ITPKB
gene geneOn this page
Also known as IP3KBIP3-3KB
Summary
ITPKB (inositol-trisphosphate 3-kinase B, HGNC:6179) is a protein-coding gene on chromosome 1q42.12, encoding Inositol-trisphosphate 3-kinase B (P27987). Catalyzes the phosphorylation of 1D-myo-inositol 1,4,5-trisphosphate (InsP3) into 1D-myo-inositol 1,3,4,5-tetrakisphosphate and participates to the regulation of calcium homeostasis.
The protein encoded by this protein regulates inositol phosphate metabolism by phosphorylation of second messenger inositol 1,4,5-trisphosphate to Ins(1,3,4,5)P4. The activity of this encoded protein is responsible for regulating the levels of a large number of inositol polyphosphates that are important in cellular signaling. Both calcium/calmodulin and protein phosphorylation mechanisms control its activity.
Source: NCBI Gene 3707 — RefSeq curated summary.
At a glance
- Gene–disease (curated): ITPKB deficiency (Limited, ClinGen) — +2 more curated relationships
- GWAS associations: 13
- Clinical variants (ClinVar): 159 total
- Expression (HPA): Tissue enhanced — highest in area postrema, posterior thalamic nucleus, globus pallidus, externus
- GTEx eGene: eQTL in 15 tissues, sQTL in 3 (q < 0.05)
- Constraint (gnomAD): pLI 1.00 (loss-of-function intolerant), LOEUF 0.34 (highly constrained)
- MANE Select transcript:
NM_002221 - Notable: 159 clinical variants but no curated precision-oncology (CIViC) evidence yet
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6179 |
| Approved symbol | ITPKB |
| Name | inositol-trisphosphate 3-kinase B |
| Location | 1q42.12 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | IP3KB, IP3-3KB |
| Ensembl gene | ENSG00000143772 |
| Ensembl biotype | protein_coding |
| OMIM | 147522 |
| Entrez | 3707 |
Gene structure
Transcript identifiers
Ensembl transcripts: 7 — 7 protein_coding
MANE Select: ENST00000429204
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 2, TSL 5: 1
ENST00000429204, ENST00000272117, ENST00000366784, ENST00000926664, ENST00001112273, ENST00001112274, ENST00001145801
RefSeq mRNA: 2 — MANE Select: NM_002221
NM_001388404, NM_002221
CCDS: CCDS1555, CCDS91167
Canonical transcript exons
ENST00000429204 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000961885 | 226648672 | 226648771 |
| ENSE00000961886 | 226647167 | 226647380 |
| ENSE00000961887 | 226641921 | 226642125 |
| ENSE00000961888 | 226639557 | 226639658 |
| ENSE00000961889 | 226637679 | 226637750 |
| ENSE00001145367 | 226631690 | 226634886 |
| ENSE00001442611 | 226735527 | 226737663 |
| ENSE00001658024 | 226739041 | 226739282 |
Expression profiles
Bgee: expression breadth ubiquitous, 268 present calls, max score 99.09.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 33.3494 / max 846.7999, expressed in 1678 samples.
Highest expression (Bgee): lateral globus pallidus, substantia nigra pars reticulata, globus pallidus, dorsal motor nucleus of vagus nerve, medial globus pallidus.
Genetic regulation across tissues (GTEx eQTL / sQTL)
ITPKB is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 15 tissues and its splicing (sQTL) in 3 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
18 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Whole Blood | eqtl | 2.1e-07 | -0.10 | 1:226739756:G:A |
| Muscle Skeletal | sqtl | 2.4e-05 | +0.75 | 1:226044737:C:T |
| Skin Sun Exposed Lower leg | eqtl | 6.1e-05 | -0.21 | 1:226632551:C:G |
| Skin Not Sun Exposed Suprapubic | eqtl | 1.4e-04 | -0.21 | 1:226638745:G:A |
| Colon Sigmoid | eqtl | 1.9e-03 | -0.22 | 1:226667855:C:T |
| Nerve Tibial | eqtl | 3.9e-03 | +0.11 | 1:226658690:C:A |
| Lung | eqtl | 4.3e-03 | -0.13 | 1:226744910:A:G |
| Artery Aorta | eqtl | 6.4e-03 | +0.17 | 1:226787569:A:G |
| Adrenal Gland | eqtl | 8.3e-03 | -1.21 | 1:226788031:A:C |
| Brain Nucleus accumbens basal ganglia | eqtl | 1.4e-02 | -0.45 | 1:227738515:C:T |
| Artery Tibial | eqtl | 1.6e-02 | +0.30 | 1:227430547:G:A |
| Brain Frontal Cortex BA9 | eqtl | 2.6e-02 | +0.35 | 1:227702338:C:T |
| Cells Cultured fibroblasts | eqtl | 3.1e-02 | -0.39 | 1:226890808:T:G |
| Muscle Skeletal | eqtl | 3.2e-02 | +0.23 | 1:227301521:A:G |
| Pancreas | sqtl | 3.6e-02 | -1.66 | 1:227518345:G:C |
| Heart Left Ventricle | eqtl | 3.7e-02 | -0.12 | 1:225743354:G:A |
| Esophagus Mucosa | sqtl | 3.9e-02 | +1.09 | 1:226538365:G:A |
| Stomach | eqtl | 4.4e-02 | -0.14 | 1:226695585:G:A |
FANTOM5 promoters
8 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 17781 | 29.2221 | 1615 |
| 17782 | 3.2281 | 1209 |
| 17777 | 0.2833 | 112 |
| 17778 | 0.2500 | 73 |
| 17780 | 0.2187 | 107 |
| 17775 | 0.0538 | 34 |
| 17779 | 0.0521 | 34 |
| 17776 | 0.0413 | 23 |
Top tissues by expression
showing 100 of 291 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| lateral globus pallidus | UBERON:0002476 | 99.09 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 98.06 | gold quality |
| globus pallidus | UBERON:0001875 | 97.70 | gold quality |
| dorsal motor nucleus of vagus nerve | UBERON:0002870 | 97.60 | gold quality |
| medial globus pallidus | UBERON:0002477 | 97.42 | gold quality |
| inferior olivary complex | UBERON:0002127 | 97.38 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 97.34 | gold quality |
| subthalamic nucleus | UBERON:0001906 | 97.24 | gold quality |
| ventral tegmental area | UBERON:0002691 | 97.07 | gold quality |
| medulla oblongata | UBERON:0001896 | 97.01 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 96.95 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 96.84 | gold quality |
| inferior vagus X ganglion | UBERON:0005363 | 96.78 | gold quality |
| midbrain | UBERON:0001891 | 96.51 | gold quality |
| substantia nigra | UBERON:0002038 | 96.48 | gold quality |
| dorsal plus ventral thalamus | UBERON:0001897 | 96.29 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 95.73 | gold quality |
| cranial nerve II | UBERON:0000941 | 95.71 | gold quality |
| spinal cord | UBERON:0002240 | 95.17 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 95.13 | gold quality |
| amygdala | UBERON:0001876 | 94.90 | gold quality |
| pons | UBERON:0000988 | 94.49 | gold quality |
| putamen | UBERON:0001874 | 94.30 | gold quality |
| hypothalamus | UBERON:0001898 | 94.27 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 93.60 | gold quality |
| caudate nucleus | UBERON:0001873 | 93.59 | gold quality |
| lower esophagus | UBERON:0013473 | 93.56 | gold quality |
| CA1 field of hippocampus | UBERON:0003881 | 93.46 | gold quality |
| thymus | UBERON:0002370 | 93.21 | gold quality |
| temporal lobe | UBERON:0001871 | 92.98 | gold quality |
| nucleus accumbens | UBERON:0001882 | 92.98 | gold quality |
| sural nerve | UBERON:0015488 | 92.88 | gold quality |
| Ammon’s horn | UBERON:0001954 | 92.67 | gold quality |
| body of uterus | UBERON:0009853 | 92.63 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 92.18 | gold quality |
| corpus callosum | UBERON:0002336 | 92.01 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 91.53 | gold quality |
| olfactory bulb | UBERON:0002264 | 91.51 | gold quality |
| myometrium | UBERON:0001296 | 91.47 | gold quality |
| postcentral gyrus | UBERON:0002581 | 91.44 | gold quality |
| parietal lobe | UBERON:0001872 | 91.20 | gold quality |
| left uterine tube | UBERON:0001303 | 91.11 | gold quality |
| paraflocculus | UBERON:0005351 | 91.08 | gold quality |
| entorhinal cortex | UBERON:0002728 | 91.04 | gold quality |
| right frontal lobe | UBERON:0002810 | 90.71 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 90.16 | gold quality |
| telencephalon | UBERON:0001893 | 90.11 | gold quality |
| mucosa of stomach | UBERON:0001199 | 90.09 | gold quality |
| trigeminal ganglion | UBERON:0001675 | 90.00 | gold quality |
| cingulate cortex | UBERON:0003027 | 89.95 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 89.94 | gold quality |
| apex of heart | UBERON:0002098 | 89.94 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 89.90 | gold quality |
| pigmented layer of retina | UBERON:0001782 | 89.79 | gold quality |
| retina | UBERON:0000966 | 89.77 | gold quality |
| blood | UBERON:0000178 | 89.69 | gold quality |
| granulocyte | CL:0000094 | 89.65 | gold quality |
| lymph node | UBERON:0000029 | 88.94 | gold quality |
| endocervix | UBERON:0000458 | 88.90 | gold quality |
| forebrain | UBERON:0001890 | 88.87 | gold quality |
| central nervous system | UBERON:0001017 | 88.68 | gold quality |
| colonic epithelium | UBERON:0000397 | 88.61 | gold quality |
| parotid gland | UBERON:0001831 | 88.48 | gold quality |
| brain | UBERON:0000955 | 88.47 | gold quality |
| corpus epididymis | UBERON:0004359 | 88.43 | gold quality |
| cerebral cortex | UBERON:0000956 | 88.25 | gold quality |
| choroid plexus epithelium | UBERON:0003911 | 88.15 | gold quality |
| lower lobe of lung | UBERON:0008949 | 88.07 | gold quality |
| frontal cortex | UBERON:0001870 | 88.01 | gold quality |
| frontal lobe | UBERON:0016525 | 88.00 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 87.85 | gold quality |
| neocortex | UBERON:0001950 | 87.74 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 87.66 | gold quality |
| ectocervix | UBERON:0012249 | 87.41 | gold quality |
| peripheral nervous system | UBERON:0000010 | 87.03 | gold quality |
| tibial nerve | UBERON:0001323 | 87.03 | gold quality |
| cauda epididymis | UBERON:0004360 | 86.92 | gold quality |
| prefrontal cortex | UBERON:0000451 | 86.49 | gold quality |
| esophagus | UBERON:0001043 | 86.41 | gold quality |
| sigmoid colon | UBERON:0001159 | 86.28 | gold quality |
| right lung | UBERON:0002167 | 86.14 | gold quality |
| urinary bladder | UBERON:0001255 | 86.12 | gold quality |
| adult organism | UBERON:0007023 | 86.00 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 85.95 | gold quality |
| fundus of stomach | UBERON:0001160 | 85.94 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 85.83 | gold quality |
| omental fat pad | UBERON:0010414 | 85.83 | gold quality |
| peritoneum | UBERON:0002358 | 85.81 | gold quality |
| occipital lobe | UBERON:0002021 | 85.76 | gold quality |
| spleen | UBERON:0002106 | 85.59 | gold quality |
| decidua | UBERON:0002450 | 85.55 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 85.52 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 85.29 | gold quality |
| vermiform appendix | UBERON:0001154 | 85.10 | gold quality |
| upper arm skin | UBERON:0004263 | 84.97 | gold quality |
| adipose tissue | UBERON:0001013 | 84.92 | gold quality |
| skin of leg | UBERON:0001511 | 84.86 | gold quality |
| dorsal root ganglion | UBERON:0000044 | 84.81 | gold quality |
| prostate gland | UBERON:0002367 | 84.72 | gold quality |
| connective tissue | UBERON:0002384 | 84.66 | gold quality |
Single-cell (SCXA)
Detected in 6 experiment(s), a significant marker in 5.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-81383 | yes | 256.42 |
| E-CURD-119 | yes | 49.78 |
| E-HCAD-35 | yes | 23.35 |
| E-HCAD-25 | yes | 21.66 |
| E-ANND-3 | yes | 8.30 |
| E-MTAB-6058 | no | 14.64 |
HPA expression
RNA tissue specificity: Tissue enhanced
showing 60 of 76 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Choroid plexus | tissue | 197.2 | |
| Hippocampus | tissue | 164.0 | medium |
| Locus coeruleus | tissue | 158.3 | |
| Nucleus accumbens | tissue | 136.5 | |
| Postcentral gyrus | tissue | 109.7 | |
| Spinal cord | tissue | 67.2 | |
| Periaqueductal gray | tissue | 60.3 | |
| Midbrain | tissue | 59.5 | |
| Medulla oblongata | tissue | 59.3 | |
| Substantia nigra | tissue | 51.0 | |
| Pons | tissue | 49.6 | |
| Thalamus | tissue | 48.3 | |
| Superior colliculi | tissue | 45.4 | |
| Hypothalamus | tissue | 41.1 | |
| Hippocampal formation | tissue | 31.8 | |
| Corpus callosum | tissue | 29.4 | |
| Thymus | tissue | 28.7 | |
| Amygdala | tissue | 28.2 | |
| Smooth muscle | tissue | 27.8 | medium |
| Endometrium 1 | tissue | 27.2 | not detected |
| Salivary gland | tissue | 26.4 | not detected |
| Septum | tissue | 26.2 | |
| Adipose tissue | tissue | 25.6 | low |
| Lymph node | tissue | 25.5 | not detected |
| Ventral forebrain | tissue | 22.2 | |
| Cerebellum | tissue | 21.4 | not detected |
| Basal ganglia | tissue | 21.1 | medium |
| Spleen | tissue | 20.4 | not detected |
| Seminal vesicle | tissue | 20.2 | not detected |
| Cerebral cortex | tissue | 20.1 | medium |
| Motor cortex | tissue | 20.1 | |
| Temporal cortex | tissue | 19.6 | |
| Insular cortex | tissue | 19.4 | |
| Putamen | tissue | 19.1 | |
| Entorhinal cortex | tissue | 18.7 | |
| Prefrontal cortex | tissue | 18.0 | |
| Tonsil | tissue | 18.0 | not detected |
| Retrosplenial cortex | tissue | 18.0 | |
| Retrosplenial and cingulate cortex | tissue | 17.6 | |
| Bone marrow | tissue | 17.1 | |
| Somatosensory cortex | tissue | 17.1 | |
| Occipital cortex | tissue | 16.2 | |
| Epididymis | tissue | 15.5 | not detected |
| Olfactory bulb | tissue | 15.5 | |
| Fallopian tube | tissue | 14.5 | not detected |
| Placenta | tissue | 13.9 | not detected |
| Appendix | tissue | 13.7 | not detected |
| Vagina | tissue | 13.5 | not detected |
| Lung | tissue | 13.5 | medium |
| Cervix | tissue | 13.4 | not detected |
| Prostate | tissue | 12.6 | not detected |
| Esophagus | tissue | 12.5 | not detected |
| Urinary bladder | tissue | 12.0 | not detected |
| Skin 1 | tissue | 10.9 | not detected |
| Skeletal muscle | tissue | 10.7 | not detected |
| Tongue | tissue | 10.7 | |
| Gallbladder | tissue | 9.0 | |
| Kidney | tissue | 8.9 | not detected |
| Caudate putamen | tissue | 8.8 | |
| Frontal cortex | tissue | 8.7 |
Brain sub-regions (HPA Brain Atlas): detected in 190; highest nTPM — Area postrema (378.8), Posterior thalamic nucleus (372.9), Globus pallidus, externus (356.0), Inferior olive (330.4), Nucleus rhomboideus (324.8).
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
Targeting ITPKB by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 138 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-1252-5P | 100.00 | 69.80 | 2774 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-4789-5P | 99.98 | 70.76 | 2721 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-4267 | 99.96 | 66.53 | 2368 |
| HSA-MIR-6721-5P | 99.93 | 68.92 | 2981 |
| HSA-MIR-515-5P | 99.92 | 69.82 | 2343 |
| HSA-MIR-519E-5P | 99.92 | 69.62 | 2358 |
| HSA-MIR-6809-3P | 99.91 | 71.45 | 3814 |
| HSA-MIR-652-5P | 99.91 | 67.49 | 505 |
| HSA-MIR-454-3P | 99.91 | 74.01 | 1925 |
| HSA-MIR-106A-5P | 99.90 | 73.94 | 2683 |
| HSA-MIR-4753-3P | 99.90 | 71.03 | 3786 |
| HSA-MIR-130A-3P | 99.90 | 73.31 | 1861 |
| HSA-MIR-130B-3P | 99.90 | 73.27 | 1850 |
| HSA-MIR-301A-3P | 99.90 | 73.15 | 1839 |
| HSA-MIR-301B-3P | 99.90 | 73.19 | 1836 |
| HSA-MIR-3666 | 99.90 | 73.24 | 1833 |
| HSA-MIR-4295 | 99.90 | 73.11 | 1838 |
| HSA-MIR-17-5P | 99.89 | 73.83 | 2665 |
| HSA-MIR-124-3P | 99.89 | 73.74 | 3043 |
| HSA-MIR-506-3P | 99.89 | 73.55 | 3057 |
| HSA-MIR-106B-5P | 99.88 | 74.72 | 2795 |
| HSA-MIR-20A-5P | 99.88 | 74.76 | 2769 |
| HSA-MIR-20B-5P | 99.88 | 74.01 | 2621 |
| HSA-MIR-519D-3P | 99.88 | 73.97 | 2607 |
| HSA-MIR-526B-3P | 99.88 | 74.06 | 2587 |
| HSA-MIR-93-5P | 99.88 | 73.98 | 2606 |
Functional genomics
gnomAD constraint: pLI 1, LOEUF 0.34, missense Z -0.124 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD)
ENST00000429204 splits into 2 regions with different missense tolerance; 0 are missense-constrained. Missense variants in a constrained region (low observed/expected) are more likely to be pathogenic. gnomAD
| Region (GRCh38) | Missense obs / exp | o/e | Constrained |
|---|---|---|---|
| 1:226,634,674–226,735,528 | 248 / 396.7 | 0.63 | no |
| 1:226,735,529–226,737,458 | 992 / 853.8 | 1.16 | no |
Literature-anchored findings (GeneRIF, showing 15)
- results highlight the potential role of the three isoforms of InsP3 3-kinase as direct InsP3 metabolizing enzymes and direct regulators of Ca2+ responses to extracellular signals (PMID:12747803)
- We aim to summarize the existing information about functionally uncoupled IP(3)R and RyR channels, and to discuss the concept that those channels can participate in Ca(2+)-leak pathways. (PMID:16354157)
- In each of the three isoforms a nuclear export signal has evolved in the catalytic domain either de novo (IP3K-A) or as a substitute for an earlier evolved corresponding N-terminal signal (IP3K-B and IP3K-C). (PMID:16740130)
- IP3KB not only regulates cytoplasmic Ca(2+) signals by phosphorylation of subplasmalemmal and cytoplasmic Ins(1,4,5)P(3) but may also be involved in modulating nuclear Ca(2+) signals generated from these nuclear envelope invaginations. (PMID:21148483)
- a specific increase in inositol 1,4,5-trisphosphate 3-kinase A and B (ITPKA and ITPKB) was observed upon hESCs spontaneous differentiation. (PMID:22446005)
- ITPKB is increased in Alzheimer’s brain three-fold in the cerebral cortex of most patients with Alzheimer’s disease compared with control subjects and accumulates in dystrophic neurites associated with amyloid plaques. (PMID:24401760)
- The authors confirm downregulation of miR-132 and upregulation of ITPKB in three distinct human Alzheimer’s disease patient cohorts. (PMID:27485122)
- miR-140-5p regulates this context-specific autophagy through its target, inositol 1,4,5-trisphosphate kinase 2 (IP3k2). Therefore, the results of the present study demonstrated that miR-140-5p mediated drug-resistance in osteosarcoma cells by inducing autophagy. (PMID:27582507)
- ITPKB does not affect the cellular actin structure and does not suppress dissemination of human lung cancer cells in mice. (PMID:29871874)
- study also suggests a distinctive signaling function of IP4 that regulates NOX4. Furthermore, pharmaceutical inhibition of ITPKB displayed synergistic attenuation of tumor growth with cisplatin, suggesting ITPKB as a promising synthetic lethal target for cancer therapeutic intervention to overcome cisplatin resistance. (PMID:31081803)
- Severe combined immunodeficiency caused by inositol-trisphosphate 3-kinase B (ITPKB) deficiency. (PMID:31987846)
- Association of ITPKB, IL1R2 and COQ7 with Parkinson’s disease in Taiwan. (PMID:34244037)
- Increased Levels of the Parkinson’s Disease-Associated Gene ITPKB Correlate with Higher Expression Levels of alpha-Synuclein, Independent of Mutation Status. (PMID:36768321)
- Genome-Wide Meta-Analysis Identifies Multiple Novel Rare Variants to Predict Common Human Infectious Diseases Risk. (PMID:37108169)
- Suppression of ITPKB degradation by Trim25 confers TMZ resistance in glioblastoma through ROS homeostasis. (PMID:38438346)
Cross-species orthologs
7 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | itpkb | ENSDARG00000010059 |
| mus_musculus | Itpkb | ENSMUSG00000038855 |
| rattus_norvegicus | Itpkb | ENSRNOG00000002969 |
| drosophila_melanogaster | IP3K1 | FBGN0032147 |
| drosophila_melanogaster | Ip6k | FBGN0034644 |
| caenorhabditis_elegans | lfe-2 | WBGENE00002979 |
| caenorhabditis_elegans | F30A10.3 | WBGENE00009262 |
Paralogs (6): IP6K2 (ENSG00000068745), ITPKC (ENSG00000086544), ITPKA (ENSG00000137825), IPMK (ENSG00000151151), IP6K3 (ENSG00000161896), IP6K1 (ENSG00000176095)
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:109235) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 21 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| arrested T cell differentiation | 2 |
| sparse hair | 1 |
| absent CD8-positive, alpha-beta T cells | 1 |
| distended abdomen | 1 |
| decreased locomotor activity | 1 |
| postnatal growth retardation | 1 |
| decreased IgG level | 1 |
| abnormal thymus involution | 1 |
| premature death | 1 |
| abnormal T cell physiology | 1 |
| absent CD4-positive, alpha-beta T cells | 1 |
| abnormal thymocyte activation | 1 |
| increased susceptibility to parasitic infection | 1 |
| diarrhea | 1 |
| increased double-positive T cell number | 1 |
| absent T cells | 1 |
| decreased IgG1 level | 1 |
| decreased IgG2a level | 1 |
| decreased IgG2b level | 1 |
| distended stomach | 1 |
| absent thymus medulla | 1 |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| ITPKB-IT1 | ncRNA | 100506443 |
| STUM | protein-coding | 375057 |
| PSEN2 | protein-coding | 5664 |
Protein
Protein identifiers
Inositol-trisphosphate 3-kinase B — P27987 (reviewed: P27987)
Alternative names: Inositol 1,4,5-trisphosphate 3-kinase B
All UniProt accessions (1): P27987
UniProt curated annotations — full annotation on UniProt →
Function. Catalyzes the phosphorylation of 1D-myo-inositol 1,4,5-trisphosphate (InsP3) into 1D-myo-inositol 1,3,4,5-tetrakisphosphate and participates to the regulation of calcium homeostasis.
Subunit / interactions. Interacts with DMTN.
Subcellular location. Cytoplasm. Cytoskeleton. Endoplasmic reticulum.
Activity regulation. IP3K is activated by calcium and calmodulin. Form B is much more sensitive to calcium/calmodulin than form A.
Similarity. Belongs to the inositol phosphokinase (IPK) family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P27987-1 | 1 | yes |
| P27987-2 | 2 |
RefSeq proteins (2): NP_001375333, NP_002212* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR005522 | IPK | Family |
| IPR038286 | IPK_sf | Homologous_superfamily |
Pfam: PF03770
Enzyme classification (BRENDA)
- EC 2.7.1.127 — inositol-trisphosphate 3-kinase (BRENDA: 14 organisms, 87 substrates, 104 inhibitors, 42 Km, 0 kcat entries)
Substrate kinetics (BRENDA)
4 substrates with measured Km, best-characterized 4. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| 1D-MYO-INOSITOL 1,4,5-TRISPHOSPHATE | 0.0002–0.011 | 21 |
| ATP | 0.033–2.5 | 13 |
| 1D-MYO-INOSITOL 2,4,5-TRISPHOSPHATE | 0.0015–0.005 | 2 |
| INSP3 | 0.0002–0.0017 | 2 |
Catalyzed reactions (Rhea)
- 1D-myo-inositol 1,4,5-trisphosphate + ATP = 1D-myo-inositol 1,3,4,5-tetrakisphosphate + ADP + H(+) (RHEA:11020)
UniProt features (36 total): binding site 10, region of interest 6, compositionally biased region 5, modified residue 5, sequence conflict 4, sequence variant 3, chain 1, splice variant 1, mutagenesis site 1
Structure
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P27987-F1 | 56.58 | 0.25 |
Human Protein Atlas
Protein class: Enzymes, ENZYME proteins, Transferases, Metabolic proteins, Predicted intracellular proteins, Cancer-related genes, Mutated cancer genes
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): nucleoplasm
Antibody reliability (HPA): IH enhanced · IF approved
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (10)
| Position | Role |
|---|---|
| 679 | ATP |
| 690 | ATP |
| 730–732 | ATP |
| 743 | ATP |
| 745 | substrate |
| 766 | substrate |
| 793–800 | substrate |
| 817 | ATP |
| 897 | ATP |
| 900 | substrate |
Post-translational modifications (5)
| Type | Positions |
|---|---|
| Phosphoserine | 43, 49, 71, 204, 269 |
Mutagenesis-validated functional residues (1)
| Position | Phenotype |
|---|---|
| 897 | loss of kinase activity. |
Function
Pathways and Gene Ontology
Reactome pathways
1 curated (TAS) of 3; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
3 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-1855204 | Synthesis of IP3 and IP4 in the cytosol | curated |
| R-HSA-1483249 | Inositol phosphate metabolism | — |
| R-HSA-1430728 | Metabolism | — |
MSigDB gene sets: 359 (showing top):
GOBP_MYELOID_CELL_DIFFERENTIATION, GOBP_REGULATION_OF_CELL_ACTIVATION, RNGTGGGC_UNKNOWN, GOBP_PHOSPHOLIPID_METABOLIC_PROCESS, GOBP_PHOSPHATIDYLINOSITOL_METABOLIC_PROCESS, HNF3ALPHA_Q6, GOBP_REGULATION_OF_ALPHA_BETA_T_CELL_ACTIVATION, GOBP_POSITIVE_REGULATION_OF_HEMOPOIESIS, GOBP_MYELOID_CELL_HOMEOSTASIS, GOBP_REGULATION_OF_LEUKOCYTE_APOPTOTIC_PROCESS, GOBP_THYMIC_T_CELL_SELECTION, CMYB_01, GOBP_INOSITOL_PHOSPHATE_METABOLIC_PROCESS, GOBP_ALPHA_BETA_T_CELL_DIFFERENTIATION, GOBP_POLYOL_METABOLIC_PROCESS
GO Biological Process (5): signal transduction (GO:0007165), inositol trisphosphate metabolic process (GO:0032957), inositol phosphate biosynthetic process (GO:0032958), phosphatidylinositol phosphate biosynthetic process (GO:0046854), cellular response to calcium ion (GO:0071277)
GO Molecular Function (8): inositol hexakisphosphate kinase activity (GO:0000828), calmodulin binding (GO:0005516), ATP binding (GO:0005524), inositol-1,4,5-trisphosphate 3-kinase activity (GO:0008440), nucleotide binding (GO:0000166), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (6): nucleus (GO:0005634), cytoplasm (GO:0005737), endoplasmic reticulum (GO:0005783), cytosol (GO:0005829), cytoskeleton (GO:0005856), membrane (GO:0016020)
Reactome top-level categories
2 top-level categories:
| Category | Pathways |
|---|---|
| Inositol phosphate metabolism | 1 |
| Metabolism | 1 |
GO top-level categories
29 GO namespaces:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| inositol phosphate metabolic process | 2 |
| intracellular membrane-bounded organelle | 2 |
| cytoplasm | 2 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| polyol biosynthetic process | 1 |
| organophosphate biosynthetic process | 1 |
| glycerophospholipid biosynthetic process | 1 |
| response to calcium ion | 1 |
| cellular response to metal ion | 1 |
| phosphotransferase activity, phosphate group as acceptor | 1 |
| inositol phosphate kinase activity | 1 |
| protein binding | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| anion binding | 1 |
| inositol trisphosphate kinase activity | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| catalytic activity | 1 |
| intracellular anatomical structure | 1 |
| endomembrane system | 1 |
| intracellular membraneless organelle | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 7 of 19 annotations. The rest are phylogenetic / computational / electronic (IEA).
7 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| cellular response to calcium ion | BP | direct assay |
| inositol trisphosphate metabolic process | BP | direct assay |
| phosphatidylinositol phosphate biosynthetic process | BP | direct assay |
| cytoplasm | CC | direct assay |
| cytoskeleton | CC | direct assay |
| endoplasmic reticulum | CC | direct assay |
| inositol-1,4,5-trisphosphate 3-kinase activity | MF | direct assay |
Protein interactions and networks
STRING
showing 16 of 710 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ITPKB | IP6K1 | Q92551 | 771 |
| ITPKB | IP6K3 | Q96PC2 | 743 |
| ITPKB | IP6K2 | Q9UHH9 | 663 |
| ITPKB | AKT1 | P31749 | 536 |
| ITPKB | PLCG1 | P19174 | 513 |
| ITPKB | GNA13 | Q14344 | 493 |
| ITPKB | IPMK | Q8NFU5 | 490 |
| ITPKB | INPP5A | Q14642 | 487 |
| ITPKB | LCP2 | Q13094 | 477 |
| ITPKB | ZAP70 | P43403 | 456 |
| ITPKB | MFHAS1 | Q9Y4C4 | 442 |
| ITPKB | CALM1 | P02593 | 429 |
| ITPKB | PIK3C3 | Q8NEB9 | 428 |
| ITPKB | CALML6 | Q8TD86 | 416 |
| ITPKB | CALML5 | Q9NZT1 | 416 |
| ITPKB | CALML4 | Q96GE6 | 416 |
IntAct
Human interaction partners of ITPKB in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
18 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| GOLGA2 | physical association | 0.670 | 4 |
| BRAF | physical association | 0.600 | 3 |
| CTDSP1 | physical association | 0.560 | 5 |
| UBQLN2 | physical association | 0.560 | 5 |
| CEP70 | physical association | 0.560 | 3 |
| IFT88 | physical association | 0.560 | 3 |
| KRT34 | physical association | 0.560 | 3 |
| PPP3CA | physical association | 0.560 | 3 |
| SCAI | physical association | 0.560 | 3 |
| TRIM54 | physical association | 0.560 | 3 |
| PSME3 | physical association | 0.370 | 1 |
| SMAD4 | proximity | 0.270 | 4 |
| SPOP | proximity | 0.270 | 4 |
| AKT1 | proximity | 0.270 | 1 |
| EGFR | proximity | 0.270 | 1 |
| PTEN | proximity | 0.270 | 1 |
| PTPN11 | proximity | 0.270 | 1 |
| TP53 | proximity | 0.270 | 1 |
BioGRID (29 interactions; top human partners by supporting records): GOLGA2 (Two-hybrid; 2 records), ADNP2 (Affinity Capture-MS), AKT1 (Biochemical Activity), CEP70 (Two-hybrid), CTDSP1 (Two-hybrid), DDX39A (Affinity Capture-RNA), ELAVL1 (Affinity Capture-RNA), ESF1 (Affinity Capture-MS), ESR2 (Affinity Capture-MS), HNRNPL (Affinity Capture-RNA), IFT88 (Two-hybrid), KIAA1429 (Affinity Capture-RNA), KRT34 (Two-hybrid), NR3C1 (Proximity Label-MS), NUDT21 (Affinity Capture-RNA)
SIGNOR signaling
2 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| PRKCA | “down-regulates activity” | ITPKB | |
| PRKACA | “down-regulates activity” | ITPKB | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 18 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| positive regulation of gene expression | 5 | 10.8× | 5e-03 |
Disease & clinical
Genetic variants
Variant evidence for ITPKB: 159 ClinVar records (0 pathogenic / likely pathogenic); 13 GWAS associations.
ClinVar
159 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 116 |
| Likely benign | 15 |
| Benign | 8 |
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 45 predictions of 1,200):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 1:226634887–226634888 | acceptor_loss | 1.0000 | 5 |
| 1:226637677–226637678 | donor_loss | 1.0000 | 5 |
| 1:226637751–226637752 | acceptor_loss | 1.0000 | 5 |
| 1:226639555–226639556 | donor_loss | 1.0000 | 5 |
| 1:226639659–226639660 | acceptor_loss | 1.0000 | 4 |
| 1:226641919–226641920 | donor_loss | 1.0000 | 5 |
| 1:226647165–226647166 | donor_loss | 1.0000 | 5 |
| 1:226647381–226647382 | acceptor_loss | 1.0000 | 4 |
| 1:226648772–226648773 | acceptor_loss | 1.0000 | 6 |
| 1:226634887 | acceptor_loss | 0.9900 |
AlphaMissense
1,823 missense substitutions predicted likely pathogenic (of 6,164 scored), across 377 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| M773 | 9 | 0.954 | 0.998 |
| M797 | 9 | 0.953 | 0.998 |
| M729 | 9 | 0.920 | 0.997 |
| M769 | 9 | 0.917 | 0.993 |
| M895 | 9 | 0.917 | 0.998 |
| M742 | 9 | 0.879 | 0.996 |
| M654 | 9 | 0.859 | 0.978 |
| M704 | 9 | 0.855 | 0.969 |
| M746 | 9 | 0.836 | 0.991 |
| D743 | 8 | 0.999 | 1.000 |
| D897 | 8 | 0.999 | 1.000 |
| H676 | 8 | 0.993 | 0.999 |
| F680 | 8 | 0.993 | 1.000 |
| F898 | 8 | 0.993 | 0.999 |
| F883 | 8 | 0.988 | 1.000 |
| H874 | 8 | 0.981 | 0.998 |
| F811 | 8 | 0.980 | 0.999 |
| F871 | 8 | 0.980 | 0.998 |
| D768 | 8 | 0.979 | 0.995 |
| D923 | 8 | 0.979 | 0.997 |
HPA cancer prognostics
RNA cancer specificity: Cancer enhanced (Skin Cutaneous Melanoma)
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
2 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Kidney Renal Clear Cell Carcinoma (TCGA) | favorable | 7.25e-06 |
| Kidney Renal Clear Cell Carcinoma (validation) | favorable | 0.000237 |
Disease associations
OMIM: gene MIM:147522 | disease phenotypes:
GenCC curated gene-disease
2 curated gene-disease records:
| Disease | Classification | Inheritance | Records |
|---|---|---|---|
| severe combined immunodeficiency | Limited | Autosomal recessive | |
| Tourette syndrome | No Known Disease Relationship | Unknown |
ClinGen Gene-Disease Validity
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
1 validity classifications:
| Disease | Classification | Inheritance |
|---|---|---|
| ITPKB deficiency | Limited | AR |
Genomics England panels (PanelApp)
Clinical diagnostic gene panels including this gene (2 panels, 0 green/diagnostic-grade). Confidence: green = diagnostic, amber = moderate.
2 panels:
| Panel | Rating |
|---|---|
| COVID-19 research | amber |
| Primary immunodeficiency or monogenic inflammatory bowel disease | amber |
Mondo (1): severe combined immunodeficiency (MONDO:0015974)
GWAS associations
13 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST009325_8 | Parkinson’s disease or first degree relation to individual with Parkinson’s disease | 1e-15 |
| GCST90002382_77 | Eosinophil percentage of white cells | 4e-13 |
| GCST010002_7 | Refractive error | 1e-12 |
| GCST004902_14 | Parkinson’s disease | 2e-11 |
| GCST012490_422 | Femur bone mineral density x serum urate levels interaction | 4e-11 |
| GCST010043_118 | Asthma | 2e-10 |
| GCST010049_4 | Parkinson’s disease | 8e-10 |
| GCST005038_75 | Allergic disease (asthma, hay fever or eczema) | 2e-9 |
| GCST010042_29 | Asthma | 2e-9 |
| GCST008306_4 | Dentures | 1e-8 |
| GCST008295_13 | Number of decayed, missing and filled tooth surfaces or use of dentures | 3e-8 |
| GCST010991_15 | Parkinson’s disease | 6e-8 |
| GCST001521_6 | Subcutaneous adipose tissue | 6e-6 |
EFO canonical traits (from GWAS)
3 canonical traits:
| EFO ID | Trait name |
|---|---|
| EFO:0010078 | dentures |
| EFO:0004531 | urate measurement |
| EFO:0007991 | eosinophil percentage of leukocytes |
MeSH disease descriptors
2 disease descriptors:
| Descriptor | Name | Tree numbers |
|---|---|---|
| D016511 | Severe Combined Immunodeficiency | C16.320.798.750; C16.614.815; C18.452.284.800; C20.673.795.750 |
| D005879 | Tourette Syndrome | C10.228.140.079.898; C10.228.662.825.800; C10.574.500.850; C16.320.400.820; F03.625.992.850 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5165 (SINGLE PROTEIN)
PharmGKB: 1 entry (CPIC guideline: no)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Inositol 1,4,5-trisphosphate 3-kinases
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| GNF362 | Inhibition | 8.05 | pIC50 |
CTD chemical–gene interactions
42 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| (+)-JQ1 compound | decreases expression | 3 |
| Valproic Acid | affects expression, decreases expression | 3 |
| bisphenol A | decreases methylation, increases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Tobacco Smoke Pollution | decreases expression, decreases methylation | 2 |
| GSK-J4 | increases expression | 1 |
| FR900359 | decreases phosphorylation | 1 |
| methylmercuric chloride | increases expression | 1 |
| alpha-pinene | affects cotreatment, decreases expression, increases abundance | 1 |
| trichostatin A | affects cotreatment, increases expression | 1 |
| ochratoxin A | increases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| aflatoxin B2 | increases methylation | 1 |
| methacrylaldehyde | affects cotreatment, decreases expression, increases abundance | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression, affects cotreatment, decreases expression | 1 |
| avobenzone | increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| abrine | decreases expression | 1 |
| dorsomorphin | increases expression, affects cotreatment | 1 |
| Sunitinib | decreases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Acrolein | affects cotreatment, decreases expression, increases abundance | 1 |
| Air Pollutants | affects cotreatment, decreases expression, increases abundance | 1 |
| Benzo(a)pyrene | decreases methylation, increases methylation | 1 |
| Doxorubicin | decreases expression | 1 |
| Lead | affects expression | 1 |
| Lipopolysaccharides | decreases expression, affects response to substance, increases expression, affects cotreatment | 1 |
| Methapyrilene | increases methylation | 1 |
| Ozone | affects cotreatment, decreases expression, increases abundance | 1 |
ChEMBL screening assays
2 unique, capped per target: 2 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3721023 | Binding | Inhibition of ITPKb in human Jurkat cells assessed as reduction in conversion of IP3 to IP4 using [3H]-myo-inositol incubated for 5 mins by beta-RAM radio-HPLC method | Compounds and compositions as ITPKB inhibitors |
Cellosaurus cell lines
4 cell lines: 3 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D7ST | Ubigene A-549 ITPKB KO | Cancer cell line | Male |
| CVCL_D8NK | Ubigene HCT 116 ITPKB KO | Cancer cell line | Male |
| CVCL_D9HK | Ubigene HEK293 ITPKB KO | Transformed cell line | Female |
| CVCL_E0FP | Ubigene HeLa ITPKB KO | Cancer cell line | Female |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
showing 60 of 278 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT00152750 | Phase 4 | UNKNOWN | Study of Clonidine on Sleep Architecture in Children With Tourette’s Syndrome (TS) and Comorbid ADHD |
| NCT00226824 | Phase 4 | TERMINATED | Safety Study of Galantamine in Tic Disorders |
| NCT00241176 | Phase 4 | COMPLETED | Open Label Trial of Aripiprazole in Children and Adolescents With Tourette’s Disorder |
| NCT00370838 | Phase 4 | COMPLETED | Comparison of Keppra and Clonidine in the Treatment of Tics |
| NCT01018056 | Phase 4 | COMPLETED | Developing New Treatments for Tourette Syndrome: Therapeutic Trials With Modulators of Glutamatergic Neurotransmission |
| NCT01547000 | Phase 4 | COMPLETED | Guanfacine in Children With Tic Disorders |
| NCT03239210 | Phase 4 | COMPLETED | Effects of Ondansetron in Obsessive-compulsive and Tic Disorders |
| NCT00004376 | Phase 3 | COMPLETED | Phase III Randomized, Double-Blind, Placebo-Controlled Study of Guanfacine for Tourette Syndrome and Attention Deficit Hyperactivity Disorder |
| NCT00206323 | Phase 3 | COMPLETED | A Randomized, Placebo-controlled, Tourette Syndrome Study. |
| NCT00206336 | Phase 3 | COMPLETED | An Open-label Study to Determine the Efficacy and Safety of Topiramate in the Treatment of Tourette Syndrome. |
| NCT00478842 | Phase 3 | COMPLETED | Pallidal Stimulation and Gilles de la Tourette Syndrome |
| NCT00681863 | Phase 3 | TERMINATED | Open-label Extension Study of Pramipexole in the Treatment of Children and Adolescents With Tourette Syndrome |
| NCT01501695 | Phase 3 | COMPLETED | Phase III Study of 5LGr to Treat Tic Disorder |
| NCT03087201 | Phase 3 | COMPLETED | CANNAbinoids in the Treatment of TICS (CANNA-TICS) |
| NCT03487783 | Phase 3 | COMPLETED | Aripiprazole Oral Solution in the Treatment of Children and Adolescents With Tourette’s Syndrome |
| NCT03567291 | Phase 3 | TERMINATED | Evaluation of Safety and Tolerability of Long-term TEV-50717 (Deutetrabenazine) for Treatment of Tourette Syndrome in Children and Adolescents |
| NCT03571256 | Phase 3 | COMPLETED | A Study to Test if TEV-50717 is Effective in Relieving Tics Associated With Tourette Syndrome (TS) |
| NCT06021522 | Phase 3 | ACTIVE_NOT_RECRUITING | A Study to Evaluate Long-term Safety of Ecopipam Tablets in Children, Adolescents and Adults With Tourette’s Disorder |
| NCT00220766 | Phase 3 | COMPLETED | Rapid Infusion of Immune Globulin Intravenous (Human) In Primary Immunodeficiency Patients |
| NCT01420627 | Phase 3 | COMPLETED | EZN-2279 in Patients With ADA-SCID |
| NCT06940570 | Phase 3 | SUSPENDED | Methadone as an Alternative Treatment for Children Underdoing HSCT |
| NCT00322101 | Phase 3 | COMPLETED | Low-Dose or High-Dose Conditioning Followed by Peripheral Blood Stem Cell Transplant in Treating Patients With Myelodysplastic Syndrome or Acute Myelogenous Leukemia |
| NCT00799461 | Phase 3 | COMPLETED | Internet-Based Program With or Without Telephone-Based Problem-Solving Training in Helping Long-Term Survivors of Hematopoietic Stem Cell Transplant Cope With Late Complications |
| NCT01305200 | Phase 3 | COMPLETED | Supersaturated Calcium Phosphate Rinse in Preventing Oral Mucositis in Young Patients Undergoing Autologous or Donor Stem Cell Transplant |
| NCT00004393 | Phase 2 | COMPLETED | Phase II Double Blind Placebo Controlled Trial of Risperidone in Tourette Syndrome |
| NCT00004652 | Phase 2 | COMPLETED | Phase II Pilot Controlled Study of Short Vs Longer Term Pimozide (Orap) Therapy in Tourette Syndrome |
| NCT00231985 | Phase 2 | COMPLETED | Effectiveness of Behavior Therapy and Psychosocial Therapy for the Treatment of Tourette Syndrome and Chronic Tic Disorder |
| NCT00311909 | Phase 2 | COMPLETED | Thalamic Deep Brain Stimulation for Tourette Syndrome |
| NCT00529308 | Phase 2 | COMPLETED | Transcranial Magnetic Stimulation (TMS) for Individuals With Tourette’s Syndrome |
| NCT00558467 | Phase 2 | COMPLETED | Pramipexole Pilot Phase II Study in Children and Adolescents With Tourette Disorder According to DSM-IV Criteria |
| NCT01043549 | Phase 2 | TERMINATED | Repetitive Transcranial Magnetic Stimulation of the Posterior Parietal Cortex in Patients Suffering From Gilles de la Tourette Syndrome |
| NCT01133353 | Phase 2 | WITHDRAWN | A Study of the Effectiveness and Safety of Tetrabenazine MR in Pediatric Subjects With Tourette’s Syndrome |
| NCT01475383 | Phase 2 | WITHDRAWN | Study Evaluating The Safety And Efficacy Of PF-03654746 In Adult Subjects With Tourette’s Syndrome |
| NCT01647269 | Phase 2 | COMPLETED | A Trial of Bilateral Deep Brain Stimulation to the Globus Pallidus Internum in Tourette Syndrome |
| NCT01904773 | Phase 2 | COMPLETED | Safety, Tolerability, Pharmacokinetic, and Efficacy Study of AZD5213 in Adolescents With Tourette’s Disorder |
| NCT02102698 | Phase 2 | COMPLETED | Ecopipam Treatment of Tourette’s Syndrome in Subjects 7-17 Years |
| NCT02217007 | Phase 2 | WITHDRAWN | A Trial Evaluating the Efficacy, Safety, and Pharmacokinetics of SNC-102 in Subjects With Tourette Syndrome |
| NCT02247206 | Phase 2 | COMPLETED | VoIP Delivered Behavior Therapy for Tourette Syndrome |
| NCT02581865 | Phase 2 | COMPLETED | Safety and Efficacy Study of NBI-98854 in Adults With Tourette Syndrome |
| NCT02619084 | Phase 2 | COMPLETED | Subthalamic Stimulation in Tourette’s Syndrome |
| NCT02679079 | Phase 2 | COMPLETED | Safety and Efficacy Study of NBI-98854 in Children and Adolescents With Tourette Syndrome |
| NCT02879578 | Phase 2 | COMPLETED | Safety and Tolerability Study of NBI-98854 for the Treatment of Subjects With Tourette Syndrome |
| NCT03066193 | Phase 2 | COMPLETED | Efficacy of a Therapeutic Combination of Dronabinol and PEA for Tourette Syndrome |
| NCT03247244 | Phase 2 | TERMINATED | Safety and Efficacy of Cannabis in Tourette Syndrome |
| NCT03325010 | Phase 2 | COMPLETED | Safety, Tolerability, and Efficacy of NBI-98854 for the Treatment of Pediatric Subjects With Tourette Syndrome |
| NCT03444038 | Phase 2 | COMPLETED | Open-Label Safety and Tolerability Study of NBI-98854 for the Treatment of Pediatric Subjects With Tourette Syndrome |
| NCT03530293 | Phase 2 | TERMINATED | Safety and Efficacy of NBI-98854 in Pediatric Subjects With Tourette Syndrome |
| NCT03625453 | Phase 2 | COMPLETED | Study of ABX-1431 in Adult Patients With Tourette Syndrome or Chronic Motor Tic Disorder |
| NCT03651726 | Phase 2 | UNKNOWN | A Study to Examine the Efficacy of a Therapeutic THX-110 for Tourette Syndrome |
| NCT03732534 | Phase 2 | TERMINATED | Rollover Study for Continuing NBI-98854 Administration in Pediatric Subjects With Tourette Syndrome |
| NCT03944447 | Phase 2 | UNKNOWN | Outcomes Mandate National Integration With Cannabis as Medicine |
| NCT04007991 | Phase 2 | COMPLETED | Ecopipam Tablets to Study Tourette’s Syndrome in Children and Adolescents |
| NCT04354103 | Phase 2 | TERMINATED | Atomoxetine in Patients With Tourette’s Syndrome |
| NCT04978428 | Phase 2 | COMPLETED | Epidiolex in Obsessive Compulsive Disorder and Related Disorders |
| NCT05126888 | Phase 2 | NOT_YET_RECRUITING | SCI-110 in the Treatment of Tourette Syndrome |
| NCT05434546 | Phase 2 | COMPLETED | A Study to Explore the Effect of Sepranolone in Tourette Syndrome |
| NCT06081348 | Phase 2 | RECRUITING | Sertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders |
| NCT06194305 | Phase 2 | RECRUITING | Multimodal Profiling of Response to Pediatric Comprehensive Behavioral Intervention for Tics |
| NCT06315751 | Phase 2 | ACTIVE_NOT_RECRUITING | Efficacy and Safety of Gemlapodect (NOE-105) in Adults and Adolescents With Tourette Syndrome |
| NCT06678737 | Phase 2 | RECRUITING | CBIT+TMS R33 Phase |
Related Atlas pages
- Associated diseases: Tourette syndrome, severe combined immunodeficiency
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): myeloproliferative neoplasm, unclassifiable, severe combined immunodeficiency