IQCA1-AS1

Summary

IQCA1-AS1 (IQCA1 antisense RNA 1, HGNC:41137) is a long non-coding RNA gene on chromosome 2q37.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41137
Approved symbol	IQCA1-AS1
Name	IQCA1 antisense RNA 1
Location	2q37
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232893
Ensembl biotype	lncRNA
Entrez	107080627
RNAcentral	URS00025E356C — lncRNA, 477 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000413353

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000413353 — 2 exons

Exon	Start	End
ENSE00001619188	236392295	236392388
ENSE00001643448	236391074	236391468

Expression profiles

Bgee: expression breadth broad, 92 present calls, max score 95.72.

Top tissues by expression

92 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	95.72	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.25	gold quality
popliteal artery	UBERON:0002250	59.34	gold quality
tibial artery	UBERON:0007610	59.31	gold quality
mucosa of stomach	UBERON:0001199	56.45	gold quality
monocyte	CL:0000576	55.23	gold quality
prefrontal cortex	UBERON:0000451	55.21	gold quality
blood	UBERON:0000178	54.99	gold quality
urinary bladder	UBERON:0001255	53.50	gold quality
islet of Langerhans	UBERON:0000006	53.41	gold quality
smooth muscle tissue	UBERON:0001135	53.41	gold quality
corpus callosum	UBERON:0002336	53.20	gold quality
adult mammalian kidney	UBERON:0000082	53.17	gold quality
gastrocnemius	UBERON:0001388	52.16	gold quality
lymph node	UBERON:0000029	52.12	gold quality
placenta	UBERON:0001987	52.02	gold quality
kidney	UBERON:0002113	51.25	gold quality
endometrium	UBERON:0001295	50.96	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	50.12	gold quality
body of stomach	UBERON:0001161	49.68	gold quality
right lobe of thyroid gland	UBERON:0001119	49.24	gold quality
myometrium	UBERON:0001296	48.86	gold quality
superior frontal gyrus	UBERON:0002661	48.82	gold quality
thyroid gland	UBERON:0002046	48.73	gold quality
stomach	UBERON:0000945	48.52	gold quality
cerebellar cortex	UBERON:0002129	48.44	silver quality
spleen	UBERON:0002106	48.39	gold quality
cerebellar hemisphere	UBERON:0002245	48.38	silver quality
left lobe of thyroid gland	UBERON:0001120	48.17	gold quality
prostate gland	UBERON:0002367	47.82	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.82

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.