IQCF5-AS1

Summary

IQCF5-AS1 (IQCF5 antisense RNA 1, HGNC:41297) is a long non-coding RNA gene on chromosome 3p21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41297
Approved symbol	IQCF5-AS1
Name	IQCF5 antisense RNA 1
Location	3p21.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235455
Ensembl biotype	lncRNA
Entrez	101928999
RNAcentral	URS00000B4D1D — lncRNA, 2000 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000440723

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000440723 — 3 exons

Exon	Start	End
ENSE00001591655	51873596	51873752
ENSE00001657487	51874388	51875767
ENSE00001782719	51873836	51874298

Expression profiles

Bgee: expression breadth tissue_specific, 8 present calls, max score 93.87.

Top tissues by expression

8 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	93.87	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	85.46	gold quality
blood	UBERON:0000178	63.28	gold quality
right testis	UBERON:0004534	54.57	gold quality
testis	UBERON:0000473	54.04	gold quality
left testis	UBERON:0004533	53.97	gold quality
gastrocnemius	UBERON:0001388	44.94	gold quality
tibial nerve	UBERON:0001323	27.58	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.15

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.