KCNN2-AS1

Summary

KCNN2-AS1 (KCNN2 antisense RNA 1, HGNC:59115) is a long non-coding RNA gene on chromosome 5q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:59115
Approved symbol	KCNN2-AS1
Name	KCNN2 antisense RNA 1
Location	5q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000246316
Ensembl biotype	lncRNA
Entrez	101927078

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000506265, ENST00000514115

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000506265 — 4 exons

Exon	Start	End
ENSE00001982077	114667609	114667747
ENSE00001991181	114668108	114668231
ENSE00002049906	114662961	114663225
ENSE00002075601	114668343	114668406

Expression profiles

Bgee: expression breadth broad, 93 present calls, max score 76.72.

Top tissues by expression

93 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.72	gold quality
cortical plate	UBERON:0005343	68.33	gold quality
ganglionic eminence	UBERON:0004023	60.72	gold quality
right adrenal gland cortex	UBERON:0035827	58.31	gold quality
skeletal muscle tissue	UBERON:0001134	57.82	gold quality
right adrenal gland	UBERON:0001233	57.31	gold quality
urinary bladder	UBERON:0001255	56.13	gold quality
liver	UBERON:0002107	56.03	gold quality
left adrenal gland	UBERON:0001234	55.58	gold quality
adrenal gland	UBERON:0002369	55.44	gold quality
right lobe of liver	UBERON:0001114	54.96	gold quality
prefrontal cortex	UBERON:0000451	54.73	gold quality
left adrenal gland cortex	UBERON:0035825	54.35	gold quality
superior frontal gyrus	UBERON:0002661	54.29	gold quality
corpus callosum	UBERON:0002336	51.51	gold quality
frontal cortex	UBERON:0001870	51.26	gold quality
right hemisphere of cerebellum	UBERON:0014890	51.23	gold quality
monocyte	CL:0000576	51.16	silver quality
cerebellar cortex	UBERON:0002129	50.89	gold quality
cerebellum	UBERON:0002037	50.84	gold quality
fundus of stomach	UBERON:0001160	50.80	gold quality
cerebellar hemisphere	UBERON:0002245	50.78	gold quality
blood	UBERON:0000178	49.81	gold quality
Brodmann (1909) area 9	UBERON:0013540	49.51	gold quality
pituitary gland	UBERON:0000007	49.32	gold quality
muscle of leg	UBERON:0001383	49.26	gold quality
right atrium auricular region	UBERON:0006631	49.20	gold quality
cerebral cortex	UBERON:0000956	49.16	gold quality
prostate gland	UBERON:0002367	48.88	gold quality
right frontal lobe	UBERON:0002810	48.70	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.78

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.