KCND3-AS1

Summary

KCND3-AS1 (KCND3 antisense RNA 1, HGNC:40317) is a long non-coding RNA gene on chromosome 1p13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40317
Approved symbol	KCND3-AS1
Name	KCND3 antisense RNA 1
Location	1p13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237556
Ensembl biotype	lncRNA
Entrez	100873995
RNAcentral	URS00008121BD — lncRNA, 448 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000419258, ENST00000427471, ENST00000441125

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000419258 — 4 exons

Exon	Start	End
ENSE00001614035	111909685	111909716
ENSE00001614314	111910786	111910930
ENSE00001636836	111910123	111910276
ENSE00001666064	111909842	111909893

Expression profiles

Bgee: expression breadth ubiquitous, 102 present calls, max score 92.65.

Top tissues by expression

102 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.65	gold quality
skeletal muscle tissue	UBERON:0001134	74.88	gold quality
corpus callosum	UBERON:0002336	72.66	gold quality
left testis	UBERON:0004533	70.57	gold quality
colonic epithelium	UBERON:0000397	70.32	gold quality
testis	UBERON:0000473	70.06	gold quality
right testis	UBERON:0004534	69.06	gold quality
hindlimb stylopod muscle	UBERON:0004252	64.49	gold quality
tonsil	UBERON:0002372	63.28	silver quality
liver	UBERON:0002107	63.11	gold quality
sural nerve	UBERON:0015488	59.19	silver quality
monocyte	CL:0000576	57.38	gold quality
primary visual cortex	UBERON:0002436	56.72	gold quality
blood	UBERON:0000178	56.03	gold quality
superior frontal gyrus	UBERON:0002661	55.43	gold quality
islet of Langerhans	UBERON:0000006	55.21	gold quality
cortex of kidney	UBERON:0001225	54.63	gold quality
prefrontal cortex	UBERON:0000451	54.08	gold quality
uterine cervix	UBERON:0000002	54.02	gold quality
urinary bladder	UBERON:0001255	53.98	silver quality
apex of heart	UBERON:0002098	53.73	gold quality
cerebellar cortex	UBERON:0002129	53.36	gold quality
cerebellum	UBERON:0002037	53.32	gold quality
adrenal tissue	UBERON:0018303	53.26	gold quality
right hemisphere of cerebellum	UBERON:0014890	53.23	gold quality
right lobe of liver	UBERON:0001114	53.20	gold quality
cerebellar hemisphere	UBERON:0002245	52.93	gold quality
muscle of leg	UBERON:0001383	52.80	gold quality
gastrocnemius	UBERON:0001388	52.28	gold quality
endometrium	UBERON:0001295	52.03	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.