INHBA

gene
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Summary

INHBA (inhibin subunit beta A, HGNC:6066) is a protein-coding gene on chromosome 7p14.1, encoding Inhibin beta A chain (P08476). Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial de….

This gene encodes a member of the TGF-beta (transforming growth factor-beta) superfamily of proteins. The encoded preproprotein is proteolytically processed to generate a subunit of the dimeric activin and inhibin protein complexes. These complexes activate and inhibit, respectively, follicle stimulating hormone secretion from the pituitary gland. The encoded protein also plays a role in eye, tooth and testis development. Elevated expression of this gene may be associated with cancer cachexia in human patients.

Source: NCBI Gene 3624 — RefSeq curated summary.

At a glance

  • GWAS associations: 7
  • Clinical variants (ClinVar): 41 total
  • Druggable target: yes
  • MANE Select transcript: NM_002192

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:6066
Approved symbolINHBA
Nameinhibin subunit beta A
Location7p14.1
Locus typegene with protein product
StatusApproved
Ensembl geneENSG00000122641
Ensembl biotypeprotein_coding
OMIM147290
Entrez3624

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 8 protein_coding, 2 protein_coding_CDS_not_defined

ENST00000242208, ENST00000416150, ENST00000442711, ENST00000464515, ENST00000638023, ENST00000867823, ENST00000916727, ENST00000947876, ENST00000947878, ENST00000947879

RefSeq mRNA: 1 — MANE Select: NM_002192 NM_002192

CCDS: CCDS5464

Canonical transcript exons

ENST00000242208 — 3 exons

ExonStartEnd
ENSE000014103364169998741700517
ENSE000014109764170300541703090
ENSE000018874224168511441690542

Expression profiles

Bgee: expression breadth ubiquitous, 235 present calls, max score 99.40.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 56.8551 / max 19154.2608, expressed in 1306 samples.

FANTOM5 promoters (6 alternative TSS)

Promoter IDTPM avgSamples expressed
8375451.23761172
837513.5739895
837531.4648605
837560.223447
837500.214796
837520.140647

Top tissues by expression

280 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
cartilage tissueUBERON:000241899.40gold quality
saphenous veinUBERON:000731898.20gold quality
vena cavaUBERON:000408797.92gold quality
visceral pleuraUBERON:000240197.67gold quality
stromal cell of endometriumCL:000225595.13gold quality
buccal mucosa cellCL:000233694.41gold quality
type B pancreatic cellCL:000016993.98gold quality
islet of LangerhansUBERON:000000692.56gold quality
placentaUBERON:000198792.16gold quality
caput epididymisUBERON:000435890.50gold quality
blood vessel layerUBERON:000479789.99gold quality
lower lobe of lungUBERON:000894989.35gold quality
parotid glandUBERON:000183189.20gold quality
right coronary arteryUBERON:000162588.56gold quality
tendon of biceps brachiiUBERON:000818886.78gold quality
calcaneal tendonUBERON:000370185.46gold quality
popliteal arteryUBERON:000225085.09gold quality
tibial arteryUBERON:000761085.07gold quality
tendonUBERON:000004384.70gold quality
gall bladderUBERON:000211084.66gold quality
aortaUBERON:000094784.47gold quality
coronary arteryUBERON:000162183.86gold quality
thoracic aortaUBERON:000151583.61gold quality
ascending aortaUBERON:000149683.52gold quality
left coronary arteryUBERON:000162683.32gold quality
trabecular bone tissueUBERON:000248383.17gold quality
deciduaUBERON:000245082.94gold quality
cardiac muscle of right atriumUBERON:000337982.75gold quality
periodontal ligamentUBERON:000826682.46gold quality
corpus epididymisUBERON:000435981.97gold quality

Single-cell (SCXA)

Detected in 7 experiment(s), a significant marker in 6.

ExperimentMarker?Max mean expression
E-CURD-53yes3776.10
E-HCAD-15yes592.83
E-MTAB-8142yes77.93
E-MTAB-8410yes43.76
E-ENAD-27yes6.29
E-MTAB-6386no9.27
E-ANND-3no0.00

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): AR, EGR1, EOMES, ESR1, ESR2, EVX1, FLCN, FOXH1, FOXL2, GSC, HNF4A, ID1, ID2, ID3, IRX1, LHX3, MITF, MYCN, PITX2, SNAI1, TP53

miRNA regulators (miRDB)

71 targeting INHBA, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-6867-5P100.0082.213464
HSA-MIR-511-3P99.9968.851467
HSA-MIR-548AW99.9972.573559
HSA-MIR-4789-5P99.9870.762721
HSA-MIR-4482-3P99.9872.503147
HSA-MIR-311999.9271.342390
HSA-MIR-6768-5P99.9267.361942
HSA-MIR-106A-5P99.9073.942683
HSA-MIR-430299.8967.941187
HSA-MIR-380-3P99.8970.181978
HSA-MIR-17-5P99.8973.832665
HSA-MIR-106B-5P99.8874.722795
HSA-MIR-20A-5P99.8874.762769
HSA-MIR-20B-5P99.8874.012621
HSA-MIR-519D-3P99.8873.972607
HSA-MIR-93-5P99.8873.982606
HSA-MIR-526B-3P99.8874.062587
HSA-MIR-6875-3P99.8270.262983
HSA-MIR-205-5P99.8170.051557
HSA-MIR-4659A-3P99.8072.624248
HSA-MIR-4659B-3P99.8072.624248
HSA-MIR-548AJ-5P99.7871.123085
HSA-MIR-548F-5P99.7871.023093
HSA-MIR-548G-5P99.7871.123085
HSA-MIR-548X-5P99.7871.123085
HSA-MIR-1213099.7565.47452
HSA-MIR-4677-5P99.7070.091940
HSA-MIR-509399.6769.262291
HSA-MIR-4756-3P99.6266.301319
HSA-MIR-467299.5071.582893

Literature-anchored findings (GeneRIF, showing 40)

  • distribution in gestational tissues across human pregnancy and during labour (PMID:11969340)
  • Activin was secreted by both endometrial adenocarcinoma cell lines. Activin showed a weak, but significant, mitogenic effect on HEC-50 cells without modifications in Bax and Bcl-2. Activin is a regulator of endometrial cancer cell growth. (PMID:12088879)
  • Activin A is potently induced in the bone marrow and may play a role in the suppression of inflammatory or immune processes. (PMID:12149426)
  • Activin A promotes human endometrial stromal cell decidualization in vitro. (PMID:12161551)
  • Seminal inhibin B levels were higher in normal men than in men after vasectomy and in men with azoospermia. (PMID:12399529)
  • synthesis by the endosalpinx (PMID:12414903)
  • Activin A induces cardiac ankyrin repeat protein (CARP) in cultured intimal smooth muscle cells in a dose-dependent way. (PMID:12524226)
  • data suggest that the increased placental expression of inhibin subunit mRNAs is part of the mechanism leading to increased serum activin A and inhibin A levels (PMID:12587530)
  • Results quantify the relative expression of inhibin alpha, inhibin/activin beta(A), beta(B), beta(C), follistatin, activin receptors and beta-glycan genes in placental tissue of term pre-eclamptic patients. (PMID:12651901)
  • Activin A promotes Smad2 phosphorylation and its nuclear translocation. As an immediate response to activin A, Smad2 was modified by phosphorylation within 2 hours. (PMID:12665510)
  • Activin-A modulates ActRI mRNA levels in human trophoblast cells. (PMID:12702211)
  • Proportions of precursor inhibin B and alpha-subunit forms in the circulation are unchanged in men with spermatogenic disorders indicating there is no alteration of the Sertoli cell inhibin secretory pattern. (PMID:12721183)
  • Serum inhibin B is an effective marker of follicular development in infertile women undergoing induction of superovulation, and may represent a further marker for ovarian follicular capacity. (PMID:12877256)
  • activin promoted ovine preantral follicle & oocyte growth in vitro, but did not accelerate follicle differentiation; these results support a paracrine role for activin A during early oocyte & follicular development (PMID:14613548)
  • Peripheral blood monoCYTES and endothelium, activated by TNFalpha, could be extraplacental sources of activin A in preeclampsia. May have role in mechanisms underlying endothelium dysfunction. (PMID:14671202)
  • DLX1 blocks multiple signals from TGF-beta superfamily cytokines such as activin A, TGF-beta1, and BMP-4, including differentiation of a hematopoietic cell line by activin A (PMID:14671321)
  • Data indicate that activin A and activin receptors IIA and IIB may be involved in the regulation of germ cell proliferation in the human ovary during the period leading up to primordial follicle formation. (PMID:14738881)
  • Activin A markedly increased gene expression of mediators involved in infarction healing and myocardial remodeling in neonatal rat cardiomyocytes. (PMID:14993131)
  • the smad pathway and the tumor suppressor menin are key regulators of activin effects on PRL and Pit-1 expression, as well as on cell growth inhibition (PMID:15031321)
  • Testosterone secretion is impaired in infants with Klinefelter syndrome. (PMID:15070957)
  • Activin A increased the expression of VEGF receptors in cultured sinusoidal endothelial cells. (PMID:15123352)
  • activin signaling via type II receptors requires a specific sequence for ALK4 binding (PMID:15123686)
  • activin A is a novel stimulus of vascular endothelial growth factor gene expression in hepatocellular carcinoma (PMID:15188178)
  • Mutations in INHbetaB and INHbetaA genes are not associated with ovarian failure. (PMID:15205401)
  • may be an anabolic factor in cartilage (PMID:15292256)
  • Women with POF showed low levels of inhibin A and inhibin B, but not of activin A, whereas the levels of pro-alphaC were significantly higher than in postmenopausal women (PMID:15374731)
  • review article of gene expression of inhibin beta A in normal breast carcinoma, fibroadenoma, and normal mammary tissue (PMID:15451571)
  • enhanced activin A expression suppresses proliferation and colony formation of human neuroblastoma cell (PMID:15580313)
  • activin A inhibits adipogenesis via affecting the transcriptional factor cascade upstream of PPARgamma expression (PMID:15737465)
  • Activin A and inhibin A may be used as markers to predict pregnancies that are likely to miscarry. (PMID:15950648)
  • Activation of TAK1 (and probably p38-MAPK), but not Smad3, is necessary for triggering induction of oFSHbeta by activin. (PMID:16081641)
  • Hyperplastic tissue labelled more intensely than endometrium for the presence of INH-betaA and -betaB. (PMID:16423381)
  • When cultured with the mesonephros, Wolffian ducts formed ectopic buds in response to GDNF; inhibition of GDNF-induced budding by activin A led to inhibition of cell proliferation, & decrease of both Pax2 expression and PI3- & MAP kinase phosphorylation (PMID:16643884)
  • Activin has autocrine roles in tumor growth of ovarian clear cell adenocarcinoma cells. (PMID:16820918)
  • Activin A has opposite effects on glucagon and arx gene expression in alpha-cells compared with beta-cells, a finding that may have relevance during pancreatic endocrine lineage specification and physiological function of the adult islets (PMID:16988001)
  • Phosphatidylinositol 3-kinase antagonizes the ability of human embryonic stem cells to differentiate in response to transforming growth factor beta family members such as Activin A (PMID:17204604)
  • FGF-2 and activin A enhance their signals each other in bovine aortic endothelial cells, and endogenous activin A is critical for FGF-2-induced capillary formation. (PMID:17384470)
  • Activin A suppresses interleukin-1-induced matrix metalloproteinase 3 secretion in human chondrosarcoma cells (PMID:17436000)
  • Serum AMH and inhibin B are significantly lower in the men with nonobstructive azoospermia compared to the controls. (PMID:17462637)
  • Activin-A is an excellent candidate for an effector molecule in human luteolysis whose paracrine action is inhibited during maternal recognition of pregnancy (PMID:17478557)

Cross-species orthologs

4 orthologs

OrganismSymbolGene ID
danio_rerioinhbaaENSDARG00000012671
danio_rerioinhbabENSDARG00000024759
mus_musculusInhbaENSMUSG00000041324
rattus_norvegicusInhbaENSRNOG00000014320

Paralogs (31): TGFB2 (ENSG00000092969), BMP7 (ENSG00000101144), TGFB1 (ENSG00000105329), BMP5 (ENSG00000112175), BMP8B (ENSG00000116985), TGFB3 (ENSG00000119699), INHA (ENSG00000123999), BMP4 (ENSG00000125378), BMP2 (ENSG00000125845), GDF5 (ENSG00000125965), GDF1 (ENSG00000130283), BMP15 (ENSG00000130385), GDF15 (ENSG00000130513), GDF11 (ENSG00000135414), MSTN (ENSG00000138379), INHBE (ENSG00000139269), LEFTY2 (ENSG00000143768), GDF7 (ENSG00000143869), BMP3 (ENSG00000152785), BMP6 (ENSG00000153162), GDF6 (ENSG00000156466), NODAL (ENSG00000156574), INHBB (ENSG00000163083), BMP10 (ENSG00000163217), GDF9 (ENSG00000164404), INHBC (ENSG00000175189), BMP8A (ENSG00000183682), GDF3 (ENSG00000184344), LEFTY1 (ENSG00000243709), GDF2 (ENSG00000263761), GDF10 (ENSG00000266524)

Protein

Protein identifiers

Inhibin beta A chainP08476 (reviewed: P08476)

Alternative names: Activin beta-A chain, Erythroid differentiation protein

All UniProt accessions (2): A4D1W7, P08476

UniProt curated annotations — full annotation on UniProt →

Function. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition. Activin A is a homodimer of INHBA that plays a role in several essential biological processes including embryonic development, stem cell maintenance and differentiation, haematopoiesis, cell proliferation and tissue fibrosis. Signals through type I (such as ACVR1B or ACVR1C) and type II receptors (such as ACVR2A, ACVR2B or BMPR2) which, upon ligand binding, phosphorylate SMAD2 and SMAD3 intracellular signaling mediators that form a complex with SMAD4, translocate to the nucleus and modulate gene expression. Can also activate alternative non-canonical intracellular signaling pathways including the p38 MAPK, extracellular signal-regulated kinases 1/2 (ERK1/2) and c-Jun N-terminal kinases (JNKs) to modulate cell migration and differentiation. Alternatively, promotes osteoblastic differentiation via ACVRL1-SMAD1/5/9 pathway. In addition, can engage the type I receptor ACVR1 to form an ACVR1-activin A-type II receptor non-signaling complex (NSC) that renders receptors unavailable for engagement with BMPs, hence resulting in an apparent inhibition of ACVR1-mediated BMP signaling. Inhibin A is a dimer of alpha/INHA and beta-A/INHBA that functions as a feedback regulator in the hypothalamic-pituitary-gonadal (HPG) axis. Inhibits the secretion of FSH from the anterior pituitary gland by acting on pituitary gonadotrope cells. Antagonizes activin A by binding to the proteoglycan, betaglycan, and forming a stable complex with and, thereby, sequestering type II activin receptors while excluding type I receptor.

Subunit / interactions. Dimeric, linked by one or more disulfide bonds. Inhibin A is a dimer of alpha/INHA and beta-A/INHBA. Activin A is a homodimer of beta-A/INHBA. Activin AB is a dimer of beta-A/INHBA and beta-B/INHBB. Interacts with FST and FSTL3; these interactions prevent activin A interaction to its type II receptor. Activin A interacts with ACVR2A. Activin A interacts with BMPR2. Inhibin A interacts with ACVR1; this interaction creates a non-signaling complex (NSC) that inhibits ACVR1-mediated BMP signaling. Inhibin A interacts with ACVR2A.

Subcellular location. Secreted.

Similarity. Belongs to the TGF-beta family.

RefSeq proteins (1): NP_002183* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000491Inhibin_betaAFamily
IPR001111TGF-b_propeptideDomain
IPR001839TGF-b_CDomain
IPR015615TGF-beta-likeFamily
IPR017948TGFb_CSConserved_site
IPR029034Cystine-knot_cytokineHomologous_superfamily

Pfam: PF00019, PF00688

UniProt features (50 total): strand 20, helix 10, disulfide bond 5, turn 5, sequence variant 3, signal peptide 1, propeptide 1, sequence conflict 1, chain 1, region of interest 1, compositionally biased region 1, glycosylation site 1

Structure

Experimental structures (PDB)

16 structures.

PDBMethodResolution (Å)
9I5WX-RAY DIFFRACTION1.77
2ARPX-RAY DIFFRACTION2
2ARVX-RAY DIFFRACTION2
6Y6NX-RAY DIFFRACTION2.03
6Y6OX-RAY DIFFRACTION2.04
4MIDX-RAY DIFFRACTION2.14
1S4YX-RAY DIFFRACTION2.3
5HLYX-RAY DIFFRACTION2.3
3B4VX-RAY DIFFRACTION2.48
2B0UX-RAY DIFFRACTION2.8
5HLZX-RAY DIFFRACTION2.85
1NYSX-RAY DIFFRACTION3.05
1NYUX-RAY DIFFRACTION3.1
7U5PX-RAY DIFFRACTION3.14
7OLYX-RAY DIFFRACTION3.27
2P6AX-RAY DIFFRACTION3.4

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P08476-F176.920.42

Antibody-complex structures (SAbDab): 17OLY

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Disulfide bonds (5): 390, 314–322, 321–391, 350–423, 354–425

Glycosylation sites (1): 165

Function

Pathways and Gene Ontology

Reactome pathways

11 pathways

IDPathway
R-HSA-1502540Signaling by Activin
R-HSA-201451Signaling by BMP
R-HSA-209822Glycoprotein hormones
R-HSA-2473224Antagonism of Activin by Follistatin
R-HSA-9839406TGFBR3 regulates activin signaling
R-HSA-162582Signal Transduction
R-HSA-209952Peptide hormone biosynthesis
R-HSA-2980736Peptide hormone metabolism
R-HSA-392499Metabolism of proteins
R-HSA-9006936Signaling by TGFB family members
R-HSA-9839373Signaling by TGFBR3

MSigDB gene sets: 643 (showing top): GOBP_MYELOID_CELL_DIFFERENTIATION, GOBP_SMAD_PROTEIN_SIGNAL_TRANSDUCTION, TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_6HR_DN, GOBP_REGULATION_OF_CELL_ACTIVATION, GOBP_HEMOGLOBIN_METABOLIC_PROCESS, TURASHVILI_BREAST_LOBULAR_CARCINOMA_VS_DUCTAL_NORMAL_UP, GOBP_HEMATOPOIETIC_PROGENITOR_CELL_DIFFERENTIATION, TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_MONOCYTE_UP, MODULE_92, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, GOBP_POSITIVE_REGULATION_OF_REPRODUCTIVE_PROCESS, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_NEGATIVE_REGULATION_OF_CELL_DEVELOPMENT, FREAC2_01, GOBP_POSITIVE_REGULATION_OF_ERYTHROCYTE_DIFFERENTIATION

GO Biological Process (68): ovarian follicle development (GO:0001541), hair follicle development (GO:0001942), hematopoietic progenitor cell differentiation (GO:0002244), regulation of transcription by RNA polymerase II (GO:0006357), transcription by RNA polymerase II (GO:0006366), autophagy (GO:0006914), defense response (GO:0006952), cell surface receptor signaling pathway (GO:0007166), cell surface receptor protein serine/threonine kinase signaling pathway (GO:0007178), cell-cell signaling (GO:0007267), nervous system development (GO:0007399), androgen metabolic process (GO:0008209), negative regulation of cell population proliferation (GO:0008285), male gonad development (GO:0008584), positive regulation of gene expression (GO:0010628), cytokine-mediated signaling pathway (GO:0019221), striatal medium spiny neuron differentiation (GO:0021773), cell differentiation (GO:0030154), erythrocyte differentiation (GO:0030218), negative regulation of cell growth (GO:0030308), negative regulation of type II interferon production (GO:0032689), activin receptor signaling pathway (GO:0032924), positive regulation of collagen biosynthetic process (GO:0032967), endodermal cell differentiation (GO:0035987), negative regulation of phosphorylation (GO:0042326), odontogenesis (GO:0042476), hemoglobin biosynthetic process (GO:0042541), progesterone secretion (GO:0042701), negative regulation of B cell differentiation (GO:0045578), positive regulation of erythrocyte differentiation (GO:0045648), negative regulation of macrophage differentiation (GO:0045650), positive regulation of DNA-templated transcription (GO:0045893), positive regulation of transcription by RNA polymerase II (GO:0045944), positive regulation of transcription by RNA polymerase III (GO:0045945), regulation of follicle-stimulating hormone secretion (GO:0046880), positive regulation of follicle-stimulating hormone secretion (GO:0046881), negative regulation of follicle-stimulating hormone secretion (GO:0046882), mesodermal cell differentiation (GO:0048333), positive regulation of protein metabolic process (GO:0051247), Sertoli cell differentiation (GO:0060008)

GO Molecular Function (9): cytokine activity (GO:0005125), hormone activity (GO:0005179), growth factor activity (GO:0008083), peptide hormone binding (GO:0017046), identical protein binding (GO:0042802), protein-containing complex binding (GO:0044877), type II activin receptor binding (GO:0070699), signaling receptor binding (GO:0005102), protein binding (GO:0005515)

GO Cellular Component (6): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), activin A complex (GO:0043509), inhibin A complex (GO:0043512), perinuclear region of cytoplasm (GO:0048471), enzyme activator complex (GO:0150005)

Reactome top-level categories

Rollup of top-7 pathways:

CategoryPathways
Signaling by TGFB family members3
Peptide hormone biosynthesis1
Signaling by Activin1
Signaling by TGFBR31
Peptide hormone metabolism1
Metabolism of proteins1
Signal Transduction1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
receptor ligand activity3
anatomical structure development2
negative regulation of cellular process2
protein binding2
binding2
cellular anatomical structure2
female gonad development1
hair cycle process1
skin epidermis development1
hemopoiesis1
cell differentiation1
regulation of DNA-templated transcription1
transcription by RNA polymerase II1
DNA-templated transcription1
catabolic process1
transmembrane transport1
process utilizing autophagic mechanism1
response to stress1
signal transduction1
enzyme-linked receptor protein signaling pathway1
cell communication1
signaling1
system development1
steroid metabolic process1
hormone metabolic process1
cell population proliferation1
regulation of cell population proliferation1
gonad development1
development of primary male sexual characteristics1
gene expression1
regulation of gene expression1
positive regulation of macromolecule biosynthetic process1
cell surface receptor signaling pathway1
cellular response to cytokine stimulus1
striatum development1
forebrain neuron differentiation1
GABAergic neuron differentiation1
cellular developmental process1
myeloid cell differentiation1
erythrocyte homeostasis1

Protein interactions and networks

STRING

2146 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
INHBAACVR2AP27037980
INHBAACVR2BQ13705904
INHBAFSTP19883899
INHBAINHBBP09529874
INHBAINHAP05111863
INHBAIGSF1Q8N6C5845
INHBAACVR1BP36896814
INHBAACVR1CQ8NER5804
INHBABMPERQ8N8U9712
INHBAFSTL3O95633638
INHBASMAD3P84022637
INHBATHBS2P35442629
INHBASMAD7O15105550
INHBACOL1A2P02464549
INHBACOL3A1P02461546

IntAct

37 interactions, top by confidence:

ABTypeScore
FstINHBApsi-mi:“MI:0407”(direct interaction)0.560
INHBAFstpsi-mi:“MI:0407”(direct interaction)0.560
INHBAAKT1psi-mi:“MI:0915”(physical association)0.550
INHBAAKT1psi-mi:“MI:2364”(proximity)0.550
AKT1INHBApsi-mi:“MI:0915”(physical association)0.550
CD44PDPK1psi-mi:“MI:0914”(association)0.530
TMEM106AB4GALT3psi-mi:“MI:0914”(association)0.530
INHBABRAFpsi-mi:“MI:2364”(proximity)0.470
INHBABRAFpsi-mi:“MI:0915”(physical association)0.470
INHBACFTRpsi-mi:“MI:0915”(physical association)0.370
GINM1FAM234Bpsi-mi:“MI:0914”(association)0.350
ACVR2BINHBApsi-mi:“MI:0914”(association)0.350
ADIPOQAGRNpsi-mi:“MI:0914”(association)0.350
C1orf54QSOX1psi-mi:“MI:0914”(association)0.350
C1QTNF9BDNASE2psi-mi:“MI:0914”(association)0.350
INHAMOCS3psi-mi:“MI:0914”(association)0.350
LYPD1ADAM10psi-mi:“MI:0914”(association)0.350
PATE1AGRNpsi-mi:“MI:0914”(association)0.350
FBXW7INHBApsi-mi:“MI:2364”(proximity)0.270
SMAD4INHBApsi-mi:“MI:2364”(proximity)0.270
INHBASMARCA4psi-mi:“MI:2364”(proximity)0.270
SMARCA4INHBApsi-mi:“MI:2364”(proximity)0.270

BioGRID (29): INHBA (Reconstituted Complex), INHBA (Reconstituted Complex), ALDH4A1 (Co-fractionation), LYPLAL1 (Co-fractionation), INHBA (Co-fractionation), IDH2 (Co-fractionation), HMGCL (Co-fractionation), MSRB2 (Co-fractionation), INHBA (Affinity Capture-Western), ACVR2A (Affinity Capture-Western), ACVR2B (Affinity Capture-Western), ACVR1B (Affinity Capture-Western), INHBA (Affinity Capture-MS), INHBA (Affinity Capture-MS), INHBA (Affinity Capture-MS)

ESM2 similar proteins: A4IIK7, A8K855, B5MFE9, D3Z2R5, E7F240, F1QPX0, F1R520, O94985, P03970, P07995, P08476, P10600, P17125, P18331, P23352, P27092, P33005, P43032, P55102, Q04998, Q08761, Q0VCN6, Q15198, Q2PFX1, Q5BIP2, Q5R2I8, Q5R2J4, Q5R9Q9, Q5RJP7, Q66KI8, Q68CR1, Q6DF34, Q6GNK9, Q6PE55, Q6Q0N0, Q6X2S4, Q7T2L7, Q7Z494, Q80TS8, Q8BR86

Diamond homologs: A8E7N9, G5EEL5, O08717, O18828, O18830, O19006, O42222, O46564, O46576, O88959, O95390, O95393, O95972, P03970, P07713, P07995, P08476, P09534, P12643, P12644, P12645, P18075, P18331, P20722, P20863, P21274, P21275, P22003, P22004, P22444, P23359, P25703, P27092, P27539, P30884, P30885, P30886, P34820, P34821, P34822

SIGNOR signaling

5 interactions.

AEffectBMechanism
FST“down-regulates activity”INHBAbinding
INHBA“up-regulates activity”ACVR2Abinding
INHBA“up-regulates activity”ACVR2Bbinding
IRX1“up-regulates quantity by expression”INHBA“transcriptional regulation”

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 28 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

GO biological processes:

GO termPartnersFoldFDR
epidermal growth factor receptor signaling pathway553.9×2e-05

Disease & clinical

Clinical variants and AI predictions

ClinVar

41 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance37
Likely benign0
Benign1

Top pathogenic / likely-pathogenic (0)

SpliceAI

612 predictions. Top by Δscore:

VariantEffectΔscore
7:41690350:T:TAdonor_gain1.0000
7:41690134:T:TAdonor_gain0.9900
7:41690140:T:TAdonor_gain0.9900
7:41690157:G:Adonor_gain0.9900
7:41690363:C:Adonor_gain0.9900
7:41690561:A:Cacceptor_gain0.9900
7:41694155:G:Cdonor_gain0.9900
7:41702999:CATTA:Cdonor_loss0.9900
7:41703000:ATTAC:Adonor_loss0.9900
7:41703001:TTACC:Tdonor_loss0.9900
7:41703002:TA:Tdonor_loss0.9900
7:41703003:A:Cdonor_loss0.9900
7:41703004:C:CTdonor_loss0.9900
7:41703004:CCTTT:Cdonor_gain0.9900
7:41690362:T:TAdonor_gain0.9800
7:41690543:C:CAacceptor_loss0.9800
7:41690544:T:Cacceptor_loss0.9800
7:41690549:A:ACacceptor_gain0.9800
7:41690549:A:Cacceptor_gain0.9800
7:41690557:CAGCA:Cacceptor_gain0.9800
7:41690558:A:Tacceptor_gain0.9800
7:41690560:C:CTacceptor_gain0.9800
7:41690128:T:TAdonor_gain0.9700
7:41690185:T:Adonor_gain0.9700
7:41690538:TGTTC:Tacceptor_gain0.9700
7:41690541:TC:Tacceptor_gain0.9700
7:41690542:CC:Cacceptor_gain0.9700
7:41690543:C:CCacceptor_gain0.9700
7:41692662:T:TCacceptor_gain0.9700
7:41694151:A:Cdonor_gain0.9700

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000119442 (7:41705435 T>C), RS1000132102 (7:41695521 G>A), RS1000367260 (7:41698452 A>G), RS1000379176 (7:41684826 C>T), RS1000424417 (7:41692266 C>A), RS1000456034 (7:41703897 G>C), RS1000524632 (7:41703573 G>A), RS1000760776 (7:41691096 G>A,C), RS1000913579 (7:41700431 C>A,G,T), RS1001043439 (7:41705934 G>A,T), RS1001102699 (7:41697214 A>G), RS1001114650 (7:41706920 G>T), RS1001426364 (7:41693731 T>C), RS1001639993 (7:41706617 A>G), RS1001765662 (7:41700055 A>C,G)

Disease associations

OMIM: gene MIM:147290 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

7 associations (top):

StudyTraitp-value
GCST000880_38Menarche (age at onset)6.000000e-14
GCST001897_4Pit-and-Fissure caries7.000000e-06
GCST002371_2Parent of origin effect on language impairment (paternal)4.000000e-07
GCST002541_59Menarche (age at onset)9.000000e-24
GCST003993_37Menarche (age at onset)4.000000e-10
GCST004780_6Cortisol levels (saliva)1.000000e-06
GCST005212_23Asthma4.000000e-06

EFO canonical traits (2, from GWAS)

EFO IDTrait name
EFO:0004703age at menarche
EFO:0005843cortisol measurement

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL3588735 (SINGLE PROTEIN)

PharmGKB: 1 entry (VIP=true, CPIC=false)

PharmGKB variants

1 variants.

VariantGenesLevelScore#Clin annotsDrugs
rs2237435INHBA0.000

CTD chemical–gene interactions

124 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Estradiolaffects cotreatment, decreases expression, decreases reaction, increases expression, affects binding (+2 more)7
Progesteroneaffects binding, affects cotreatment, increases secretion, increases expression, decreases expression (+3 more)6
Valproic Aciddecreases methylation, affects cotreatment, increases expression6
sodium arsenitedecreases expression, increases expression5
Air Pollutantsincreases expression, affects cotreatment, decreases expression, increases abundance5
Cadmiumincreases abundance, increases expression, decreases secretion4
Asbestos, Crocidoliteincreases expression, affects expression, decreases expression4
Particulate Matterincreases reaction, increases abundance, increases expression, decreases expression, affects expression4
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamidedecreases reaction, increases expression, increases phosphorylation, increases secretion, affects cotreatment3
Acetaminophendecreases expression, increases expression3
Oxygenincreases expression, decreases expression3
Silicon Dioxideincreases expression3
Nanotubes, Carbonincreases expression, decreases expression3
methylmercuric chlorideincreases expression2
2,4,5,2’,4’,5’-hexachlorobiphenylincreases expression2
entinostatincreases expression, affects cotreatment2
belinostatincreases expression, affects cotreatment2
(+)-JQ1 compoundaffects cotreatment, decreases expression2
Arsenic Trioxideaffects cotreatment, decreases expression2
Benzo(a)pyrenedecreases expression, increases methylation2
Busulfandecreases reaction, increases expression2
Calcitrioldecreases expression, increases expression, decreases reaction2
Dexamethasonedecreases expression, affects cotreatment2
Doxorubicinaffects response to substance, affects expression2
Lipopolysaccharidesincreases expression, affects cotreatment, decreases reaction2
Tobacco Smoke Pollutionaffects expression, increases expression2
Tretinoinaffects cotreatment, decreases expression, increases expression2
8-Bromo Cyclic Adenosine Monophosphateincreases expression2
Cyclosporinedecreases expression2
Aflatoxin B1decreases expression, decreases methylation2

ChEMBL screening assays

3 unique, capped per target: 3 binding

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL3592247BindingInhibition of interaction of activin A (unknown origin)/ActRIIA-ECD complex with ALK4-ECD-Fc after 120 secs by competitive binding/ Blitz binding assayVirtual High-Throughput Screening To Identify Novel Activin Antagonists. — J Med Chem

Cellosaurus cell lines

1 cell lines: 1 cancer cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_B9KUAbcam A-549 INHBA KOCancer cell lineMale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.