KCNIP1-AS2

Summary

KCNIP1-AS2 (KCNIP1 antisense RNA 2, HGNC:40709) is a long non-coding RNA gene on chromosome 5q35.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40709
Approved symbol	KCNIP1-AS2
Name	KCNIP1 antisense RNA 2
Location	5q35.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253858
Ensembl biotype	lncRNA
Entrez	141731999

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000524312

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000524312 — 2 exons

Exon	Start	End
ENSE00002127205	170483806	170483981
ENSE00002133586	170486017	170486407

Expression profiles

Bgee: expression breadth ubiquitous, 103 present calls, max score 98.01.

Top tissues by expression

103 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	98.01	gold quality
heart left ventricle	UBERON:0002084	59.57	gold quality
gall bladder	UBERON:0002110	58.53	gold quality
endometrium	UBERON:0001295	58.36	gold quality
apex of heart	UBERON:0002098	56.92	gold quality
ectocervix	UBERON:0012249	56.52	gold quality
heart	UBERON:0000948	56.45	gold quality
tonsil	UBERON:0002372	55.90	gold quality
spleen	UBERON:0002106	54.59	gold quality
lymph node	UBERON:0000029	54.56	gold quality
urinary bladder	UBERON:0001255	53.40	gold quality
prefrontal cortex	UBERON:0000451	53.39	gold quality
islet of Langerhans	UBERON:0000006	52.85	gold quality
cortex of kidney	UBERON:0001225	51.89	gold quality
smooth muscle tissue	UBERON:0001135	51.77	gold quality
endocervix	UBERON:0000458	51.58	gold quality
calcaneal tendon	UBERON:0003701	51.57	silver quality
monocyte	CL:0000576	51.43	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	51.06	gold quality
tibial nerve	UBERON:0001323	50.84	gold quality
blood	UBERON:0000178	50.39	gold quality
kidney	UBERON:0002113	49.78	gold quality
body of uterus	UBERON:0009853	49.57	gold quality
liver	UBERON:0002107	48.91	silver quality
pancreas	UBERON:0001264	48.87	gold quality
adult mammalian kidney	UBERON:0000082	48.86	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	48.57	gold quality
subcutaneous adipose tissue	UBERON:0002190	48.05	gold quality
muscle of leg	UBERON:0001383	47.63	gold quality
body of pancreas	UBERON:0001150	47.34	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.81

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.