INHA

gene
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Summary

INHA (inhibin subunit alpha, HGNC:6065) is a protein-coding gene on chromosome 2q35, encoding Inhibin alpha chain (P05111). Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland.

This gene encodes a member of the TGF-beta (transforming growth factor-beta) superfamily of proteins. The encoded preproprotein is proteolytically processed to generate multiple peptide products, including the alpha subunit of the inhibin A and B protein complexes. These complexes negatively regulate follicle stimulating hormone secretion from the pituitary gland. Inhibins have also been implicated in regulating numerous cellular processes including cell proliferation, apoptosis, immune response and hormone secretion. Mutations in this gene may be associated with male infertility and premature ovarian failure in female human patients.

Source: NCBI Gene 3623 — RefSeq curated summary.

At a glance

  • Clinical variants (ClinVar): 60 total
  • Druggable target: yes — 1 molecules with ChEMBL bioactivity
  • MANE Select transcript: NM_002191

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:6065
Approved symbolINHA
Nameinhibin subunit alpha
Location2q35
Locus typegene with protein product
StatusApproved
Ensembl geneENSG00000123999
Ensembl biotypeprotein_coding
OMIM147380
Entrez3623

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 1 protein_coding, 1 protein_coding_CDS_not_defined

ENST00000243786, ENST00000489456

RefSeq mRNA: 1 — MANE Select: NM_002191 NM_002191

CCDS: CCDS2444

Canonical transcript exons

ENST00000243786 — 2 exons

ExonStartEnd
ENSE00000843609219572310219572642
ENSE00000843610219574694219575711

Expression profiles

Bgee: expression breadth ubiquitous, 162 present calls, max score 97.42.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.8256 / max 208.2761, expressed in 156 samples.

FANTOM5 promoters (6 alternative TSS)

Promoter IDTPM avgSamples expressed
255280.344867
255290.160270
255250.143227
255270.128827
255260.037414
2025780.01122

Top tissues by expression

288 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
adrenal tissueUBERON:001830397.42gold quality
right testisUBERON:000453496.72gold quality
left testisUBERON:000453396.66gold quality
right adrenal glandUBERON:000123395.45gold quality
testisUBERON:000047395.22gold quality
left ovaryUBERON:000211994.36gold quality
right adrenal gland cortexUBERON:003582794.16gold quality
left adrenal glandUBERON:000123493.65gold quality
right ovaryUBERON:000211892.78gold quality
left adrenal gland cortexUBERON:003582592.44gold quality
adrenal glandUBERON:000236992.42gold quality
adrenal cortexUBERON:000123591.58gold quality
ovaryUBERON:000099287.90gold quality
primordial germ cell in gonadCL:0000670 ∩ UBERON:000099186.57gold quality
right atrium auricular regionUBERON:000663180.80gold quality
male germ line stem cell (sensu Vertebrata) in testisCL:0000089 ∩ UBERON:000047380.52gold quality
adult organismUBERON:000702379.75gold quality
cardiac atriumUBERON:000208178.51gold quality
placentaUBERON:000198775.96gold quality
nucleus accumbensUBERON:000188275.91gold quality
deciduaUBERON:000245075.84silver quality
body of pancreasUBERON:000115075.63gold quality
right hemisphere of cerebellumUBERON:001489075.50gold quality
cerebellar hemisphereUBERON:000224575.41gold quality
cerebellar cortexUBERON:000212975.20gold quality
right frontal lobeUBERON:000281073.93gold quality
adenohypophysisUBERON:000219673.78gold quality
caudate nucleusUBERON:000187373.08gold quality
putamenUBERON:000187473.01gold quality
pituitary glandUBERON:000000772.68gold quality

Single-cell (SCXA)

Detected in 3 experiment(s), a significant marker in 2.

ExperimentMarker?Max mean expression
E-GEOD-124263yes1564.29
E-GEOD-134144yes628.53
E-ANND-3no0.96

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): CREB1, CTNNB1, DNMT3A, GATA1, GATA4, GATA6, LEF1, NR4A1, NR5A1, NR5A2, SMAD2, SMAD3, TCF7L2, TFAP2A, WT1

miRNA regulators (miRDB)

19 targeting INHA, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-6127100.0066.762188
HSA-MIR-807599.9767.20962
HSA-MIR-6825-5P99.9669.813431
HSA-MIR-477999.8666.501583
HSA-MIR-473999.8465.251832
HSA-MIR-34B-5P99.7867.561175
HSA-MIR-449C-5P99.7867.631168
HSA-MIR-92A-2-5P99.7567.012164
HSA-MIR-4677-5P99.7070.091940
HSA-MIR-2116-5P99.3269.341273
HSA-MIR-465199.0667.572002
HSA-MIR-6749-3P99.0065.731443
HSA-MIR-60898.9367.832013
HSA-MIR-6827-5P98.4664.881256
HSA-MIR-5089-5P98.4566.061388
HSA-MIR-1910-3P98.4467.511695
HSA-MIR-224-5P98.3370.121256
HSA-MIR-6511A-5P98.1367.471770
HSA-MIR-22-5P97.6768.921355

Literature-anchored findings (GeneRIF, showing 40)

  • DNA hypermethylation of the inhibin alpha-subunit gene in prostate carcinoma (PMID:11818495)
  • Patients affected by premature ovarian failure for the missense mutation (769G–>A transition) in the exon 2 of the INHalpha gene. (PMID:12093833)
  • findings suggest that inhibin A is a specific marker of early pregnancy loss before the onset of the clinical symptoms of recurrent miscarriage (PMID:12456605)
  • To determine which cell types in the testes may produce inhibin B, the localization of the two subunits of inhibin B was examined in adult testicular biopsies with normal spermatogenesis, spermatogenic arrest, or Sertoli cell only tubules. (PMID:12493718)
  • Preliminary results show that inhibin A levels are raised in Asian women affected with fetal Down syndrome and sex chromosome abnormality. (PMID:12576745)
  • data suggest that the increased placental expression of inhibin subunit mRNAs is part of the mechanism leading to increased serum activin A and inhibin A levels (PMID:12587530)
  • Results quantify the relative expression of inhibin alpha, inhibin/activin beta(A), beta(B), beta(C), follistatin, activin receptors and beta-glycan genes in placental tissue of term pre-eclamptic patients. (PMID:12651901)
  • results suggest dissociation between major sources of inhibin A and inhibin pro-alpha C in early pregnancy; identified a link between production of pro-alpha C and luteal steroidogenesis and a predominantly feto-placental origin of inhibin A (PMID:12660265)
  • estradiol exerts a greater role over inhibin in FSH-negative feedback regulation during the luteal phase while inhibin A and/or B plays a more critical role as the follicular phase progresses (PMID:12679471)
  • Mast cell-derived activin A may play an important role in airway remodeling in patients with asthma at least in part by mediating the proliferation of airway smooth muscle cells. (PMID:12682233)
  • Proportions of precursor inhibin B and alpha-subunit forms in the circulation are unchanged in men with spermatogenic disorders indicating there is no alteration of the Sertoli cell inhibin secretory pattern. (PMID:12721183)
  • significant correlation between arterial and venous levels of inhibin A, inhibin B and activin A was found in umbilical cord artery and vein; findings suggest the placenta is the main source of inhibin B and the fetus of activin A in the umbilical cord (PMID:12857425)
  • Molecular analysis of the katG codon 315 and the promoter region of the inhA is a good alternative to diagnose isoniazid resistance in South Kore.a (PMID:14596968)
  • role as a marker for pregnancy viability (PMID:14667886)
  • Serum inhibin A may be helpful in predicting the failure of pregnancies. (PMID:14967395)
  • The INHalpha gene is a strong candidate gene for ovarian failure (PMID:15205401)
  • study expands the immunophenotype of granular cell tumor (S100, CD68, protein gene product 9.5, and inhibin-alpha) regardless of location and supports a neural origin (PMID:15214825)
  • no variation between the normal subjects and the premature ovarian failure patients; G769A variation of INHalpha is rare in Korea women with POF. (PMID:15227735)
  • Activin A and inhibin A appear to be viable candidates as laboratory parameters for detection of pregnancy induced hypertension. (PMID:15236099)
  • Women with premature ovarian failure showed low levels of inhibin A (PMID:15374731)
  • review article supports the hypothesis that tumor suppressor activities of the inhibin alpha subunit dominate in non-malignant tissue, but its oncogenic activities emerge during tumorigenesis (PMID:15451570)
  • Expressed in Sertoli cells in oligozoospermia. (PMID:15551748)
  • Ovulatory cycles were characterized by higher FSH and lower inhibin A leveels in hypergonadotropic hypogonadism or premature ovarian failure. (PMID:15562017)
  • Inhibin A expressed in primary clear cell renal cell carcinoma (2/16, 13%) and metastatic clear cell renal cell carcinoma (3/5, 60%). (PMID:15578072)
  • The lower inhibin alpha and betaglycan expression in endometrial adenocarcinoma suggests that the inhibin action may be disrupted. (PMID:15745937)
  • Inhibin A and activin A may be used as markers to predict pregnancies that are likely to miscarry. (PMID:15950648)
  • conclude that obese women present less percentage variation of both inhibin A and B during the menstrual cycle, associated with a low frequency of ovulatory cycles (PMID:16048795)
  • Discordant pattern of inhibin A and inhibin B during the rat estrous cycle is due to independent populations of antral follicles making inhibin B (small antral follicles) or inhibin A (large antral follicles). (PMID:16195413)
  • Inheritance of specific INHA promoter haplotypes predispose to the development of premature ovarian failure. (PMID:16390856)
  • 16C>T and 769G>A variants in INHalpha gene may not be associated to premature ovarian failure disease. (PMID:16396934)
  • A strong colocalisation of inhibin-alpha and -betaA could be demonstrated in malignant endometrial tissue. (PMID:16423381)
  • analysis of inhibin and transforming growth factor beta-binding sites on betaglycan (PMID:16621788)
  • Higher levels of inhibin A and B are associated with oocyte presence but not with fertilization rates. (PMID:16650414)
  • A significant lower expression of the inhibin-alpha subunit in IUGR extravillous trophoblast compared to normal pregnancies was observed. (PMID:16670820)
  • polymorphisms in the INHA gene may have a role in ovarian failure (PMID:16723387)
  • dimeric inhibins do not play a central role in the endocrinological imbalance observed in polycystic ovary syndrome (PMID:16758344)
  • inhibin A may have a role in development of severe preeclampsia (PMID:16778388)
  • The present findings showed that treatment with vaginal estroprogestinic decreases serum inhibin A and inhibin B levels, the follicular diameter. (PMID:16989826)
  • The lower expression of follistatin and beta A subunit in women with recurrent miscarriage may imply an altered activity of activin A at the time of decidualization, which may lead to poor pregnancy outcome in the form of miscarriage. (PMID:17074342)
  • glycosylation of Asn(302) of the alpha-subunit of inhibin A and B results in a decrease in bioactivity, and the effect on inhibin A, at least, is explained by its reduced affinity to betaglycan (PMID:17272393)

Cross-species orthologs

3 orthologs

OrganismSymbolGene ID
danio_rerioinhaENSDARG00000052433
mus_musculusInhaENSMUSG00000032968
rattus_norvegicusInhaENSRNOG00000020097

Paralogs (31): TGFB2 (ENSG00000092969), BMP7 (ENSG00000101144), TGFB1 (ENSG00000105329), BMP5 (ENSG00000112175), BMP8B (ENSG00000116985), TGFB3 (ENSG00000119699), INHBA (ENSG00000122641), BMP4 (ENSG00000125378), BMP2 (ENSG00000125845), GDF5 (ENSG00000125965), GDF1 (ENSG00000130283), BMP15 (ENSG00000130385), GDF15 (ENSG00000130513), GDF11 (ENSG00000135414), MSTN (ENSG00000138379), INHBE (ENSG00000139269), LEFTY2 (ENSG00000143768), GDF7 (ENSG00000143869), BMP3 (ENSG00000152785), BMP6 (ENSG00000153162), GDF6 (ENSG00000156466), NODAL (ENSG00000156574), INHBB (ENSG00000163083), BMP10 (ENSG00000163217), GDF9 (ENSG00000164404), INHBC (ENSG00000175189), BMP8A (ENSG00000183682), GDF3 (ENSG00000184344), LEFTY1 (ENSG00000243709), GDF2 (ENSG00000263761), GDF10 (ENSG00000266524)

Protein

Protein identifiers

Inhibin alpha chainP05111 (reviewed: P05111)

All UniProt accessions (1): P05111

UniProt curated annotations — full annotation on UniProt →

Function. Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition. Inhibins appear to oppose the functions of activins. Inhibin A is a dimer of alpha/INHA and beta-A/INHBA that functions as a feedback regulator in the hypothalamic-pituitary-gonadal (HPG) axis. Inhibits the secretion of FSH from the anterior pituitary gland by acting on pituitary gonadotrope cells. Antagonizes activin A by binding to the proteoglycan, betaglycan, and forming a stable complex with and, thereby, sequestering type II activin receptors while excluding type I receptor. Inhibin B is a dimer of alpha and beta-B that plays a crucial role in the regulation of the reproductive system by inhibiting the secretion of follicle-stimulating hormone (FSH) from the anterior pituitary gland. Thereby, maintains reproductive homeostasis in both males and females. Acts as a more potent suppressor of FSH release than inhibin A. Functions as competitive receptor antagonist binding activin type II receptors with high affinity in the presence of the TGF-beta type III coreceptor/TGFBR3L.

Subunit / interactions. Dimeric, linked by one or more disulfide bonds. Activin B is a dimer of alpha and beta-B. Inhibin A is a dimer of alpha and beta-A. Inhibin B is a dimer of alpha and beta-B. Interacts with TGFBR3L; this interaction regulates female fertility.

Subcellular location. Secreted.

Tissue specificity. Originally found in ovary (granulosa cells) and testis (Sertoli cells), but widely distributed in many tissues including brain and placenta. In adrenal cortex expression is limited to the zona reticularis and the innermost zona fasciculata in the normal gland, extending centripetally into the zona fasciculata in hyperplasia. Also found in adrenocortical tumors. Also expressed in prostate epithelium of benign prostatic hyperplasia, in regions of basal cell hyperplasia and in nonmalignant regions of high grade prostate cancer. Only circulating inhibin B is found in male, whereas circulating inhibins A and B are found in female.

Post-translational modifications. Proteolytic processing yields a number of bioactive forms. The 20/23 kDa forms consist solely of the mature alpha chain, the 26/29 kDa forms consist of the most N-terminal propeptide linked through a disulfide bond to the mature alpha chain, the 50/53 kDa forms encompass the entire proprotein. Each type can be furthermore either mono- or diglycosylated, causing the mass difference.

Similarity. Belongs to the TGF-beta family.

RefSeq proteins (1): NP_002182* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR001839TGF-b_CDomain
IPR015615TGF-beta-likeFamily
IPR017175Inhibin_asuFamily
IPR017948TGFb_CSConserved_site
IPR029034Cystine-knot_cytokineHomologous_superfamily

Pfam: PF00019

UniProt features (23 total): mutagenesis site 5, disulfide bond 4, sequence variant 3, glycosylation site 3, propeptide 2, sequence conflict 2, site 2, signal peptide 1, chain 1

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P05111-F170.800.26

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (2): 61–62 (cleavage); 232–233 (cleavage)

Disulfide bonds (4): 291–363, 295–365, 327, 262–328

Glycosylation sites (3): 146, 268, 302

Mutagenesis-validated functional residues (5):

PositionPhenotype
56–57loss of cleavage; when associated with 60-aa-61.
60–61loss of cleavage; when associated with 55-aa-56.
231–232loss of cleavage.
268loss of glycosylation.
302loss of glycosylation.

Function

Pathways and Gene Ontology

Reactome pathways

10 pathways

IDPathway
R-HSA-1502540Signaling by Activin
R-HSA-201451Signaling by BMP
R-HSA-209822Glycoprotein hormones
R-HSA-9839406TGFBR3 regulates activin signaling
R-HSA-162582Signal Transduction
R-HSA-209952Peptide hormone biosynthesis
R-HSA-2980736Peptide hormone metabolism
R-HSA-392499Metabolism of proteins
R-HSA-9006936Signaling by TGFB family members
R-HSA-9839373Signaling by TGFBR3

MSigDB gene sets: 249 (showing top): GOBP_MYELOID_CELL_DIFFERENTIATION, GSE45365_CTRL_VS_MCMV_INFECTION_NK_CELL_UP, GOBP_REGULATION_OF_CELL_ACTIVATION, GOBP_HEMOGLOBIN_METABOLIC_PROCESS, GOBP_NEGATIVE_REGULATION_OF_CELL_DEVELOPMENT, MYOGENIN_Q6, GOBP_MYELOID_CELL_HOMEOSTASIS, GOBP_REGULATION_OF_PHOSPHORYLATION, GOBP_SKELETAL_SYSTEM_DEVELOPMENT, GOBP_B_CELL_ACTIVATION, GCANCTGNY_MYOD_Q6, GOBP_ERYTHROCYTE_HOMEOSTASIS, GOBP_NEGATIVE_REGULATION_OF_B_CELL_ACTIVATION, GOBP_REGULATION_OF_HORMONE_LEVELS, GOBP_HORMONE_TRANSPORT

GO Biological Process (22): skeletal system development (GO:0001501), ovarian follicle development (GO:0001541), signal transduction (GO:0007165), cell surface receptor signaling pathway (GO:0007166), cell surface receptor protein serine/threonine kinase signaling pathway (GO:0007178), cell-cell signaling (GO:0007267), male gonad development (GO:0008584), cell differentiation (GO:0030154), erythrocyte differentiation (GO:0030218), negative regulation of type II interferon production (GO:0032689), regulation of cell population proliferation (GO:0042127), negative regulation of phosphorylation (GO:0042326), hemoglobin biosynthetic process (GO:0042541), negative regulation of B cell differentiation (GO:0045578), negative regulation of macrophage differentiation (GO:0045650), negative regulation of cell cycle (GO:0045786), positive regulation of follicle-stimulating hormone secretion (GO:0046881), negative regulation of follicle-stimulating hormone secretion (GO:0046882), regulation of cell cycle (GO:0051726), regulation of follicle-stimulating hormone secretion (GO:0046880), system development (GO:0048731), negative regulation of multicellular organismal process (GO:0051241)

GO Molecular Function (7): signaling receptor binding (GO:0005102), cytokine activity (GO:0005125), hormone activity (GO:0005179), growth factor activity (GO:0008083), inhibin binding (GO:0034711), protein-containing complex binding (GO:0044877), protein binding (GO:0005515)

GO Cellular Component (8): photoreceptor outer segment (GO:0001750), photoreceptor inner segment (GO:0001917), extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), inhibin-betaglycan-ActRII complex (GO:0034673), neuronal cell body (GO:0043025), inhibin A complex (GO:0043512), inhibin B complex (GO:0043513)

Reactome top-level categories

Rollup of top-6 pathways:

CategoryPathways
Signaling by TGFB family members3
Peptide hormone biosynthesis1
Signaling by TGFBR31
Peptide hormone metabolism1
Metabolism of proteins1
Signal Transduction1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
regulation of cellular process3
follicle-stimulating hormone secretion3
receptor ligand activity3
cellular anatomical structure3
cell communication2
signaling2
cell cycle2
regulation of follicle-stimulating hormone secretion2
protein binding2
binding2
inhibin complex2
system development1
female gonad development1
anatomical structure development1
cellular process1
cellular response to stimulus1
signal transduction1
enzyme-linked receptor protein signaling pathway1
gonad development1
development of primary male sexual characteristics1
cellular developmental process1
myeloid cell differentiation1
erythrocyte homeostasis1
negative regulation of cytokine production1
type II interferon production1
regulation of type II interferon production1
cell population proliferation1
phosphorylation1
regulation of phosphorylation1
negative regulation of phosphate metabolic process1
macromolecule biosynthetic process1
hemoglobin metabolic process1
B cell differentiation1
regulation of B cell differentiation1
negative regulation of lymphocyte differentiation1
negative regulation of B cell activation1
negative regulation of myeloid leukocyte differentiation1
macrophage differentiation1
regulation of macrophage differentiation1
negative regulation of cellular process1

Protein interactions and networks

STRING

1030 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
INHAINHBAP08476863
INHAALPIP09923778
INHAGLIS3Q8NEA6746
INHAINHBBP09529736
INHABMP15O95972719
INHAALPPP05187688
INHATGFBR3Q03167673
INHASIX5Q8N196654
INHAACVR1Q04771610
INHAGDF9O60383606
INHAFSHRP23945605
INHAACVR2BQ13705602
INHAACVR1BP36896593
INHAHSD3B1P14060564
INHAAMHP03971559

IntAct

14 interactions, top by confidence:

ABTypeScore
SIAH1INHApsi-mi:“MI:0915”(physical association)0.560
INHASIAH1psi-mi:“MI:0915”(physical association)0.560
INHAHSPA5psi-mi:“MI:0914”(association)0.530
FAHD1CLUHpsi-mi:“MI:0914”(association)0.530
PPP2R3BINHApsi-mi:“MI:0915”(physical association)0.400
INHAMOCS3psi-mi:“MI:0914”(association)0.350
TCF4INHApsi-mi:“MI:0914”(association)0.350
TMEM129INHApsi-mi:“MI:0914”(association)0.350

BioGRID (18): SIAH1 (Two-hybrid), HSPA5 (Affinity Capture-MS), PDIA3 (Affinity Capture-MS), CALR (Affinity Capture-MS), IKBKG (Affinity Capture-MS), SIAH1 (Two-hybrid), PDIA3 (Affinity Capture-MS), CALR (Affinity Capture-MS), HSPA5 (Affinity Capture-MS), IKBKG (Affinity Capture-MS), INHA (Affinity Capture-Western), HSPA5 (Affinity Capture-MS), IKBKG (Affinity Capture-MS), PDIA3 (Affinity Capture-MS), CALR (Affinity Capture-MS)

ESM2 similar proteins: A0A140LHF2, A0EQL2, D3YZF7, D7PDD4, O15533, O55237, O70394, O70540, O95866, P04278, P05111, P07994, P08689, P0C6B3, P0DP72, P15196, P17490, P18627, P40238, P55101, P60882, P97497, Q00657, Q08351, Q14393, Q14773, Q16671, Q3SWY4, Q5BK54, Q5NKT8, Q5TJE4, Q61790, Q61826, Q62588, Q6PZD2, Q6UVK1, Q6UWB1, Q7Z7M0, Q7Z7M1, Q86VR7

Diamond homologs: F1QWZ4, O08717, O13048, O19006, O46564, O46576, O77755, O88959, O95393, O95972, P04087, P05111, P07713, P07994, P12643, P12644, P12645, P17490, P20722, P21274, P21275, P22004, P22444, P25703, P30884, P30885, P34820, P34822, P38440, P43031, P49001, P49002, P55101, P55107, P55108, P58166, P91699, P91706, P97737, Q04906

SIGNOR signaling

1 interactions.

AEffectBMechanism
INHAdown-regulatesTGFBR3binding

Disease & clinical

Clinical variants and AI predictions

ClinVar

60 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance45
Likely benign9
Benign3

Top pathogenic / likely-pathogenic (0)

SpliceAI

280 predictions. Top by Δscore:

VariantEffectΔscore
2:219574692:A:AGacceptor_gain1.0000
2:219574693:G:GGacceptor_gain1.0000
2:219570215:CCGTA:Cdonor_loss0.9900
2:219570216:CGTA:Cdonor_loss0.9900
2:219570217:GTA:Gdonor_loss0.9900
2:219570218:TA:Tdonor_loss0.9900
2:219570219:ACC:Adonor_loss0.9900
2:219570220:CCTT:Cdonor_gain0.9900
2:219574690:GCAG:Gacceptor_loss0.9900
2:219574691:CAG:Cacceptor_loss0.9900
2:219574692:AG:Aacceptor_loss0.9900
2:219574693:GA:Gacceptor_gain0.9900
2:219574693:GAT:Gacceptor_gain0.9900
2:219574692:AGAT:Aacceptor_gain0.9800
2:219574693:GATG:Gacceptor_gain0.9800
2:219574682:T:TAacceptor_gain0.9700
2:219574689:T:Aacceptor_gain0.9700
2:219572242:G:GTdonor_gain0.9600
2:219572242:G:Tdonor_gain0.9600
2:219570219:A:ACdonor_gain0.9500
2:219570220:C:CCdonor_gain0.9500
2:219572638:CACAG:Cdonor_loss0.9500
2:219572639:ACAGG:Adonor_loss0.9500
2:219572640:CAG:Cdonor_loss0.9500
2:219572641:AG:Adonor_loss0.9500
2:219572642:GG:Gdonor_loss0.9500
2:219572643:G:Cdonor_loss0.9500
2:219572644:T:Gdonor_loss0.9500
2:219574693:GATGC:Gacceptor_gain0.9500
2:219572260:G:Tdonor_gain0.9400

AlphaMissense

2301 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
2:219575253:G:CW276C0.997
2:219575253:G:TW276C0.997
2:219575237:T:GF271C0.995
2:219575236:T:CF271L0.994
2:219575238:C:AF271L0.994
2:219575238:C:GF271L0.994
2:219575262:G:CW279C0.994
2:219575262:G:TW279C0.994
2:219575296:T:AC291S0.991
2:219575297:G:AC291Y0.991
2:219575297:G:CC291S0.991
2:219575298:T:GC291W0.990
2:219575209:T:AC262S0.989
2:219575210:G:CC262S0.989
2:219575444:T:AV340D0.989
2:219574953:G:CW176C0.987
2:219574953:G:TW176C0.987
2:219575065:T:CF214L0.987
2:219575067:C:AF214L0.987
2:219575067:C:GF214L0.987
2:219575251:T:AW276R0.987
2:219575251:T:CW276R0.987
2:219574769:T:GF115C0.985
2:219575297:G:TC291F0.985
2:219575407:T:AC328S0.984
2:219575408:G:CC328S0.984
2:219575237:T:CF271S0.982
2:219575287:T:CF288L0.982
2:219575288:T:GF288C0.982
2:219575289:C:AF288L0.982

dbSNP variants (sampled 300 via entrez): RS1000907726 (2:219571804 C>T), RS1001360087 (2:219571586 C>A,G,T), RS1004353002 (2:219572336 G>A,T), RS1004751360 (2:219571463 G>C), RS1005228764 (2:219571305 G>A,C,T), RS1005355260 (2:219573617 C>A,G,T), RS1005411760 (2:219574532 T>C), RS1006280232 (2:219574643 C>T), RS1007512209 (2:219570696 G>A), RS1007826409 (2:219575424 G>T), RS1008166879 (2:219575782 C>T), RS1008267340 (2:219572115 C>A,G), RS1008508130 (2:219571606 G>A,C,T), RS1008620099 (2:219571110 A>G,T), RS1009287576 (2:219573251 G>A)

Disease associations

OMIM: gene MIM:147380 | disease phenotypes:

GenCC curated gene-disease

Mondo (1): primary ovarian failure (MONDO:0005387)

Orphanet (1): NON RARE IN EUROPE: Primary ovarian failure (Orphanet:619)

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

MeSH disease descriptors (1)

DescriptorNameTree numbers
D016649Primary Ovarian InsufficiencyC12.050.351.500.056.630.750; C12.100.250.056.630.750; C19.391.630.750

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL5169109 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 11,097 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL497318CANNABIGEROL211,097

PharmGKB: 1 entry (VIP=true, CPIC=false)

ChEMBL bioactivities

1 potent at pChembl≥5 of 1 total, top 1 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
5.28IC505200nMCANNABIGEROL

PubChem BioAssay actives

1 with measured affinity, of 1 total; 1 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
2-[(2E)-3,7-dimethylocta-2,6-dienyl]-5-pentylbenzene-1,3-diol1845667: Inhibition of Inh (unknown origin)ic505.2000uM

CTD chemical–gene interactions

41 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
bisphenol Aaffects expression, increases methylation2
sodium arsenitedecreases expression2
Benzo(a)pyrenedecreases methylation, increases mutagenesis2
OTX015decreases expression1
mivebresibdecreases expression1
glycidyl methacrylatedecreases expression1
testosterone undecanoateaffects cotreatment, decreases expression1
terbufosincreases methylation1
sulforaphanedecreases expression1
tris(1,3-dichloro-2-propyl)phosphatedecreases expression1
CGP 52608affects binding, increases reaction1
bisphenol Sdecreases expression1
(+)-JQ1 compounddecreases expression1
Resveratrolaffects cotreatment, decreases expression1
Sunitinibdecreases expression1
Troglitazonedecreases expression1
Acetaminophendecreases expression1
Air Pollutantsdecreases expression, increases abundance1
Atrazineincreases expression, increases reaction1
Cocainedecreases expression1
Dichlorodiphenyl Dichloroethylenedecreases expression1
Dibutyl Phthalateincreases expression1
Diethylhexyl Phthalateincreases expression1
Doxorubicinaffects expression1
Fonofosincreases methylation1
Endosulfanincreases expression1
Estradioldecreases expression1
Flame Retardantsdecreases expression1
Leadaffects expression1
Parathionincreases methylation1

ChEMBL screening assays

1 unique, capped per target: 1 binding

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL5096678BindingInhibition of Inh (unknown origin)Phytocannabinoid Pharmacology: Medicinal Properties of Cannabis sativa Constituents Aside from the “Big Two”. — J Nat Prod

Clinical trials (associated diseases)

75 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT00417066PHASE4COMPLETEDFlexible GnRH Antagonist vs Flare up GnRH Agonist Protocol in Poor Responders
NCT00732693PHASE4COMPLETEDEvaluation of Physiologic and Standard Sex Steroid Replacement Regimens in Women With Premature Ovarian Failure
NCT00837616PHASE4COMPLETEDEstrogen Dosing in Turner Syndrome: Pharmacology and Metabolism
NCT01853501PHASE4UNKNOWNEffects of ADSC Therapy in Women With POF
NCT02783937PHASE4COMPLETEDFilgrastim for Premature Ovarian Insufficiency
NCT03535480PHASE4UNKNOWNAutologous Bone Marrow Stem Cell Ovarian Transplantation to Restore Ovarian Function in Premature Ovarian Failure
NCT00140998PHASE3COMPLETEDEstrogen Treatment (Oral vs. Patches) in Turner Syndrome
NCT00001951PHASE2COMPLETEDHormone Replacement in Young Women With Premature Ovarian Failure
NCT00370019PHASE2WITHDRAWNEffects of an Estrogen Replacement Therapy Skin Patch on Ovulation in Women With Premature Ovarian Failure
NCT00429494PHASE2COMPLETEDGnRH Analogue for Ovarian Function Preservation in Hematopoietic Stem Cell Transplantation Patients
NCT03816852PHASE2SUSPENDEDThe Safety and Efficiency Study of Mesenchymal Stem Cell (19#iSCLife®-POI) in Premature Ovarian Insufficiency
NCT04536467PHASE2UNKNOWNPrevention of Chemotherapy-Induced Ovarian Failure With Goserelin in Premenopausal Lymphoma Patients
NCT06117982PHASE2COMPLETEDThe Impact of Granulocyte Colony Stimulating Factor on Premature Ovarian Insufficiency
NCT02912104PHASE1COMPLETEDA Therapeutic Trial of Human Amniotic Epithelial Cells Transplantation for Primary Ovarian Failure
NCT03178695PHASE1COMPLETEDInovium Ovarian Rejuvenation Trials
NCT04815213PHASE1ACTIVE_NOT_RECRUITINGThe Use of Expandeded Mesenchymal Stromal Cells (MSC) in Premature Ovarian Failure (POF) in Adult Humans
NCT05138367PHASE1COMPLETEDEffects of UCA-PSCs in Women With POF
NCT06132542PHASE1UNKNOWNAutologous ADMSC Transplantation in Patients With POI
NCT00948857PHASE2/PHASE3TERMINATEDDehydroepiandrosterone (DHEA) Treatment and Premature Ovarian Failure (POF)
NCT04031456PHASE2/PHASE3RECRUITINGAutologous PRP Infusion May Restore Ovarian Function and May Promote Folliculogenesis in POI Patients
NCT02043743PHASE1/PHASE2UNKNOWNAutologous Stem Cells Transplantation in Patients With Idiopathic and Drug Induced Premature Ovarian Failure
NCT02062931PHASE1/PHASE2UNKNOWNAutologous Mesenchymal Stem Cells Transplantation In Women With Premature Ovarian Failure
NCT02151890PHASE1/PHASE2COMPLETEDPregnancy After Stem Cell Transplantation in Premature Ovarian Failure
NCT02372474PHASE1/PHASE2COMPLETEDIt is a Real The First Baby Of Autologous Stem Cell Therapy in Premature Ovarian Failure
NCT02603744PHASE1/PHASE2UNKNOWNAutologous Adipose Derived Mesenchymal Stromal Cells Transplantation in Women With Premature Ovarian Failure (POF)
NCT02644447PHASE1/PHASE2COMPLETEDTransplantation of HUC-MSCs With Injectable Collagen Scaffold for POF
NCT03069209PHASE1/PHASE2UNKNOWNAutologous Bone Marrow-Derived Stem Cell Transplantation in Patients With Premature Ovarian Failure (POF)
NCT03985462PHASE1/PHASE2WITHDRAWNVery Small Embryonic-like Stem Cells for Ovary
NCT04009473PHASE1/PHASE2UNKNOWNStem Cell Therapy and Growth Factor Ovarian in Vitro Activation
NCT04071574PHASE1/PHASE2COMPLETEDComparative Study on the Efficacy of Ovarian Stimulation Protocols on the Success Rate of ICSI in Female Infertility
NCT04922398PHASE1/PHASE2UNKNOWNOvarian Injection of PRP (Platelet -Rich Plasma) Vs Normal Saline in Premature Ovarian Insufficiency
NCT05462379PHASE1/PHASE2ACTIVE_NOT_RECRUITINGAutologous Heterotopic Fresh Ovarian Graft in Woman With LACC Eligible for Pelvic Radiotherapy Treatment.
NCT06202547PHASE1/PHASE2UNKNOWNIntra-ovarian Injection of MSC-EVs in Idiopathic Premature Ovarian Failure
NCT01129947EARLY_PHASE1WITHDRAWNThe Use of DHEA in Women With Premature Ovarian Failure
NCT05522634EARLY_PHASE1UNKNOWNA Clinical Study of Chinese Herbal Compound TJAOA101 in the Treatment of Premature Ovarian Insufficiency
NCT07308327EARLY_PHASE1ACTIVE_NOT_RECRUITINGThe Influence of Gut Microbiota on Ovarian Function: A Single-center, Randomized,Double Blind, Parallel-controlled, Exploratory Clinical Trial
NCT00001275Not specifiedCOMPLETEDOvarian Follicle Function in Patients With Primary Ovarian Failure
NCT00001306Not specifiedCOMPLETEDSteroid Therapy in Autoimmune Premature Ovarian Failure
NCT00006156Not specifiedCOMPLETEDFeasibility Study for Development of an Early Test for Ovarian Failure
NCT00119925Not specifiedUNKNOWN‘SPRING’-Study: Subfertility Guidelines: Patient Related Implementation in the Netherlands Among Gynaecologists

No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.