IMPDH2 | “up-regulates quantity” | “5’-xanthylic acid” | “chemical modification” |
| MYC | “up-regulates quantity by expression” | IMPDH2 | “transcriptional regulation” |
| “mycophenolic acid” | “down-regulates activity” | IMPDH2 | “chemical inhibition” |
| AKT1 | “up-regulates activity” | IMPDH2 | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 183 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| stress granule assembly | 5 | 18.6× | 5e-03 |
| positive regulation of axon extension | 5 | 15.8× | 6e-03 |
| DNA damage response | 14 | 4.6× | 3e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
96 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 4 |
| Uncertain significance | 68 |
| Likely benign | 3 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (4)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1164002 | NM_000884.3(IMPDH2):c.93_96del (p.Tyr32fs) | Likely pathogenic |
| 1803982 | NM_000884.3(IMPDH2):c.338G>A (p.Gly113Glu) | Likely pathogenic |
| 1966023 | NM_000884.3(IMPDH2):c.713A>G (p.Lys238Arg) | Likely pathogenic |
| 3383473 | NM_000884.3(IMPDH2):c.619G>A (p.Gly207Arg) | Likely pathogenic |
SpliceAI
2191 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 3:49024574:TGGCT:T | acceptor_gain | 1.0000 |
| 3:49024577:CT:C | acceptor_gain | 1.0000 |
| 3:49024578:TC:T | acceptor_loss | 1.0000 |
| 3:49024579:C:CC | acceptor_gain | 1.0000 |
| 3:49024579:C:T | acceptor_loss | 1.0000 |
| 3:49024657:A:AC | donor_gain | 1.0000 |
| 3:49024658:C:CC | donor_gain | 1.0000 |
| 3:49024658:CCGGA:C | donor_gain | 1.0000 |
| 3:49024798:CTTCA:C | acceptor_gain | 1.0000 |
| 3:49024800:TCA:T | acceptor_gain | 1.0000 |
| 3:49024800:TCAC:T | acceptor_loss | 1.0000 |
| 3:49024801:CA:C | acceptor_gain | 1.0000 |
| 3:49024801:CAC:C | acceptor_gain | 1.0000 |
| 3:49024803:C:CC | acceptor_gain | 1.0000 |
| 3:49024803:C:CG | acceptor_loss | 1.0000 |
| 3:49024891:CCCA:C | donor_loss | 1.0000 |
| 3:49024892:CCA:C | donor_loss | 1.0000 |
| 3:49024894:A:T | donor_loss | 1.0000 |
| 3:49024904:T:C | donor_gain | 1.0000 |
| 3:49025036:CATGA:C | acceptor_gain | 1.0000 |
| 3:49025037:ATGA:A | acceptor_gain | 1.0000 |
| 3:49025038:TGA:T | acceptor_gain | 1.0000 |
| 3:49025039:GA:G | acceptor_gain | 1.0000 |
| 3:49025040:AC:A | acceptor_loss | 1.0000 |
| 3:49025041:C:CC | acceptor_gain | 1.0000 |
| 3:49025041:C:CG | acceptor_loss | 1.0000 |
| 3:49025042:T:C | acceptor_loss | 1.0000 |
| 3:49025044:C:CT | acceptor_gain | 1.0000 |
| 3:49025048:C:CT | acceptor_gain | 1.0000 |
| 3:49025121:CTCA:C | donor_loss | 1.0000 |
AlphaMissense
3381 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 3:49024773:C:T | G442E | 1.000 |
| 3:49024774:C:G | G442R | 1.000 |
| 3:49024774:C:T | G442R | 1.000 |
| 3:49024949:C:A | M414I | 1.000 |
| 3:49024949:C:G | M414I | 1.000 |
| 3:49024949:C:T | M414I | 1.000 |
| 3:49024964:C:A | K409N | 1.000 |
| 3:49024964:C:G | K409N | 1.000 |
| 3:49025182:C:T | G365E | 1.000 |
| 3:49026337:G:C | C331W | 1.000 |
| 3:49026848:C:G | A220P | 1.000 |
| 3:49026880:A:G | L209S | 1.000 |
| 3:49027759:C:A | R161M | 1.000 |
| 3:49027774:C:T | G156D | 1.000 |
| 3:49027775:C:G | G156R | 1.000 |
| 3:49027824:G:C | F139L | 1.000 |
| 3:49027824:G:T | F139L | 1.000 |
| 3:49027826:A:G | F139L | 1.000 |
| 3:49027899:G:C | F114L | 1.000 |
| 3:49027899:G:T | F114L | 1.000 |
| 3:49027901:A:G | F114L | 1.000 |
| 3:49024517:C:G | G501R | 0.999 |
| 3:49024710:C:T | G463D | 0.999 |
| 3:49024711:C:G | G463R | 0.999 |
| 3:49024719:A:G | L460P | 0.999 |
| 3:49024764:C:T | G445D | 0.999 |
| 3:49024779:G:T | A440D | 0.999 |
| 3:49024903:A:G | Y430H | 0.999 |
| 3:49024948:C:G | G415R | 0.999 |
| 3:49024950:A:G | M414T | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000245176 (3:49027122 G>T), RS1002423663 (3:49026858 A>G,T), RS1002729214 (3:49028476 A>G), RS1002784462 (3:49024589 G>A,C), RS1002815120 (3:49024927 T>C), RS1002853413 (3:49031227 A>C), RS1003326765 (3:49029536 G>A,C,T), RS1003518601 (3:49025837 G>A), RS1003573887 (3:49030127 G>A,C), RS1003579148 (3:49029689 A>G,T), RS1004472994 (3:49028218 G>A,T), RS1005539460 (3:49026046 C>G), RS1005979311 (3:49031185 T>C), RS1006378892 (3:49030959 C>G), RS1006463705 (3:49024914 C>T)
Disease associations
OMIM: gene MIM:146691 | disease phenotypes:
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| neurodevelopmental disorder | Strong | Autosomal dominant |
Mondo (2): dystonic disorder (MONDO:0003441), neurodevelopmental disorder (MONDO:0700092)
Orphanet (0):
HPO phenotypes
34 total (30 of 34 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000365 | Hearing impairment |
| HP:0000473 | Torticollis |
| HP:0000666 | Horizontal nystagmus |
| HP:0000716 | Depression |
| HP:0000722 | Compulsive behaviors |
| HP:0000739 | Anxiety |
| HP:0000821 | Hypothyroidism |
| HP:0000822 | Hypertension |
| HP:0001249 | Intellectual disability |
| HP:0001251 | Ataxia |
| HP:0001300 | Parkinsonism |
| HP:0001348 | Brisk reflexes |
| HP:0001370 | Rheumatoid arthritis |
| HP:0001761 | Pes cavus |
| HP:0001762 | Talipes equinovarus |
| HP:0002063 | Rigidity |
| HP:0002066 | Gait ataxia |
| HP:0002067 | Bradykinesia |
| HP:0002071 | Abnormality of extrapyramidal motor function |
| HP:0002166 | Impaired vibration sensation in the lower limbs |
| HP:0002174 | Postural tremor |
| HP:0002360 | Sleep disturbance |
| HP:0002395 | Lower limb hyperreflexia |
| HP:0002451 | Limb dystonia |
| HP:0002601 | Paresis of extensor muscles of the big toe |
| HP:0002650 | Scoliosis |
| HP:0003487 | Babinski sign |
| HP:0003785 | Decreased CSF homovanillic acid concentration |
| HP:0004373 | Focal dystonia |
| HP:0005876 | Progressive flexion contractures |
GWAS associations
14 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST004131_23 | Inflammatory bowel disease | 1.000000e-33 |
| GCST004132_17 | Crohn’s disease | 3.000000e-23 |
| GCST004133_11 | Ulcerative colitis | 8.000000e-20 |
| GCST007294_107 | Body fat distribution (trunk fat ratio) | 9.000000e-06 |
| GCST007294_72 | Body fat distribution (trunk fat ratio) | 1.000000e-18 |
| GCST007294_98 | Body fat distribution (trunk fat ratio) | 3.000000e-15 |
| GCST007295_21 | Body fat distribution (leg fat ratio) | 8.000000e-06 |
| GCST007295_45 | Body fat distribution (leg fat ratio) | 1.000000e-10 |
| GCST007295_80 | Body fat distribution (leg fat ratio) | 1.000000e-14 |
| GCST010698_80 | Subcortical volume (min-P) | 3.000000e-24 |
| GCST010699_110 | Brain morphology (min-P) | 4.000000e-08 |
| GCST010701_52 | Cortical surface area (MOSTest) | 1.000000e-16 |
| GCST010702_36 | Subcortical volume (MOSTest) | 1.000000e-10 |
| GCST010703_262 | Brain morphology (MOSTest) | 2.000000e-13 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004341 | body fat distribution |
| EFO:0004346 | neuroimaging measurement |
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D020821 | Dystonic Disorders | C10.228.662.300 |
| D065886 | Neurodevelopmental Disorders | F03.625 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL2002 (SINGLE PROTEIN), CHEMBL2111369 (PROTEIN FAMILY)
Molecules with ChEMBL bioactivity
2 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 88,232 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL866 | MYCOPHENOLIC ACID | 4 | 87,659 |
| CHEMBL304087 | MERIMEPODIB | 2 | 573 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
2 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs11706052 | Efficacy,Toxicity | 4 | mycophenolate mofetil;mycophenolic acid | Kidney Transplantation |
| rs11706052 | Efficacy | 4 | cyclosporine;mycophenolate mofetil | Kidney Transplantation |
PharmGKB variants
3 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs470119 | IMPDH2, TYMP | 0.00 | 0 | ||
| rs11706052 | DALRD3, IMPDH2, MIR191, MIR425 | 4 | -3.00 | 2 | cyclosporine;mycophenolate mofetil;mycophenolate mofetil;mycophenolic acid |
| rs121434586 | IMPDH2 | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — 1.-.-.- Oxidoreductases
Most potent curated ligand interactions (3 total), top 3:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| merimepodib | Inhibition | 8.0 | pIC50 |
| mycophenolic acid | Inhibition | 7.7 | pIC50 |
| ribavirin | Inhibition | 6.0 | pIC50 |
Binding affinities (BindingDB)
39 measured of 90 human assays (90 total across all organisms); most potent 39 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| ({[(2R,3S,4R,5R)-5-(6-amino-2-ethyl-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxyphosphinic acid | KI | 1 nM |
| VX-497 (2) | IC50 | 3.5 nM |
| {[(2R,3S,4R,5R)-5-(4-carbamoyl-1,3-thiazol-2-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}[({[(2R,3S,4R,5R)-5-(2,6-diamino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphinic acid | KI | 7 nM |
| N-{2-[3-(dimethylsulfamoyl)phenyl]propan-2-yl}-2-fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 7.9 nM |
| ({[(2R,3S,4R,5R)-5-(6-amino-2-ethynyl-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxyphosphinic acid | KI | 10 nM |
| N-{2-[4-(dimethylsulfamoyl)phenyl]propan-2-yl}-2-fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 10 nM |
| 2-fluoro-9-oxo-N-(2-phenylpropan-2-yl)-9,10-dihydroacridine-3-carboxamide | IC50 | 11 nM |
| 2-fluoro-9-oxo-N-[2-(pyridin-3-yl)propan-2-yl]-9,10-dihydroacridine-3-carboxamide | IC50 | 11 nM |
| 2-fluoro-N-{2-[5-methyl-6-(morpholin-4-yl)pyridin-3-yl]propan-2-yl}-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 11 nM |
| 2-fluoro-N-[2-(4-methanesulfonylphenyl)propan-2-yl]-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 12 nM |
| 2-fluoro-N-[2-(3-methanesulfonylphenyl)propan-2-yl]-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 12 nM |
| N-{2-[2-(dimethylamino)pyridin-4-yl]propan-2-yl}-2-fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 14 nM |
| [({[(2R,3S,4R,5R)-5-(6-amino-2-ethyl-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)methyl][2-(4-hydroxy-6-methoxy-7-methyl-3-oxo-1,3-dihydro-2-benzofuran-5-yl)ethoxy]phosphinic acid | KI | 16 nM |
| 2-fluoro-9-oxo-N-(2-{2H,3H,4H-pyrido[3,2-b][1,4]oxazin-7-yl}propan-2-yl)-9,10-dihydroacridine-3-carboxamide | IC50 | 17 nM |
| Acridone-Based Inhibitor, 4m | IC50 | 17 nM |
| ({[(2R,3S,4R,5R)-5-(6-amino-2-iodo-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxyphosphinic acid | KI | 19 nM |
| 9-oxo-N-(2-phenylpropan-2-yl)-9,10-dihydroacridine-3-carboxamide | IC50 | 19 nM |
| ({[(2R,3S,4R,5R)-5-(6-amino-2-phenyl-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxyphosphinic acid | KI | 20 nM |
| N-(2-{4-[2-(dimethylamino)ethoxy]phenyl}propan-2-yl)-2-fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 20 nM |
| 2-fluoro-N-{2-[6-(morpholin-4-yl)pyridin-3-yl]propan-2-yl}-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 20 nM |
| 2-fluoro-N-{2-[5-methoxy-6-(morpholin-4-yl)pyridin-3-yl]propan-2-yl}-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 20 nM |
| N-{2-[6-(dimethylamino)pyridin-3-yl]propan-2-yl}-2-fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 22 nM |
| 2-fluoro-N-[2-(6-methylpyridin-3-yl)propan-2-yl]-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 23 nM |
| 2-fluoro-9-oxo-N-[2-(pyridin-2-yl)propan-2-yl]-9,10-dihydroacridine-3-carboxamide | IC50 | 29 nM |
| 9-oxo-N-[2-(pyridin-3-yl)propan-2-yl]-9,10-dihydroacridine-3-carboxamide | IC50 | 42 nM |
| ({[(2R,3S,4R,5R)-5-[6-amino-2-(phenylamino)-9H-purin-9-yl]-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxyphosphinic acid | KI | 45 nM |
| ({[(2R,3S,4R,5R)-5-[6-amino-2-(benzylamino)-9H-purin-9-yl]-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxyphosphinic acid | KI | 45 nM |
| 9-oxo-N-[2-(pyridin-2-yl)propan-2-yl]-9,10-dihydroacridine-3-carboxamide | IC50 | 53 nM |
| 9-oxo-N-[2-(pyridin-4-yl)propan-2-yl]-9,10-dihydroacridine-3-carboxamide | IC50 | 53 nM |
| ethyl 9-oxo-9,10-dihydroacridine-3-carboxylate | IC50 | 59 nM |
| N-tert-butyl-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 59 nM |
| [({[(2R,3S,4R,5R)-5-(6-amino-2-phenyl-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)methyl][2-(4-hydroxy-6-methoxy-7-methyl-3-oxo-1,3-dihydro-2-benzofuran-5-yl)ethoxy]phosphinic acid | KI | 66 nM |
| ({[(2R,3S,4R,5R)-5-{6-amino-2-[(2-phenylethyl)amino]-9H-purin-9-yl}-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxyphosphinic acid | KI | 73 nM |
| 9-oxo-N-[(1R)-1-phenylethyl]-9,10-dihydroacridine-3-carboxamide | IC50 | 95 nM |
| ({[(2R,3S,4R,5R)-5-(6-amino-2-ethenyl-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxyphosphinic acid | KI | 96 nM |
| NSC 358285 | KI | 110 nM |
| [({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)methyl][2-(4-hydroxy-6-methoxy-7-methyl-3-oxo-1,3-dihydro-2-benzofuran-5-yl)ethoxy]phosphinic acid | KI | 330 nM |
| 9-oxo-N-[(1S)-1-phenylethyl]-9,10-dihydroacridine-3-carboxamide | IC50 | 431 nM |
| N-benzyl-9-oxo-9,10-dihydroacridine-3-carboxamide | IC50 | 2200 nM |
ChEMBL bioactivities
676 potent at pChembl≥5 of 729 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
PubChem BioAssay actives
730 with measured affinity, of 1482 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| oxolan-3-yl N-[[3-[[3-methoxy-4-(1,3-oxazol-5-yl)phenyl]carbamoylamino]phenyl]methyl]carbamate | 1803439: Enzyme Assay from Article 10.3109/14756366.2013.793184: “Design, synthesis and biological evaluation of novel inosine 5’-monophosphate dehydrogenase (IMPDH) inhibitors.” | ic50 | 0.0035 | uM |
| 7-methoxy-2-[4-methyl-3-(oxolan-2-ylmethoxy)phenyl]-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0050 | uM |
| 7-methoxy-2-[4-methyl-3-(2-morpholin-4-ylethoxy)phenyl]-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0050 | uM |
| 7-methoxy-2-(4-methoxyphenyl)-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92624: Inhibition of human inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0050 | uM |
| 7-methoxy-2-(3-methylphenyl)-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92624: Inhibition of human inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0050 | uM |
| 2-(3,4-dimethylphenyl)-7-methoxy-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92624: Inhibition of human inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0050 | uM |
| 2-(4-bromophenyl)-7-methoxy-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92624: Inhibition of human inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0050 | uM |
| 7-methoxy-2-(4-methyl-3-morpholin-4-ylphenyl)-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0050 | uM |
| 2-[3-(dimethylamino)-2,3-dihydro-1H-inden-5-yl]-7-methoxy-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0050 | uM |
| N-isoquinolin-6-yl-5-phenyl-1,3-oxazol-2-amine | 3134: Inhibitory activity against inosine 5’-inosine monophosphate dehydrogenase type II (IMPDH II) | ic50 | 0.0050 | uM |
| 7-methoxy-2-(4-methylphenyl)-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92624: Inhibition of human inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0050 | uM |
| 2-[3-(azetidin-1-yl)-2,3-dihydro-1H-inden-5-yl]-7-methoxy-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0060 | uM |
| [(2R)-1-cyanobutan-2-yl] N-[[3-[(4-cyano-3-methoxyphenyl)carbamoylamino]phenyl]methyl]carbamate | 92742: Inhibitory activity tested against inosine-5’-monophosphate dehydrogenase 2 (IMPDH-II) enzyme | ic50 | 0.0060 | uM |
| Mycophenolic Acid | 92748: Inhibitory activity against human Inosine-5’-monophosphate dehydrogenase 2 (IMPDH type II isoform); Range is 6-10 nM | ki | 0.0060 | uM |
| [2-[N-methyl-2-[2-[[3-(1,3-oxazol-5-yl)-1H-indol-6-yl]amino]-1,3-oxazol-5-yl]anilino]-2-oxoethyl] acetate | 92742: Inhibitory activity tested against inosine-5’-monophosphate dehydrogenase 2 (IMPDH-II) enzyme | ic50 | 0.0070 | uM |
| [(3S)-oxolan-3-yl] N-[[3-[[3-methoxy-4-(1,3-oxazol-5-yl)phenyl]carbamoylamino]phenyl]methyl]carbamate | 93053: Inhibition of inositol-5-monophosphate dehydrogenase (IMPDH); range 7-8 nM | ic50 | 0.0070 | uM |
| (2S)-2-[(2E)-2-[2-(4-amino-6-methoxy-7-methyl-3-oxo-1H-2-benzofuran-5-yl)ethylidene]cyclopentyl]propanoic acid | 93053: Inhibition of inositol-5-monophosphate dehydrogenase (IMPDH); range 7-8 nM | ic50 | 0.0070 | uM |
| 7-methoxy-6-(1,3-oxazol-5-yl)-2-phenyl-1H-quinolin-4-one | 92750: Inhibitory activity against IMPDH II with respect to IMP and NAD | ki | 0.0070 | uM |
| N-[2-[3-(dimethylsulfamoyl)phenyl]propan-2-yl]-2-fluoro-9-oxo-10H-acridine-3-carboxamide | 1797842: IMPDH2 Enzyme Inhibition and Human T-Lymphoblast (CEM) Proliferation Inhibition Assays from Article 10.1021/jm070299x: “Acridone-based inhibitors of inosine 5’-monophosphate dehydrogenase: discovery and SAR leading to the identification of N-(2-(6-(4-ethylpiperazin-1-yl)pyridin-3-yl)propan-2-yl)-2- fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide (BMS-566419).” | ic50 | 0.0079 | uM |
| (E)-6-(6-ethenyl-4-hydroxy-7-methyl-3-oxo-1H-2-benzofuran-5-yl)-4-methylhex-4-enoic acid | 92618: Inhibition of human recombinant inosine monophosphate dehydrogenase type II. | ic50 | 0.0085 | uM |
| 7-methoxy-6-(1,3-oxazol-5-yl)-2-thiophen-3-yl-1H-quinolin-4-one | 92624: Inhibition of human inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0090 | uM |
| N-[2-[4-(dimethylsulfamoyl)phenyl]propan-2-yl]-2-fluoro-9-oxo-10H-acridine-3-carboxamide | 1797842: IMPDH2 Enzyme Inhibition and Human T-Lymphoblast (CEM) Proliferation Inhibition Assays from Article 10.1021/jm070299x: “Acridone-based inhibitors of inosine 5’-monophosphate dehydrogenase: discovery and SAR leading to the identification of N-(2-(6-(4-ethylpiperazin-1-yl)pyridin-3-yl)propan-2-yl)-2- fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide (BMS-566419).” | ic50 | 0.0100 | uM |
| 7-methoxy-6-(1,3-oxazol-5-yl)-2-(8-oxo-6,7-dihydro-5H-naphthalen-2-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0100 | uM |
| N’-tert-butyl-N-[3-methoxy-4-(1,3-oxazol-5-yl)phenyl]oxamide | 92613: Inhibition of inosine-5’-monophosphate dehydrogenase 2. | ic50 | 0.0100 | uM |
| [6-[7-methoxy-6-(1,3-oxazol-5-yl)-4-oxo-1H-quinolin-2-yl]-2,3-dihydro-1H-inden-1-yl] N,N-dimethylcarbamate | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0110 | uM |
| 2-fluoro-9-oxo-N-(2-phenylpropan-2-yl)-10H-acridine-3-carboxamide | 1797842: IMPDH2 Enzyme Inhibition and Human T-Lymphoblast (CEM) Proliferation Inhibition Assays from Article 10.1021/jm070299x: “Acridone-based inhibitors of inosine 5’-monophosphate dehydrogenase: discovery and SAR leading to the identification of N-(2-(6-(4-ethylpiperazin-1-yl)pyridin-3-yl)propan-2-yl)-2- fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide (BMS-566419).” | ic50 | 0.0110 | uM |
| 2-fluoro-9-oxo-N-(2-pyridin-3-ylpropan-2-yl)-10H-acridine-3-carboxamide | 1797842: IMPDH2 Enzyme Inhibition and Human T-Lymphoblast (CEM) Proliferation Inhibition Assays from Article 10.1021/jm070299x: “Acridone-based inhibitors of inosine 5’-monophosphate dehydrogenase: discovery and SAR leading to the identification of N-(2-(6-(4-ethylpiperazin-1-yl)pyridin-3-yl)propan-2-yl)-2- fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide (BMS-566419).” | ic50 | 0.0110 | uM |
| 2-fluoro-N-[2-(5-methyl-6-morpholin-4-yl-3-pyridinyl)propan-2-yl]-9-oxo-10H-acridine-3-carboxamide | 1797842: IMPDH2 Enzyme Inhibition and Human T-Lymphoblast (CEM) Proliferation Inhibition Assays from Article 10.1021/jm070299x: “Acridone-based inhibitors of inosine 5’-monophosphate dehydrogenase: discovery and SAR leading to the identification of N-(2-(6-(4-ethylpiperazin-1-yl)pyridin-3-yl)propan-2-yl)-2- fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide (BMS-566419).” | ic50 | 0.0110 | uM |
| 1-(4-methylphenyl)-3-[3-(1,3-oxazol-5-yl)-1H-indol-6-yl]urea | 92742: Inhibitory activity tested against inosine-5’-monophosphate dehydrogenase 2 (IMPDH-II) enzyme | ic50 | 0.0110 | uM |
| N-[2-[2-[3-methoxy-4-(1,3-oxazol-5-yl)anilino]-1,3-oxazol-5-yl]phenyl]-N-methyl-2-pyrazol-1-ylacetamide | 92622: Inhibition of human inosine-5’-monophosphate dehydrogenase 2 | ic50 | 0.0110 | uM |
| 7-methoxy-2-[3-(methylamino)-2,3-dihydro-1H-inden-5-yl]-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0120 | uM |
| 2-methoxy-N-[6-[7-methoxy-6-(1,3-oxazol-5-yl)-4-oxo-1H-quinolin-2-yl]-2,3-dihydro-1H-inden-1-yl]-N-methylacetamide | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0120 | uM |
| 2-fluoro-N-[2-(3-methylsulfonylphenyl)propan-2-yl]-9-oxo-10H-acridine-3-carboxamide | 1797842: IMPDH2 Enzyme Inhibition and Human T-Lymphoblast (CEM) Proliferation Inhibition Assays from Article 10.1021/jm070299x: “Acridone-based inhibitors of inosine 5’-monophosphate dehydrogenase: discovery and SAR leading to the identification of N-(2-(6-(4-ethylpiperazin-1-yl)pyridin-3-yl)propan-2-yl)-2- fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide (BMS-566419).” | ic50 | 0.0120 | uM |
| 2-fluoro-N-[2-(4-methylsulfonylphenyl)propan-2-yl]-9-oxo-10H-acridine-3-carboxamide | 1797842: IMPDH2 Enzyme Inhibition and Human T-Lymphoblast (CEM) Proliferation Inhibition Assays from Article 10.1021/jm070299x: “Acridone-based inhibitors of inosine 5’-monophosphate dehydrogenase: discovery and SAR leading to the identification of N-(2-(6-(4-ethylpiperazin-1-yl)pyridin-3-yl)propan-2-yl)-2- fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide (BMS-566419).” | ic50 | 0.0120 | uM |
| N-[2-[2-[3-methoxy-4-(1,3-oxazol-5-yl)anilino]-1,3-oxazol-5-yl]phenyl]-N-methyl-2-morpholin-4-ylacetamide | 92622: Inhibition of human inosine-5’-monophosphate dehydrogenase 2 | ic50 | 0.0120 | uM |
| (E)-6-(6-ethyl-4-hydroxy-7-methyl-3-oxo-1H-2-benzofuran-5-yl)-4-methylhex-4-enoic acid | 92618: Inhibition of human recombinant inosine monophosphate dehydrogenase type II. | ic50 | 0.0126 | uM |
| (E)-N-[(2R)-1-[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methylamino]-1-oxo-3-phenylpropan-2-yl]-6-(4-hydroxy-6-methoxy-7-methyl-3-oxo-1H-2-benzofuran-5-yl)-4-methylhex-4-enamide | 1060471: Inhibition of IMPDH2 (unknown origin) | ki | 0.0126 | uM |
| 7-methoxy-6-(1,3-oxazol-5-yl)-2-(3-pyrrolidin-1-yl-2,3-dihydro-1H-inden-5-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0130 | uM |
| 7-methoxy-6-(1,3-oxazol-5-yl)-3-(2-pyridin-4-ylethyl)-2-sulfanylidene-1H-quinazolin-4-one | 241614: In vitro inhibitory concentration against inosine-5’-monophosphate dehydrogenase | ic50 | 0.0130 | uM |
| 2-[[(E)-4-(6-ethyl-4-hydroxy-7-methyl-3-oxo-1H-2-benzofuran-5-yl)-2-methylbut-2-enyl]amino]ethylphosphonic acid | 267726: Inhibition of human IMPDH2 | ic50 | 0.0130 | uM |
| N-[2-[2-[3-methoxy-4-(1,3-oxazol-5-yl)anilino]-1,3-oxazol-5-yl]phenyl]-N-methyl-2-(1,2,4-triazol-1-yl)acetamide | 92622: Inhibition of human inosine-5’-monophosphate dehydrogenase 2 | ic50 | 0.0130 | uM |
| N-[2-[2-[3-methoxy-4-(1,3-oxazol-5-yl)anilino]-1,3-oxazol-5-yl]phenyl]-N-methyl-3-morpholin-4-ylpropanamide | 92622: Inhibition of human inosine-5’-monophosphate dehydrogenase 2 | ic50 | 0.0130 | uM |
| 2-(4-acetyl-2,3-dihydro-1,4-benzoxazin-6-yl)-7-methoxy-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0140 | uM |
| N-[2-[2-(dimethylamino)-4-pyridinyl]propan-2-yl]-2-fluoro-9-oxo-10H-acridine-3-carboxamide | 1797842: IMPDH2 Enzyme Inhibition and Human T-Lymphoblast (CEM) Proliferation Inhibition Assays from Article 10.1021/jm070299x: “Acridone-based inhibitors of inosine 5’-monophosphate dehydrogenase: discovery and SAR leading to the identification of N-(2-(6-(4-ethylpiperazin-1-yl)pyridin-3-yl)propan-2-yl)-2- fluoro-9-oxo-9,10-dihydroacridine-3-carboxamide (BMS-566419).” | ic50 | 0.0140 | uM |
| [[(2R,3S,4R,5R)-5-(6-amino-2-ethylpurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] [(2R,3S,4R,5R)-5-(4-carbamoyl-1,3-thiazol-2-yl)-3,4-dihydroxyoxolan-2-yl]methyl hydrogen phosphate | 1797841: IMPDH Type 2 Enzyme Assay from Article 10.1021/jm070568j: “Probing Binding Requirements of Type I and Type II Isoforms of Inosine Monophosphate Dehydrogenase with Adenine-Modified Nicotinamide Adenine Dinucleotide Analogues.” | ki | 0.0140 | uM |
| [[(2S,3R,4S,5S)-5-(6-amino-2-ethylpurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] [(2R,3S,4R,5R)-5-(4-carbamoyl-1,3-thiazol-2-yl)-3,4-dihydroxyoxolan-2-yl]methyl hydrogen phosphate | 580126: Inhibition of human IMPDH2 by Spectrophotometer | ki | 0.0140 | uM |
| [(2R,3S,4R,5R)-5-(6-amino-2-pyridin-4-ylpurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-[[hydroxy-[2-(4-hydroxy-6-methoxy-7-methyl-3-oxo-1H-2-benzofuran-5-yl)ethoxy]phosphoryl]methyl]phosphinic acid | 1060471: Inhibition of IMPDH2 (unknown origin) | ki | 0.0140 | uM |
| 7-methoxy-2-(2-methyl-1,3-dihydroisoindol-5-yl)-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0140 | uM |
| 2-[(2R,3R)-3-(dimethylamino)-2-methoxy-2,3-dihydro-1H-inden-5-yl]-7-methoxy-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0150 | uM |
| 2-[8-(dimethylamino)-5,6,7,8-tetrahydronaphthalen-2-yl]-7-methoxy-6-(1,3-oxazol-5-yl)-1H-quinolin-4-one | 92740: Inhibitory activity against inosine monophosphate dehydrogenase IMPDH II | ic50 | 0.0150 | uM |
CTD chemical–gene interactions
78 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | increases abundance, increases expression, affects binding, increases reaction, decreases expression | 4 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 2 |
| bisphenol S | increases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, decreases expression | 2 |
| Tretinoin | increases expression, decreases expression | 2 |
| Valproic Acid | decreases expression, increases methylation | 2 |
| Genistein | increases expression | 2 |
| Particulate Matter | decreases expression, increases abundance | 2 |
| aristolochic acid I | increases expression | 1 |
| FR900359 | affects phosphorylation | 1 |
| bisphenol F | increases expression | 1 |
| TAK-243 | increases sumoylation | 1 |
| 2,4,6-tribromophenol | increases expression | 1 |
| methylmercuric chloride | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| bisphenol A | increases expression | 1 |
| chlorophyllin | decreases expression | 1 |
| sodium arsenate | decreases expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| oridonin | decreases activity | 1 |
| beta-lapachone | decreases expression | 1 |
| o,p’-DDT | increases expression | 1 |
| tetrabromobisphenol A | increases expression | 1 |
| tanshinone | decreases activity | 1 |
| perfluorooctanoic acid | increases expression | 1 |
| ochratoxin A | increases expression | 1 |
| periodate-oxidized adenosine | affects expression | 1 |
| cupric chloride | decreases expression | 1 |
| microcystin RR | increases expression | 1 |
| chloropicrin | increases expression | 1 |
ChEMBL screening assays
111 unique, capped per target: 104 binding, 6 functional, 1 admet
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1032990 | Binding | Inhibition of human recombinant IMPDH2 expressed in Escherichia coli guaB assessed as NADH production by fluorescence assay | Triazole inhibitors of Cryptosporidium parvum inosine 5’-monophosphate dehydrogenase. — J Med Chem |
| CHEMBL4676180 | ADMET | Inhibition of human IMPDH2 expressed in Escherichia coli assessed as apparent inhibition constant using NAD as substrate by fluorescence assay | Mycophenolic anilides as broad specificity inosine-5’-monophosphate dehydrogenase (IMPDH) inhibitors. — Bioorg Med Chem Lett |
| CHEMBL699978 | Functional | Compound was tested for its effect on IMPDH (Inosine 5`-monophosphate dehydrogenase) activity in K562 cells | Synthesis, structure, and antiproliferative activity of selenophenfurin, an inosine 5’-monophosphate dehydrogenase inhibitor analogue of selenazofurin. — J Med Chem |
Cellosaurus cell lines
4 cell lines: 4 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_C8FK | HAP1 IMPDH2 (-) 1 | Cancer cell line | Male |
| CVCL_C8FL | HAP1 IMPDH2 (-) 2 | Cancer cell line | Male |
| CVCL_F1PU | HyCyte HeLa KO-hIMPDH2 | Cancer cell line | Female |
| CVCL_F1SB | HyCyte NCI-H460 KO-hIMPDH2 | Cancer cell line | Male |
Clinical trials (associated diseases)
371 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT04586348 | PHASE4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | PHASE4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT00142259 | PHASE4 | UNKNOWN | Efficacy and Safety of DBS of the GPi in Patients With Primary Generalized and Segmental Dystonia |
| NCT00950196 | PHASE4 | COMPLETED | Amantadine for Improving Neurologic Symptoms in Ataxia-Telangiectasia |
| NCT00998660 | PHASE4 | COMPLETED | RECHARGE Sub-Study to the Implantable Systems Performance Registry (ISPR) |
| NCT02263417 | PHASE4 | COMPLETED | A Randomized Controlled Trail Comparing Subthalamic and Pallidal Deep Brain Stimulation for Dystonia |
| NCT02559102 | PHASE3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | PHASE3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | PHASE3 | RECRUITING | Reducing Missed Appointments |
| NCT07377032 | PHASE3 | RECRUITING | TAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders |
| NCT00169403 | PHASE3 | UNKNOWN | Pallidal Stimulation in Patients With Idiopathic Generalised Dystonia |
| NCT03232320 | PHASE3 | COMPLETED | Meditoxin® Treatment in Patients With Cervical Dystonia |
| NCT02909959 | PHASE2 | COMPLETED | Sulforaphane for the Treatment of Young Men With Autism Spectrum Disorder |
| NCT06081348 | PHASE2 | RECRUITING | Sertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders |
| NCT06352372 | PHASE2 | COMPLETED | Safety and Efficacy of tPBM for Epileptiform Activity in Autism |
| NCT00001784 | PHASE2 | COMPLETED | Mexiletine for the Treatment of Focal Dystonia |
| NCT00105430 | PHASE2 | COMPLETED | Deep Brain Stimulation for Cervical Dystonia |
| NCT00106782 | PHASE2 | COMPLETED | Transcranial Electrical Polarization to Treat Focal Hand Dystonia |
| NCT00122044 | PHASE2 | COMPLETED | Childhood Hypertonia of Central Origin: A Trial of Anticholinergic Treatment Effects |
| NCT00169338 | PHASE2 | COMPLETED | Pallidal Stimulation in Patients With Post-anoxic and Idiopathic Dystonia |
| NCT00331669 | PHASE2 | UNKNOWN | Efficacy and Safety of Deep Brain Stimulation (DBS) of the Pallidal (GPi) in Patients With Tardive Dystonia |
| NCT02107261 | PHASE2 | COMPLETED | Incobotulinum Toxin A (Xeomin®) As A Treatment For Focal Task-Specific Dystonia Of The Musician’s Hand |
| NCT02470325 | PHASE2 | UNKNOWN | The Effects of Cannabis on Dystonia and Spasticity on Pediatric Patients |
| NCT05027997 | PHASE2 | COMPLETED | Exploratory Study of Dipraglurant (ADX48621) for the Treatment of Patients With Blepharospasm |
| NCT06412653 | PHASE2 | COMPLETED | Prospective Pilot Trial to Address Feasibility and Safety of Oral Zinc in GNAO1 Associated Disorders |
| NCT07304089 | PHASE2 | RECRUITING | A Study to Evaluate the Efficacy, Safety, and Tolerability of VIM0423 in Individuals With Isolated Dystonia |
| NCT00503191 | PHASE1 | COMPLETED | NeuroModulation Technique Treatment of Autism |
| NCT04475848 | PHASE1 | COMPLETED | A Study to Investigate the Safety, Tolerability, Pharmacokinetics, Pharmacodynamics and Food Effect of RO6953958 in Healthy Participants |
| NCT06300398 | PHASE1 | COMPLETED | IAMA-6 Oral Dose Study in Healthy Adults |
| NCT01433757 | PHASE1 | COMPLETED | Ampicillin for DYT-1 Dystonia Motor Symptoms |
| NCT01698450 | PHASE1 | COMPLETED | Magnetic Resonance (MR) Guided Functional Ultrasound-Neurosurgery for Movement Disorders |
| NCT02982304 | PHASE1 | UNKNOWN | Multi-Target Pallidal and Thalamic Deep Brain Stimulation for Hemi-Dystonia |
| NCT06117020 | PHASE1 | COMPLETED | Single and Multiple Ascending Dose Study of MTR-601 in Healthy Individuals |
| NCT06554288 | PHASE1 | RECRUITING | Pharmacogenomic Contributions to Trihexyphenidyl Biotransformation and Response in Children With Dystonic Cerebral Palsy |
| NCT01783041 | PHASE2/PHASE3 | COMPLETED | Effect of Early L-Carnitine Supplementation on Neurodevelopmental Outcomes in Very Preterm Infants |
| NCT05767385 | PHASE2/PHASE3 | RECRUITING | Fetal Cerebrovascular Autoregulation in Congenital Heart Disease and Association With Neonatal Neurobehavior |
| NCT05675098 | EARLY_PHASE1 | NOT_YET_RECRUITING | Central Nervous System Stimulants and Physical Function in Children With Cerebral Palsy |
| NCT00783783 | Not specified | COMPLETED | CYP2D6 Pharmacogenetics in Risperidone-Treated Children |
| NCT01778504 | Not specified | RECRUITING | Studying Childhood-onset Behavioral, Psychiatric, and Developmental Disorders |
| NCT01850784 | Not specified | UNKNOWN | High Energy Formula Feeding in Infants With Congenital Heart Disease |
Related Atlas pages
- Associated diseases: neurodevelopmental disorder
- Targeted by drugs: Mycophenolate Mofetil, Mycophenolic Acid, Ribavirin, Thioguanine
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): dystonic disorder