ITFG1-AS1

Summary

ITFG1-AS1 (ITFG1 antisense RNA 1, HGNC:51383) is a long non-coding RNA gene on chromosome 16q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51383
Approved symbol	ITFG1-AS1
Name	ITFG1 antisense RNA 1
Location	16q12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260281
Ensembl biotype	lncRNA
Entrez	101927102
RNAcentral	URS000075C84C — lncRNA, 881 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000564705, ENST00000565694, ENST00000722879

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000564705 — 4 exons

Exon	Start	End
ENSE00002577731	47161549	47161590
ENSE00002591081	47157555	47157604
ENSE00002599352	47144323	47144494
ENSE00002629235	47162551	47162749

Expression profiles

Bgee: expression breadth ubiquitous, 126 present calls, max score 96.33.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2573 / max 112.3202, expressed in 65 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
153933	0.1959	45
153932	0.0325	8
153934	0.0289	9

Top tissues by expression

126 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	96.33	gold quality
right testis	UBERON:0004534	96.09	gold quality
testis	UBERON:0000473	95.94	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.43	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.60	gold quality
bone marrow cell	CL:0002092	78.01	gold quality
cortical plate	UBERON:0005343	72.47	gold quality
ganglionic eminence	UBERON:0004023	69.91	gold quality
ventricular zone	UBERON:0003053	68.80	gold quality
nucleus accumbens	UBERON:0001882	66.57	gold quality
bone marrow	UBERON:0002371	65.52	gold quality
hindlimb stylopod muscle	UBERON:0004252	64.69	gold quality
endometrium	UBERON:0001295	64.31	gold quality
prefrontal cortex	UBERON:0000451	64.26	gold quality
amygdala	UBERON:0001876	63.51	gold quality
frontal cortex	UBERON:0001870	62.49	gold quality
putamen	UBERON:0001874	62.43	gold quality
gall bladder	UBERON:0002110	62.24	gold quality
tibial nerve	UBERON:0001323	62.06	gold quality
caudate nucleus	UBERON:0001873	61.93	gold quality
cerebral cortex	UBERON:0000956	61.57	gold quality
lymph node	UBERON:0000029	61.55	gold quality
Brodmann (1909) area 9	UBERON:0013540	61.43	gold quality
skeletal muscle tissue	UBERON:0001134	61.34	gold quality
anterior cingulate cortex	UBERON:0009835	61.29	gold quality
monocyte	CL:0000576	61.22	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	61.14	gold quality
right frontal lobe	UBERON:0002810	60.93	gold quality
Ammon’s horn	UBERON:0001954	60.49	gold quality
brain	UBERON:0000955	60.45	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.23

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.