IRX1-AS1

Summary

IRX1-AS1 (IRX1 antisense RNA 1, HGNC:58996) is a long non-coding RNA gene on chromosome 5p15.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58996
Approved symbol	IRX1-AS1
Name	IRX1 antisense RNA 1
Location	5p15.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259603
Ensembl biotype	lncRNA
Entrez	144667548

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000559410

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000559410 — 2 exons

Exon	Start	End
ENSE00002543806	3599864	3600188
ENSE00002567848	3596211	3596268

Expression profiles

Bgee: expression breadth broad, 82 present calls, max score 71.36.

Top tissues by expression

82 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
adult mammalian kidney	UBERON:0000082	71.36	gold quality
kidney	UBERON:0002113	69.85	gold quality
cortex of kidney	UBERON:0001225	69.63	gold quality
thoracic mammary gland	UBERON:0005200	68.22	gold quality
tonsil	UBERON:0002372	65.63	gold quality
hindlimb stylopod muscle	UBERON:0004252	63.06	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	62.21	gold quality
islet of Langerhans	UBERON:0000006	59.34	gold quality
lung	UBERON:0002048	57.63	gold quality
lymph node	UBERON:0000029	56.34	gold quality
hypothalamus	UBERON:0001898	55.46	gold quality
zone of skin	UBERON:0000014	54.42	gold quality
skin of abdomen	UBERON:0001416	54.36	gold quality
prefrontal cortex	UBERON:0000451	54.24	gold quality
skin of leg	UBERON:0001511	53.39	gold quality
descending thoracic aorta	UBERON:0002345	53.35	gold quality
calcaneal tendon	UBERON:0003701	53.32	silver quality
cerebellum	UBERON:0002037	52.91	gold quality
blood	UBERON:0000178	52.79	gold quality
right lung	UBERON:0002167	52.48	gold quality
cerebellar cortex	UBERON:0002129	52.14	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	51.90	gold quality
substantia nigra	UBERON:0002038	51.16	gold quality
cerebellar hemisphere	UBERON:0002245	50.11	gold quality
right hemisphere of cerebellum	UBERON:0014890	49.95	gold quality
heart left ventricle	UBERON:0002084	49.80	gold quality
thoracic aorta	UBERON:0001515	49.66	gold quality
gastrocnemius	UBERON:0001388	49.22	gold quality
nucleus accumbens	UBERON:0001882	48.72	gold quality
anterior cingulate cortex	UBERON:0009835	48.45	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.