ITGAE-AS1

Summary

ITGAE-AS1 (ITGAE antisense RNA 1, HGNC:59081) is a long non-coding RNA gene on chromosome 17p13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:59081
Approved symbol	ITGAE-AS1
Name	ITGAE antisense RNA 1
Location	17p13.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC116914.2
Ensembl gene	ENSG00000262692
Ensembl biotype	lncRNA
Entrez	144717122

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000571741

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000571741 — 2 exons

Exon	Start	End
ENSE00002658214	3722389	3722488
ENSE00002673730	3721628	3721818

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 84.31.

Top tissues by expression

131 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.31	gold quality
endometrium	UBERON:0001295	82.80	gold quality
ganglionic eminence	UBERON:0004023	79.67	gold quality
granulocyte	CL:0000094	79.09	gold quality
monocyte	CL:0000576	76.29	gold quality
leukocyte	CL:0000738	75.69	gold quality
cortical plate	UBERON:0005343	75.36	gold quality
bone marrow cell	CL:0002092	74.85	gold quality
lower esophagus mucosa	UBERON:0035834	74.46	gold quality
spleen	UBERON:0002106	74.36	gold quality
mucosa of transverse colon	UBERON:0004991	74.06	gold quality
lymph node	UBERON:0000029	73.63	gold quality
duodenum	UBERON:0002114	73.40	gold quality
right adrenal gland cortex	UBERON:0035827	72.87	gold quality
stromal cell of endometrium	CL:0002255	72.85	gold quality
ventricular zone	UBERON:0003053	72.68	gold quality
right uterine tube	UBERON:0001302	71.49	gold quality
blood	UBERON:0000178	71.35	gold quality
right adrenal gland	UBERON:0001233	71.22	gold quality
small intestine Peyer’s patch	UBERON:0003454	71.09	gold quality
small intestine	UBERON:0002108	70.99	gold quality
left adrenal gland	UBERON:0001234	70.63	gold quality
left adrenal gland cortex	UBERON:0035825	70.61	gold quality
cortex of kidney	UBERON:0001225	70.58	gold quality
adrenal gland	UBERON:0002369	70.44	gold quality
muscle tissue	UBERON:0002385	70.24	gold quality
tonsil	UBERON:0002372	70.23	gold quality
colonic epithelium	UBERON:0000397	70.21	gold quality
myometrium	UBERON:0001296	69.94	gold quality
skeletal muscle tissue	UBERON:0001134	69.93	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.14

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.