IQCJ-SCHIP1-AS1

Summary

IQCJ-SCHIP1-AS1 (IQCJ-SCHIP1 readthrough antisense RNA 1, HGNC:41303) is a long non-coding RNA gene on chromosome 3q25.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41303
Approved symbol	IQCJ-SCHIP1-AS1
Name	IQCJ-SCHIP1 readthrough antisense RNA 1
Location	3q25.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000241211
Ensembl biotype	lncRNA
Entrez	100874433
RNAcentral	URS0000759A8B — lncRNA, 597 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000460574, ENST00000488247

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000460574 — 2 exons

Exon	Start	End
ENSE00001826668	159765387	159765743
ENSE00001873711	159768304	159768454

Expression profiles

Bgee: expression breadth ubiquitous, 139 present calls, max score 97.04.

Top tissues by expression

239 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	97.04	gold quality
corpus callosum	UBERON:0002336	84.99	gold quality
sperm	CL:0000019	84.43	silver quality
quadriceps femoris	UBERON:0001377	79.30	gold quality
vastus lateralis	UBERON:0001379	79.15	gold quality
skeletal muscle tissue	UBERON:0001134	76.67	gold quality
left testis	UBERON:0004533	76.52	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	75.90	gold quality
colonic epithelium	UBERON:0000397	75.52	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	75.42	gold quality
right testis	UBERON:0004534	75.14	gold quality
deltoid	UBERON:0001476	74.17	gold quality
calcaneal tendon	UBERON:0003701	74.13	gold quality
testis	UBERON:0000473	73.77	gold quality
myocardium	UBERON:0002349	73.72	gold quality
biceps brachii	UBERON:0001507	72.77	gold quality
right uterine tube	UBERON:0001302	72.55	gold quality
pancreatic ductal cell	CL:0002079	72.09	silver quality
tendon	UBERON:0000043	70.44	gold quality
tibialis anterior	UBERON:0001385	70.29	silver quality
ileal mucosa	UBERON:0000331	70.16	silver quality
left ventricle myocardium	UBERON:0006566	69.78	gold quality
cardiac muscle of right atrium	UBERON:0003379	69.66	gold quality
sural nerve	UBERON:0015488	69.11	silver quality
ganglionic eminence	UBERON:0004023	68.55	gold quality
buccal mucosa cell	CL:0002336	67.71	gold quality
upper arm skin	UBERON:0004263	67.41	gold quality
islet of Langerhans	UBERON:0000006	66.67	gold quality
tendon of biceps brachii	UBERON:0008188	66.66	gold quality
right lobe of liver	UBERON:0001114	66.48	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.