INTS9-AS1

Summary

INTS9-AS1 (INTS9 antisense RNA 1, HGNC:53139) is a long non-coding RNA gene on chromosome 8p21.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53139
Approved symbol	INTS9-AS1
Name	INTS9 antisense RNA 1
Location	8p21.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	ENST00000520055
Ensembl gene	ENSG00000254034
Ensembl biotype	lncRNA
Entrez	109729178
RNAcentral	URS0000DBA91E — lncRNA, 2125 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000520055, ENST00000648646

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000520055 — 2 exons

Exon	Start	End
ENSE00002106560	28799422	28799469
ENSE00002109156	28798142	28798641

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 79.23.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.23	gold quality
bone marrow cell	CL:0002092	66.50	silver quality
colonic epithelium	UBERON:0000397	65.67	silver quality
skeletal muscle tissue	UBERON:0001134	63.60	gold quality
cortical plate	UBERON:0005343	63.60	gold quality
tonsil	UBERON:0002372	62.62	gold quality
lower esophagus mucosa	UBERON:0035834	61.54	gold quality
calcaneal tendon	UBERON:0003701	61.44	gold quality
muscle tissue	UBERON:0002385	60.92	gold quality
right adrenal gland cortex	UBERON:0035827	60.44	gold quality
ganglionic eminence	UBERON:0004023	60.25	gold quality
endometrium	UBERON:0001295	59.69	gold quality
stromal cell of endometrium	CL:0002255	59.39	gold quality
bone marrow	UBERON:0002371	58.48	gold quality
adrenal tissue	UBERON:0018303	58.39	gold quality
right adrenal gland	UBERON:0001233	57.90	gold quality
ventricular zone	UBERON:0003053	57.75	silver quality
hindlimb stylopod muscle	UBERON:0004252	57.43	gold quality
monocyte	CL:0000576	57.17	gold quality
adrenal gland	UBERON:0002369	57.03	gold quality
left adrenal gland	UBERON:0001234	55.95	gold quality
apex of heart	UBERON:0002098	55.87	gold quality
myometrium	UBERON:0001296	55.72	gold quality
blood	UBERON:0000178	55.35	gold quality
primary visual cortex	UBERON:0002436	55.00	gold quality
fundus of stomach	UBERON:0001160	54.84	gold quality
liver	UBERON:0002107	54.81	gold quality
descending thoracic aorta	UBERON:0002345	54.81	gold quality
left adrenal gland cortex	UBERON:0035825	54.75	gold quality
thyroid gland	UBERON:0002046	54.57	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.90

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.