INHBC
gene geneOn this page
Summary
INHBC (inhibin subunit beta C, HGNC:6068) is a protein-coding gene on chromosome 12q13.3, encoding Inhibin beta C chain (P55103). Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland.
This gene encodes a member of the TGF-beta (transforming growth factor-beta) superfamily of proteins. The encoded preproprotein is proteolytically processed to generate a subunit of homodimeric and heterodimeric activin complexes. The heterodimeric complex may function in the inhibition of activin A signaling. Transgenic mice overexpressing this gene exhibit defects in testis, liver and prostate.
Source: NCBI Gene 3626 — RefSeq curated summary.
At a glance
- GWAS associations: 32
- Clinical variants (ClinVar): 48 total
- MANE Select transcript:
NM_005538
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6068 |
| Approved symbol | INHBC |
| Name | inhibin subunit beta C |
| Location | 12q13.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000175189 |
| Ensembl biotype | protein_coding |
| OMIM | 601233 |
| Entrez | 3626 |
Gene structure
Transcript identifiers
Ensembl transcripts: 1 — 1 protein_coding
ENST00000309668
RefSeq mRNA: 1 — MANE Select: NM_005538
NM_005538
CCDS: CCDS8938
Canonical transcript exons
ENST00000309668 — 2 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001179441 | 57449277 | 57452062 |
| ENSE00001290462 | 57434784 | 57435199 |
Expression profiles
Bgee: expression breadth broad, 43 present calls, max score 95.97.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.6041 / max 281.1764, expressed in 14 samples.
FANTOM5 promoters (10 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 126203 | 0.2514 | 7 |
| 126201 | 0.1023 | 10 |
| 126204 | 0.0688 | 6 |
| 126206 | 0.0456 | 8 |
| 126205 | 0.0333 | 7 |
| 126202 | 0.0305 | 6 |
| 126200 | 0.0262 | 7 |
| 126207 | 0.0185 | 7 |
| 126198 | 0.0141 | 7 |
| 126199 | 0.0134 | 8 |
Top tissues by expression
232 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right lobe of liver | UBERON:0001114 | 95.97 | gold quality |
| liver | UBERON:0002107 | 86.13 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 80.44 | gold quality |
| endometrium epithelium | UBERON:0004811 | 66.12 | gold quality |
| frontal pole | UBERON:0002795 | 66.06 | gold quality |
| tibialis anterior | UBERON:0001385 | 65.83 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 65.78 | gold quality |
| paraflocculus | UBERON:0005351 | 65.71 | gold quality |
| cerebellar vermis | UBERON:0004720 | 65.60 | gold quality |
| diaphragm | UBERON:0001103 | 65.49 | gold quality |
| pancreatic ductal cell | CL:0002079 | 63.05 | silver quality |
| sperm | CL:0000019 | 60.47 | gold quality |
| male germ cell | CL:0000015 | 59.82 | gold quality |
| ileal mucosa | UBERON:0000331 | 59.58 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 59.56 | gold quality |
| oocyte | CL:0000023 | 59.26 | gold quality |
| mucosa of urinary bladder | UBERON:0001259 | 57.05 | gold quality |
| deltoid | UBERON:0001476 | 55.74 | silver quality |
| thymus | UBERON:0002370 | 55.70 | gold quality |
| quadriceps femoris | UBERON:0001377 | 55.55 | gold quality |
| colonic epithelium | UBERON:0000397 | 53.21 | gold quality |
| vastus lateralis | UBERON:0001379 | 53.16 | gold quality |
| upper leg skin | UBERON:0004262 | 51.90 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 51.73 | silver quality |
| metanephric glomerulus | UBERON:0004736 | 50.57 | gold quality |
| blood vessel layer | UBERON:0004797 | 50.54 | gold quality |
| cortical plate | UBERON:0005343 | 50.43 | gold quality |
| ventricular zone | UBERON:0003053 | 50.14 | gold quality |
| nephron tubule | UBERON:0001231 | 50.13 | gold quality |
| renal glomerulus | UBERON:0000074 | 49.85 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-99795 | no | 10.54 |
| E-ANND-3 | no | 1.63 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
103 targeting INHBC, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4283 | 100.00 | 66.42 | 2097 |
| HSA-MIR-6748-5P | 100.00 | 65.81 | 1057 |
| HSA-MIR-1252-5P | 100.00 | 69.80 | 2774 |
| HSA-MIR-4747-5P | 100.00 | 67.90 | 2681 |
| HSA-MIR-5196-5P | 100.00 | 67.98 | 2761 |
| HSA-MIR-4673 | 100.00 | 66.64 | 1490 |
| HSA-MIR-6870-5P | 99.99 | 68.55 | 2115 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-4723-5P | 99.97 | 68.70 | 2034 |
| HSA-MIR-5698 | 99.97 | 68.49 | 2029 |
| HSA-MIR-7111-5P | 99.97 | 68.48 | 2062 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-9983-3P | 99.94 | 71.48 | 3631 |
| HSA-MIR-1297 | 99.91 | 73.41 | 3162 |
| HSA-MIR-129-5P | 99.88 | 70.26 | 3273 |
| HSA-MIR-3919 | 99.87 | 69.45 | 2489 |
| HSA-MIR-3151-5P | 99.86 | 63.83 | 1069 |
| HSA-MIR-4447 | 99.85 | 67.81 | 2900 |
| HSA-MIR-1321 | 99.84 | 65.30 | 1811 |
| HSA-MIR-4739 | 99.84 | 65.25 | 1832 |
| HSA-MIR-4756-5P | 99.84 | 64.98 | 1809 |
| HSA-MIR-8080 | 99.82 | 67.52 | 1342 |
| HSA-MIR-34B-5P | 99.78 | 67.56 | 1175 |
| HSA-MIR-449C-5P | 99.78 | 67.63 | 1168 |
| HSA-MIR-1299 | 99.77 | 71.24 | 2389 |
| HSA-MIR-3934-3P | 99.76 | 65.51 | 1351 |
| HSA-MIR-3680-3P | 99.75 | 72.51 | 3095 |
| HSA-MIR-2682-5P | 99.73 | 67.38 | 1055 |
| HSA-MIR-1296-3P | 99.72 | 64.04 | 636 |
| HSA-MIR-3202 | 99.66 | 67.70 | 2737 |
Literature-anchored findings (GeneRIF, showing 17)
- Results quantify the relative expression of inhibin alpha, inhibin/activin beta(A), beta(B), beta(C), follistatin, activin receptors and beta-glycan genes in placental tissue of term pre-eclamptic patients. (PMID:12651901)
- Role for the activin betaC-subunit as a regulatory mechanism to reduce activin A secretion via intracellular heterodimerization. (PMID:12960042)
- activin betaC subunit may exert its effect as inhibin C (PMID:16627954)
- activin-beta(C) is an antagonist of activin A (PMID:19095948)
- Expression of the inhibin betaC and betaE subunits was demonstrated at the protein level and at the transcriptional level in normal human endometrial tissue and in the Ishikawa human endometrial carcinoma cell line. (PMID:20012305)
- Expression of inhibin beta C was detected in the human chorionic carcinoma cell lines JEG and BeWoand also in human placenta. (PMID:20458061)
- in endometrial cancer tissue demonstrated a significant association with hemangiosis although without any impact on the patients’ survival (PMID:20683603)
- the novel inhibin/activin-betaC subunit is expressed in human endometrioid adenocarcinomas and in the human endometrial carcinoma cell line HEC-1a (PMID:20952735)
- differential expression pattern of the betaC- and betaE-subunits in normal human endometrial tissue suggests that they function in endometrial maturation and blastocyst implantation. (PMID:21092084)
- inhibin-betaC in normal and pathological placental tissue was demonstrated, although no differences in staining intensity could be observed. Functional role of novel inhibin-betaC subunit in normal and pathological human placenta is still quite unclear. (PMID:21117833)
- Data show that inhibin A levels were significantly lower in the PCOS group compared to the control group, and inhibin B levels were comparable in the two groups. (PMID:21529351)
- Activin-beta(C) is a regulator of activin-A. Activin-beta(C) is able to abolish cachexia and modulate reproductive tumour development in inhibin alpha-subunit knockout mice (alpha-KO) mice. (PMID:23180294)
- Single Nucleotide Polymorphisms in INHBC gene is associated with brain metastasis in non-small-cell lung cancer (PMID:23284751)
- The inhibin-betaC subunit is down-regulated, while inhibin-betaE is up-regulated by interferon-beta1a in Ishikawa carcinoma cell line. (PMID:23580013)
- Serum inhibin levels correlate with clinical characteristics and mortality in epithelial ovarian cancer patients. (PMID:24599287)
- Activin A, B, and AB have similar effects on steroidogenesis in human granulosa cells; in contrast, activin AC is not biologically active and does not act as a competitive antagonist. (PMID:25062451)
- Study shows an up-regulation of activin-C in aggressive prostate cancer only, suggesting that activin-C may play a role in the advanced stages of the disease. (PMID:28116672)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ENSDARG00000100986 | |
| mus_musculus | Inhbc | ENSMUSG00000025405 |
| rattus_norvegicus | Inhbc | ENSRNOG00000007700 |
Paralogs (31): TGFB2 (ENSG00000092969), BMP7 (ENSG00000101144), TGFB1 (ENSG00000105329), BMP5 (ENSG00000112175), BMP8B (ENSG00000116985), TGFB3 (ENSG00000119699), INHBA (ENSG00000122641), INHA (ENSG00000123999), BMP4 (ENSG00000125378), BMP2 (ENSG00000125845), GDF5 (ENSG00000125965), GDF1 (ENSG00000130283), BMP15 (ENSG00000130385), GDF15 (ENSG00000130513), GDF11 (ENSG00000135414), MSTN (ENSG00000138379), INHBE (ENSG00000139269), LEFTY2 (ENSG00000143768), GDF7 (ENSG00000143869), BMP3 (ENSG00000152785), BMP6 (ENSG00000153162), GDF6 (ENSG00000156466), NODAL (ENSG00000156574), INHBB (ENSG00000163083), BMP10 (ENSG00000163217), GDF9 (ENSG00000164404), BMP8A (ENSG00000183682), GDF3 (ENSG00000184344), LEFTY1 (ENSG00000243709), GDF2 (ENSG00000263761), GDF10 (ENSG00000266524)
Protein
Protein identifiers
Inhibin beta C chain — P55103 (reviewed: P55103)
Alternative names: Activin beta-C chain
All UniProt accessions (1): P55103
UniProt curated annotations — full annotation on UniProt →
Function. Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition. Inhibins appear to oppose the functions of activins.
Subunit / interactions. Homodimeric or heterodimeric through association with alpha and beta subunits, linked by one or more disulfide bonds. Inhibins are heterodimers of one alpha and one beta subunit. Activins are homo- or heterodimers of beta subunits only.
Subcellular location. Secreted.
Tissue specificity. Expressed in benign prostatic hyperplasia.
Similarity. Belongs to the TGF-beta family.
RefSeq proteins (1): NP_005529* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001318 | Inhibin_betaC | Family |
| IPR001839 | TGF-b_C | Domain |
| IPR015615 | TGF-beta-like | Family |
| IPR017948 | TGFb_CS | Conserved_site |
| IPR029034 | Cystine-knot_cytokine | Homologous_superfamily |
Pfam: PF00019
UniProt features (12 total): disulfide bond 5, glycosylation site 3, signal peptide 1, propeptide 1, sequence variant 1, chain 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P55103-F1 | 75.21 | 0.23 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Disulfide bonds (5): 316, 240–248, 247–317, 276–349, 280–351
Glycosylation sites (3): 110, 143, 161
Function
Pathways and Gene Ontology
Reactome pathways
4 pathways
| ID | Pathway |
|---|---|
| R-HSA-209822 | Glycoprotein hormones |
| R-HSA-209952 | Peptide hormone biosynthesis |
| R-HSA-2980736 | Peptide hormone metabolism |
| R-HSA-392499 | Metabolism of proteins |
MSigDB gene sets: 96 (showing top):
MODULE_52, MODULE_45, GOMF_GROWTH_FACTOR_ACTIVITY, AAAYRNCTG_UNKNOWN, MODULE_379, KOYAMA_SEMA3B_TARGETS_UP, HNF4_01, PPAR_DR1_Q2, MODULE_88, GOMF_CYTOKINE_ACTIVITY, VANTVEER_BREAST_CANCER_ESR1_DN, MODULE_242, GOMF_SIGNALING_RECEPTOR_BINDING, MODULE_18, RASHI_RESPONSE_TO_IONIZING_RADIATION_5
GO Biological Process (1): cell surface receptor protein serine/threonine kinase signaling pathway (GO:0007178)
GO Molecular Function (4): cytokine activity (GO:0005125), transforming growth factor beta receptor binding (GO:0005160), hormone activity (GO:0005179), growth factor activity (GO:0008083)
GO Cellular Component (2): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615)
Reactome top-level categories
Rollup of top-3 pathways:
| Category | Pathways |
|---|---|
| Peptide hormone biosynthesis | 1 |
| Peptide hormone metabolism | 1 |
| Metabolism of proteins | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| receptor ligand activity | 3 |
| enzyme-linked receptor protein signaling pathway | 1 |
| cytokine receptor binding | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
680 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| INHBC | R3HDM2 | Q9Y2K5 | 581 |
| INHBC | SLC17A1 | Q14916 | 554 |
| INHBC | SLC16A9 | Q7RTY1 | 545 |
| INHBC | SLC22A11 | Q9NSA0 | 536 |
| INHBC | RREB1 | Q92766 | 494 |
| INHBC | SLC2A9 | Q9NRM0 | 492 |
| INHBC | FST | P19883 | 475 |
| INHBC | PDZK1 | Q5T2W1 | 454 |
| INHBC | INHA | P05111 | 444 |
| INHBC | ACVR1B | P36896 | 403 |
| INHBC | AMHR2 | Q16671 | 401 |
| INHBC | BMPR1B | P78366 | 399 |
| INHBC | VLDLR | P98155 | 399 |
| INHBC | SLC22A12 | Q96S37 | 396 |
| INHBC | A1CF | Q9NQ94 | 395 |
IntAct
0 interactions, top by confidence:
ESM2 similar proteins: A5PJ93, E9PY61, H2N4I1, O00391, O08717, P01180, P01183, P08833, P21743, P24591, P43031, P47876, P51693, P55103, P58166, Q03157, Q15904, Q28686, Q561R0, Q58CS8, Q5Q0T9, Q5RJL6, Q6AZ60, Q6IUU3, Q6PRD1, Q6Q484, Q6S5C2, Q75ZP3, Q80WF4, Q80YF6, Q864V4, Q8BND5, Q8C1Q4, Q8CAL5, Q8CEF9, Q8CG70, Q8CJ26, Q8IVL6, Q8JGM4, Q8K5A9
Diamond homologs: A1C2U3, A1C2U6, A1C2U7, A1C2V0, A1C2V5, A8E7N9, G5EEL5, O08689, O14793, O18828, O18830, O18831, O18836, O35312, O42220, O42221, O42222, O46576, O61643, O95390, O95393, P09534, P12644, P12645, P17491, P18075, P20722, P20863, P22003, P22004, P22444, P23359, P27091, P27539, P35621, P43026, P43027, P43028, P43029, P48970
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
48 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 42 |
| Likely benign | 3 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
125 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 12:57435170:A:T | donor_gain | 1.0000 |
| 12:57435169:G:GT | donor_gain | 0.9900 |
| 12:57435195:GACAG:G | donor_gain | 0.9900 |
| 12:57435200:G:GC | donor_loss | 0.9900 |
| 12:57435201:T:A | donor_loss | 0.9900 |
| 12:57435200:G:GG | donor_gain | 0.9400 |
| 12:57449268:T:G | acceptor_loss | 0.9400 |
| 12:57449271:CCACA:C | acceptor_loss | 0.9400 |
| 12:57449272:CACA:C | acceptor_loss | 0.9400 |
| 12:57449273:ACAG:A | acceptor_loss | 0.9400 |
| 12:57449274:C:G | acceptor_loss | 0.9400 |
| 12:57449275:A:AG | acceptor_gain | 0.9400 |
| 12:57449275:A:AT | acceptor_loss | 0.9400 |
| 12:57449276:G:C | acceptor_loss | 0.9400 |
| 12:57449276:G:GG | acceptor_gain | 0.9400 |
| 12:57449267:AT:A | acceptor_loss | 0.9300 |
| 12:57449270:TCCA:T | acceptor_loss | 0.9300 |
| 12:57435163:G:T | donor_gain | 0.9100 |
| 12:57449269:GTCC:G | acceptor_loss | 0.8900 |
| 12:57449276:GGC:G | acceptor_gain | 0.8500 |
| 12:57449261:CTTCT:C | acceptor_loss | 0.8200 |
| 12:57449262:TTCTT:T | acceptor_loss | 0.8200 |
| 12:57435545:TGG:T | donor_gain | 0.8100 |
| 12:57435546:GGG:G | donor_gain | 0.8100 |
| 12:57449276:GGCCT:G | acceptor_gain | 0.7700 |
| 12:57449264:CTTAT:C | acceptor_loss | 0.7500 |
| 12:57438780:A:G | acceptor_gain | 0.7200 |
| 12:57449260:GCTTC:G | acceptor_loss | 0.7200 |
| 12:57449252:T:G | acceptor_loss | 0.7100 |
| 12:57448786:A:T | donor_gain | 0.7000 |
AlphaMissense
2281 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 12:57449755:G:C | W264C | 0.996 |
| 12:57449755:G:T | W264C | 0.996 |
| 12:57449746:G:C | W261C | 0.994 |
| 12:57449746:G:T | W261C | 0.994 |
| 12:57449730:T:G | F256C | 0.993 |
| 12:57449744:T:A | W261R | 0.991 |
| 12:57449744:T:C | W261R | 0.991 |
| 12:57449753:T:A | W264R | 0.990 |
| 12:57449753:T:C | W264R | 0.990 |
| 12:57449789:T:A | C276S | 0.990 |
| 12:57449790:G:C | C276S | 0.990 |
| 12:57449729:T:C | F256L | 0.989 |
| 12:57449731:C:A | F256L | 0.989 |
| 12:57449731:C:G | F256L | 0.989 |
| 12:57449790:G:A | C276Y | 0.988 |
| 12:57449791:C:G | C276W | 0.988 |
| 12:57449757:T:C | I265T | 0.987 |
| 12:57449801:T:A | C280S | 0.986 |
| 12:57449802:G:C | C280S | 0.986 |
| 12:57449730:T:C | F256S | 0.985 |
| 12:57449757:T:G | I265S | 0.981 |
| 12:57449790:G:T | C276F | 0.980 |
| 12:57449784:A:T | N274I | 0.978 |
| 12:57449789:T:C | C276R | 0.978 |
| 12:57449943:T:C | L327P | 0.978 |
| 12:57450009:G:A | C349Y | 0.978 |
| 12:57449801:T:C | C280R | 0.977 |
| 12:57450014:T:A | C351S | 0.977 |
| 12:57450015:G:C | C351S | 0.977 |
| 12:57449912:T:A | C317S | 0.975 |
dbSNP variants (sampled 300 via entrez): RS1000015848 (12:57442281 C>T), RS1000044471 (12:57434450 C>T), RS1000089016 (12:57442628 A>G), RS1000123473 (12:57435066 C>T), RS1000189606 (12:57433545 G>A), RS1000878316 (12:57448928 G>C), RS1001325741 (12:57441640 A>G), RS1001328649 (12:57449303 C>G,T), RS1001406081 (12:57436129 G>A,C), RS1001474783 (12:57449747 C>G,T), RS1001557370 (12:57433955 C>T), RS1002050629 (12:57433790 C>T), RS1002223302 (12:57443151 C>A,G), RS1002289223 (12:57435680 A>G,T), RS1002481400 (12:57450183 C>A,T)
Disease associations
OMIM: gene MIM:601233 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
32 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000818_9 | Urate levels | 2.000000e-11 |
| GCST001791_11 | Urate levels | 2.000000e-25 |
| GCST002829_23 | Urate levels in overweight individuals | 2.000000e-07 |
| GCST002829_35 | Urate levels in overweight individuals | 4.000000e-08 |
| GCST003372_38 | Glomerular filtration rate (creatinine) | 2.000000e-09 |
| GCST006585_2703 | Blood protein levels | 5.000000e-06 |
| GCST007576_241 | Chronotype | 2.000000e-09 |
| GCST007733_34 | Serum uric acid levels | 4.000000e-24 |
| GCST007920_2 | Chronic kidney disease | 2.000000e-16 |
| GCST008070_35 | HDL cholesterol levels | 3.000000e-09 |
| GCST008070_84 | HDL cholesterol levels | 2.000000e-09 |
| GCST008074_119 | Triglyceride levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df) | 5.000000e-12 |
| GCST008074_145 | Triglyceride levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df) | 5.000000e-12 |
| GCST008075_104 | HDL cholesterol levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df) | 7.000000e-19 |
| GCST008075_34 | HDL cholesterol levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df) | 8.000000e-19 |
| GCST008083_162 | Triglyceride levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df) | 5.000000e-13 |
| GCST008083_95 | Triglyceride levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df) | 2.000000e-13 |
| GCST008084_227 | HDL cholesterol levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df) | 1.000000e-20 |
| GCST008084_45 | HDL cholesterol levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df) | 1.000000e-20 |
| GCST008085_142 | HDL cholesterol levels in current drinkers | 2.000000e-12 |
| GCST008085_23 | HDL cholesterol levels in current drinkers | 1.000000e-12 |
| GCST008745_2 | Estimated glomerular filtration rate in non-diabetics | 4.000000e-13 |
| GCST008916_2 | Asthma | 2.000000e-08 |
| GCST008972_150 | Urate levels | 7.000000e-65 |
| GCST010083_337 | Hemoglobin levels | 4.000000e-14 |
| GCST010241_124 | Apolipoprotein A1 levels | 2.000000e-33 |
| GCST010242_461 | HDL cholesterol levels | 6.000000e-43 |
| GCST010637_19 | Urate levels | 4.000000e-22 |
| GCST011334_9 | Body mass index and triglycerides (pairwise) | 1.000000e-12 |
| GCST011336_9 | Body mass index and HDL-C (pairwise) | 2.000000e-13 |
EFO canonical traits (10, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004531 | urate measurement |
| EFO:0008328 | chronotype measurement |
| EFO:0004761 | uric acid measurement |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0004530 | triglyceride measurement |
| EFO:0004329 | alcohol drinking |
| EFO:0004509 | hemoglobin measurement |
| EFO:0004614 | apolipoprotein A 1 measurement |
| EFO:0004340 | body mass index |
| EFO:0004736 | aspartate aminotransferase measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
23 total (human), top 23 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases expression, affects expression, affects cotreatment, increases methylation | 3 |
| Benzo(a)pyrene | decreases expression, increases methylation | 3 |
| Cyclosporine | decreases expression | 2 |
| fulvic acid | increases expression, affects cotreatment, decreases reaction | 1 |
| methyleugenol | decreases expression | 1 |
| S-(1,2-dichlorovinyl)cysteine | increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| perfluoro-n-nonanoic acid | decreases expression | 1 |
| apatinib | affects cotreatment, increases expression | 1 |
| Calcimycin | decreases reaction, increases expression, affects cotreatment | 1 |
| Arsenic Trioxide | affects cotreatment, increases expression | 1 |
| Fulvestrant | affects cotreatment, increases methylation | 1 |
| Arsenic | affects expression | 1 |
| Dexamethasone | affects cotreatment, decreases expression | 1 |
| Indomethacin | affects cotreatment, decreases expression | 1 |
| Methylcholanthrene | affects binding, increases reaction | 1 |
| Tetradecanoylphorbol Acetate | affects cotreatment, decreases reaction, increases expression | 1 |
| Tretinoin | decreases expression | 1 |
| Urethane | decreases expression | 1 |
| Zinc | decreases expression | 1 |
| 1-Methyl-3-isobutylxanthine | affects cotreatment, decreases expression | 1 |
| Okadaic Acid | decreases expression | 1 |
| Copper Sulfate | decreases expression | 1 |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.