JAKMIP2-AS1

Summary

JAKMIP2-AS1 (JAKMIP2 antisense RNA 1, HGNC:27203) is a long non-coding RNA gene on chromosome 5q32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27203
Approved symbol	JAKMIP2-AS1
Name	JAKMIP2 antisense RNA 1
Location	5q32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000280780
Ensembl biotype	lncRNA
Entrez	153469
RNAcentral	URS000075C839 — lncRNA, 1920 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000626945, ENST00000627433, ENST00000630514, ENST00000630801, ENST00000686563, ENST00000689846, ENST00000702407, ENST00000783082, ENST00000783083, ENST00000783084, ENST00000783085, ENST00000783086

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000626945 — 4 exons

Exon	Start	End
ENSE00003765495	147595440	147595540
ENSE00003766209	147559994	147560137
ENSE00003766589	147660453	147662009
ENSE00003767465	147594360	147594477

Expression profiles

Bgee: expression breadth ubiquitous, 141 present calls, max score 91.03.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 1.9905 / max 242.7905, expressed in 156 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
59245	1.9422	154
59243	0.0313	9
59244	0.0170	2

Top tissues by expression

231 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	91.03	gold quality
sural nerve	UBERON:0015488	75.46	gold quality
adrenal tissue	UBERON:0018303	72.06	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	65.01	gold quality
cortical plate	UBERON:0005343	64.36	gold quality
ganglionic eminence	UBERON:0004023	63.76	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.68	gold quality
colonic epithelium	UBERON:0000397	59.84	silver quality
calcaneal tendon	UBERON:0003701	58.87	gold quality
right uterine tube	UBERON:0001302	58.64	gold quality
monocyte	CL:0000576	58.50	gold quality
oviduct epithelium	UBERON:0004804	55.98	silver quality
islet of Langerhans	UBERON:0000006	53.90	gold quality
right lobe of liver	UBERON:0001114	53.13	gold quality
corpus callosum	UBERON:0002336	52.91	gold quality
gall bladder	UBERON:0002110	52.81	gold quality
fallopian tube	UBERON:0003889	52.71	gold quality
stromal cell of endometrium	CL:0002255	52.57	silver quality
vermiform appendix	UBERON:0001154	52.20	gold quality
muscle of leg	UBERON:0001383	51.00	gold quality
nasal cavity mucosa	UBERON:0001826	50.66	gold quality
gastrocnemius	UBERON:0001388	50.09	gold quality
right adrenal gland	UBERON:0001233	50.02	gold quality
adrenal gland	UBERON:0002369	49.27	gold quality
right hemisphere of cerebellum	UBERON:0014890	49.04	gold quality
prefrontal cortex	UBERON:0000451	48.87	gold quality
adenohypophysis	UBERON:0002196	48.76	gold quality
upper lobe of left lung	UBERON:0008952	48.63	gold quality
liver	UBERON:0002107	48.62	gold quality
right adrenal gland cortex	UBERON:0035827	48.57	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.76

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.