ITPKB-AS1

Summary

ITPKB-AS1 (ITPKB antisense RNA 1, HGNC:40312) is a long non-coding RNA gene on chromosome 1q42.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40312
Approved symbol	ITPKB-AS1
Name	ITPKB antisense RNA 1
Location	1q42.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000228548
Ensembl biotype	lncRNA
Entrez	100873994
RNAcentral	URS00002FF0BC — lncRNA, 538 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000453525

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000453525 — 2 exons

Exon	Start	End
ENSE00001666073	226668897	226669202
ENSE00001710464	226676114	226676345

Expression profiles

Bgee: expression breadth ubiquitous, 102 present calls, max score 82.93.

Top tissues by expression

102 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.93	silver quality
corpus callosum	UBERON:0002336	77.81	gold quality
bone marrow cell	CL:0002092	70.71	silver quality
urinary bladder	UBERON:0001255	65.02	gold quality
hindlimb stylopod muscle	UBERON:0004252	63.83	gold quality
tonsil	UBERON:0002372	62.60	silver quality
lymph node	UBERON:0000029	61.51	gold quality
calcaneal tendon	UBERON:0003701	61.49	gold quality
bone marrow	UBERON:0002371	61.30	silver quality
blood	UBERON:0000178	60.42	gold quality
sural nerve	UBERON:0015488	57.58	silver quality
fundus of stomach	UBERON:0001160	57.56	gold quality
gall bladder	UBERON:0002110	56.83	gold quality
monocyte	CL:0000576	56.29	gold quality
leukocyte	CL:0000738	56.22	gold quality
placenta	UBERON:0001987	56.13	gold quality
duodenum	UBERON:0002114	55.06	gold quality
primary visual cortex	UBERON:0002436	54.79	gold quality
liver	UBERON:0002107	54.62	gold quality
lung	UBERON:0002048	53.69	gold quality
muscle of leg	UBERON:0001383	52.60	gold quality
adult mammalian kidney	UBERON:0000082	51.92	gold quality
pancreas	UBERON:0001264	51.41	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	51.39	gold quality
kidney	UBERON:0002113	51.17	gold quality
endometrium	UBERON:0001295	50.53	silver quality
granulocyte	CL:0000094	50.42	silver quality
stomach	UBERON:0000945	49.56	gold quality
adrenal tissue	UBERON:0018303	49.23	gold quality
gastrocnemius	UBERON:0001388	49.01	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.38

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.