IRX4-DT

Summary

IRX4-DT (IRX4 divergent transcript, HGNC:58994) is a long non-coding RNA gene on chromosome 5p15.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58994
Approved symbol	IRX4-DT
Name	IRX4 divergent transcript
Location	5p15.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249326
Ensembl biotype	lncRNA
Entrez	101929081

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000514569

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000514569 — 4 exons

Exon	Start	End
ENSE00002030116	1898045	1898119
ENSE00002056151	1899042	1900493
ENSE00002072065	1888213	1888282
ENSE00002078957	1887332	1887369

Expression profiles

Bgee: expression breadth broad, 12 present calls, max score 85.09.

Top tissues by expression

152 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	85.09	silver quality
monocyte	CL:0000576	52.58	silver quality
tibial artery	UBERON:0007610	46.65	gold quality
islet of Langerhans	UBERON:0000006	45.90	silver quality
left ovary	UBERON:0002119	43.40	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
gastrocnemius	UBERON:0001388	42.62	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
aorta	UBERON:0000947	42.15	silver quality
vastus lateralis	UBERON:0001379	41.41	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
adult mammalian kidney	UBERON:0000082	41.34	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
bone marrow	UBERON:0002371	41.14	gold quality
skeletal muscle tissue	UBERON:0001134	41.10	gold quality
palpebral conjunctiva	UBERON:0001812	41.10	gold quality
mucosa of paranasal sinus	UBERON:0005030	40.98	gold quality
adrenal gland	UBERON:0002369	40.94	gold quality
amniotic fluid	UBERON:0000173	40.69	gold quality
nasal cavity mucosa	UBERON:0001826	40.63	gold quality
jejunal mucosa	UBERON:0000399	40.59	gold quality
endometrium	UBERON:0001295	40.57	gold quality
biceps brachii	UBERON:0001507	40.57	gold quality
lower esophagus muscularis layer	UBERON:0035833	40.57	silver quality
epithelium of nasopharynx	UBERON:0001951	40.45	gold quality
myocardium	UBERON:0002349	40.45	gold quality
gingival epithelium	UBERON:0001949	40.43	gold quality
kidney	UBERON:0002113	40.38	gold quality
germinal epithelium of ovary	UBERON:0001304	40.33	gold quality
esophagus squamous epithelium	UBERON:0006920	40.29	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.