KCNQ3
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Also known as Kv7.3
Summary
KCNQ3 (potassium voltage-gated channel subfamily Q member 3, HGNC:6297) is a protein-coding gene on chromosome 8q24.22, encoding Potassium voltage-gated channel subfamily KQT member 3 (O43525). Pore-forming subunit of the voltage-gated potassium (Kv) M-channel which is responsible for the M-current, a key controller of neuronal excitability.
This gene encodes a protein that functions in the regulation of neuronal excitability. The encoded protein forms an M-channel by associating with the products of the related KCNQ2 or KCNQ5 genes, which both encode integral membrane proteins. M-channel currents are inhibited by M1 muscarinic acetylcholine receptors and are activated by retigabine, a novel anti-convulsant drug. Defects in this gene are a cause of benign familial neonatal convulsions type 2 (BFNC2), also known as epilepsy, benign neonatal type 2 (EBN2). Alternative splicing of this gene results in multiple transcript variants.
Source: NCBI Gene 3786 — RefSeq curated summary.
At a glance
- Gene–disease (curated): complex neurodevelopmental disorder (Definitive, ClinGen) — +5 more curated relationships
- GWAS associations: 5
- Clinical variants (ClinVar): 1,489 total — 26 pathogenic, 25 likely-pathogenic
- Phenotypes (HPO): 54
- Druggable target: yes — 3 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_004519
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6297 |
| Approved symbol | KCNQ3 |
| Name | potassium voltage-gated channel subfamily Q member 3 |
| Location | 8q24.22 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | Kv7.3 |
| Ensembl gene | ENSG00000184156 |
| Ensembl biotype | protein_coding |
| OMIM | 602232 |
| Entrez | 3786 |
Gene structure
Transcript identifiers
Ensembl transcripts: 7 — 4 protein_coding, 2 nonsense_mediated_decay, 1 retained_intron
ENST00000388996, ENST00000519445, ENST00000519589, ENST00000521134, ENST00000638588, ENST00000639358, ENST00000639496
RefSeq mRNA: 2 — MANE Select: NM_004519
NM_001204824, NM_004519
CCDS: CCDS34943, CCDS56554
Canonical transcript exons
ENST00000388996 — 15 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001292248 | 132140076 | 132140178 |
| ENSE00001306403 | 132480147 | 132481095 |
| ENSE00001307569 | 132141129 | 132141331 |
| ENSE00001327355 | 132120861 | 132129996 |
| ENSE00003511798 | 132175453 | 132175608 |
| ENSE00003530514 | 132174239 | 132174349 |
| ENSE00003534966 | 132132180 | 132132264 |
| ENSE00003546076 | 132184241 | 132184367 |
| ENSE00003585982 | 132134290 | 132134388 |
| ENSE00003591610 | 132180157 | 132180329 |
| ENSE00003592914 | 132137885 | 132138016 |
| ENSE00003634278 | 132163468 | 132163494 |
| ENSE00003663352 | 132186091 | 132186181 |
| ENSE00003677885 | 132172598 | 132172693 |
| ENSE00003687834 | 132170334 | 132170428 |
Expression profiles
Bgee: expression breadth ubiquitous, 180 present calls, max score 96.26.
FANTOM5 (CAGE): breadth broad, TPM avg 1.4851 / max 49.1324, expressed in 370 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 95055 | 0.5572 | 159 |
| 95054 | 0.5294 | 155 |
| 95048 | 0.3041 | 132 |
| 95049 | 0.0886 | 34 |
| 95050 | 0.0058 | 2 |
Top tissues by expression
282 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| ganglionic eminence | UBERON:0004023 | 96.26 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 96.24 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 94.19 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 93.22 | gold quality |
| endothelial cell | CL:0000115 | 93.00 | gold quality |
| pons | UBERON:0000988 | 92.93 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 92.92 | gold quality |
| postcentral gyrus | UBERON:0002581 | 91.62 | gold quality |
| cortical plate | UBERON:0005343 | 91.55 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 91.42 | gold quality |
| parietal lobe | UBERON:0001872 | 91.24 | gold quality |
| entorhinal cortex | UBERON:0002728 | 91.07 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 91.03 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 88.34 | gold quality |
| primary visual cortex | UBERON:0002436 | 88.25 | gold quality |
| occipital lobe | UBERON:0002021 | 88.12 | gold quality |
| prefrontal cortex | UBERON:0000451 | 87.44 | gold quality |
| dorsal plus ventral thalamus | UBERON:0001897 | 86.59 | gold quality |
| temporal lobe | UBERON:0001871 | 86.07 | gold quality |
| frontal cortex | UBERON:0001870 | 85.45 | gold quality |
| neocortex | UBERON:0001950 | 85.32 | gold quality |
| ventral tegmental area | UBERON:0002691 | 85.32 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 84.89 | gold quality |
| cerebral cortex | UBERON:0000956 | 84.86 | gold quality |
| nucleus accumbens | UBERON:0001882 | 84.53 | gold quality |
| telencephalon | UBERON:0001893 | 84.31 | gold quality |
| cingulate cortex | UBERON:0003027 | 83.83 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 83.66 | gold quality |
| right frontal lobe | UBERON:0002810 | 83.19 | gold quality |
| caudate nucleus | UBERON:0001873 | 83.05 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-35 | yes | 32.59 |
| E-HCAD-25 | yes | 15.00 |
| E-ANND-3 | yes | 8.95 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): REST, SP1
miRNA regulators (miRDB)
329 targeting KCNQ3, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-200B-3P | 100.00 | 73.31 | 2693 |
| HSA-MIR-200C-3P | 100.00 | 73.35 | 2685 |
| HSA-MIR-429 | 100.00 | 73.44 | 2698 |
| HSA-MIR-1252-5P | 100.00 | 69.80 | 2774 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-6129 | 100.00 | 66.46 | 2080 |
| HSA-MIR-4476 | 100.00 | 68.18 | 2030 |
| HSA-MIR-9-5P | 100.00 | 72.28 | 2361 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-6876-5P | 100.00 | 67.68 | 2126 |
| HSA-MIR-4510 | 100.00 | 66.60 | 2050 |
| HSA-MIR-6127 | 100.00 | 66.76 | 2188 |
| HSA-MIR-6130 | 100.00 | 66.69 | 2012 |
| HSA-MIR-6133 | 100.00 | 66.48 | 2064 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-4776-3P | 100.00 | 68.73 | 1340 |
| HSA-MIR-3120-5P | 100.00 | 65.56 | 965 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-4283 | 100.00 | 66.42 | 2097 |
| HSA-MIR-4789-3P | 99.99 | 70.75 | 2484 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-6870-5P | 99.99 | 68.55 | 2115 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-4803 | 99.98 | 71.99 | 3117 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-4482-3P | 99.98 | 72.50 | 3147 |
Literature-anchored findings (GeneRIF, showing 40)
- A cytoplasmic carboxy-terminal subunit interaction domain (sid) suffices to transfer assembly properties between KCNQ3 and KCNQ1. (PMID:12524525)
- specific parts of the C-terminus enable the interaction between KCNQ2 and KCNQ3 channels and that different parts of the KCNQ3 C-terminus are important for regulating current amplitude (PMID:12640002)
- Coexpressed KCNQ2 plus KCNQ3 cDNAs generate channels with 1:1 (KCNQ2:KCNQ3) stoichiometry in CHO cells and that native M channels in SCG neurons adopt the same conformation during development (PMID:12832524)
- There may be a genetic contribution of this gene in juvenile myoclonic epilepsy in a South Indian population. (PMID:12928862)
- Src associates with KCNQ2-5 subunits but phosphorylates only KCNQ3-5. (PMID:15304482)
- After KCNQ2/3 heteromerization, current levels can augment as much as 10-fold, and we have discovered that there are three processes underlying this potentiation. (PMID:15483133)
- the KCNQ2 mutation is responsible for the benign familial neonatal convulsion phenotype, possibly because of haplo-insufficiency, whereas the KCNQ3 variant is functionally silent (PMID:16235065)
- Mutagenesis and electrophysiological studies of the second site, located in the S4-S5 intracellular loop of all KCNQ subunits, reveal a mechanism of channel inhibition (PMID:16319223)
- the diacylglycerol produced during activation of phospholipase c, any activation of protein kinase C that it may stimulate, and downstream products of its metabolism are not essential players in the acute muscarinic modulation of KCNQ2/3 channels (PMID:16721610)
- Several BFNC mutations of KCNQ2 and KCNQ3 disrupt surface expression or polarized surface distribution of KCNQ channels, thereby revealing impaired targeting of KCNQ channels to axonal surfaces as a benign familial neonatal convulsions (BFNC) etiology. (PMID:16735477)
- depletion of phosphatidylinositol 4,5-bisphosphate suffices to suppress KCNQ current fully, and other second messengers are not needed (PMID:16990515)
- ICA-27243 is a novel and selective KCNQ3 potassium channel activator. (PMID:18089837)
- The expression of KCNQ3 increased in late fetal life to infancy in brain. (PMID:18166285)
- This study identified a novel missense mutation of KCNQ3, c.988C>T located within exon 6. c.988C>T led to the substitution Cys for Arg in amino acid position 330 (p.R330C) in KCNQ3 potassium channel. (PMID:18249525)
- A three-dimensional homology model in the W309R mutant indicated that the R side chain of pore helices is too far from the Y side chain of the selectivity filter to interact via hydrogen bonds with each other and stabilize the pore structure. (PMID:18425618)
- Sequence variations of the KCNQ2 (and KCNQ3)genes may contribute to the etiology of common idiopathic epilepsy syndromes. (PMID:18625963)
- among the allowed assembly conformations are KCNQ3/4 and KCNQ4/5 heteromers. (PMID:18786918)
- most wild-type channels are functionally silent, with rearrangements of the pore-loop architecture induced by the presence of a hydroxyl-containing residue at the 315 position “unlocking” the channels into a conductive conformation (PMID:18790849)
- mutations in the SCN1A gene are differentially involved in the pathogenesis of and sequence variations of the KCNQ2 and KCNQ3 genes may contribute to the etiology of rare and common idiopathic epilepsy syndromes [review] (PMID:19464834)
- This study reported that the presence of this uncommon residue at position 315 has a strong impact on the stability of the homotetramers and on channel trafficking. (PMID:20610766)
- Data show that KCNQ3 and KCNE5 mRNA expressions were significantly upregulated in preeclampsia. (PMID:21730298)
- Different structural determinants, identified at the N and C termini of KCNQ3, prevent the effects of syntaxin 1A and calmodulin, respectively. (PMID:21976501)
- constitutive tethering of calmodulin is not required for Kv7 channel function (PMID:21980481)
- the Kv7.2-Kv7.3 heteromer assembles as a tetramer with a predominantly 2:2 subunit stoichiometry and with a random subunit arrangement. (PMID:22334706)
- This study demonistrated that benign neonatal sleep myoclonus can show autosomal dominant inheritance but not allelic to KCNQ3. (PMID:22447848)
- A medium-throughput assay reliably detects changes in the biophysical properties of three classes of KCNQ2/3 channels and peak current amplitude and therefore may serve as a reliable assay to evaluate KCNQ2/3 openers and blockers. (PMID:23002961)
- the single KCNQ channel in Drosophila (dKCNQ) has similar electrophysiological properties to neuronal KCNQ2/3 (PMID:23209695)
- KCNQ3 mutations might be involved in families with infantile seizures. (PMID:23360469)
- We described clinical, genetic, and functional data from 17 families with a diagnosis of benign familial neonatal epilepsy caused by KCNQ2 or KCNQ3 mutations and we showed that some mutations lead to a reduction of Q2 channel regulation by syntaxin-1A. (PMID:24375629)
- We monitored KCNQ2/3 channel currents and translocation of PHPLCdelta1 domains as real-time indicators of PM PI(4,5)P2, and translocation of PHOSH2x2, and PHOSH1 domains as indicators of plasma membrane and Golgi PI(4)P, respectively. (PMID:24843134)
- In bipolar disorder patients’ prefrontal cortex, Kcnq3 expression was decreased, DNA methylation was decreased, and Kcnq3 mRNA was decreased compared to controls. (PMID:25041603)
- the clinical and EEG features of this patient further on expand the phenotypic variability of KCNQ3 gene mutations (PMID:25278462)
- mutations in KCNQ3, similarly to KCNQ2, can be found in patients with more severe phenotypes including intellectual disability (PMID:25524373)
- the present results suggest that gain-of-function mutations in Kv7.2/3 currents may cause human epilepsy with a severe clinical course (PMID:25740509)
- Phosphorylation of KCNQ2 and KCNQ3 anchor domains by protein kinase CK2 augments binding to AnkG. (PMID:25998125)
- a structural mechanism for the gating of the Kv7.3 PM and for the site of action of RTG as a Kv7.2/Kv7.3 K(+) current activator. (PMID:26627826)
- Carboxyl terminus helix C-D linker residues play a role in KCNQ3 current amplitudes by controlling the exit of the KCNQ3 channel from the endoplasmic reticulum. (PMID:26692086)
- Tannic acid activates Kv7.4 and Kv7.3/7.5 K(+) channels resulting in vasodilation. (PMID:26969140)
- USP36 actions extend beyond TrkA because the presence of USP36 interferes with Nedd4-2-dependent Kv7.2/3 channel regulation. (PMID:27445338)
- In the present work, a pharmacophore-based 3D-QSAR model was generated for a series of N-pyridyl and pyrimidine benzamides possessing KCNQ2/Q3 opening activity. The pharmacophore model generated contains one hydrogen bond donor (D), one hydrophobic (H), and two aromatic rings (R). They are the crucial molecular write-up detailing predicted binding efficacy of high affinity and low affinity ligands for KCNQ2/Q3 opening a (PMID:27607834)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | kcnq3 | ENSDARG00000060085 |
| mus_musculus | Kcnq3 | ENSMUSG00000056258 |
| rattus_norvegicus | Kcnq3 | ENSRNOG00000005206 |
Paralogs (31): KCNG1 (ENSG00000026559), KCNQ1 (ENSG00000053918), KCNQ2 (ENSG00000075043), KCND1 (ENSG00000102057), KCNA7 (ENSG00000104848), KCNA1 (ENSG00000111262), KCNC4 (ENSG00000116396), KCNQ4 (ENSG00000117013), KCNS1 (ENSG00000124134), KCNC1 (ENSG00000129159), KCNA5 (ENSG00000130037), KCNC3 (ENSG00000131398), KCNA10 (ENSG00000143105), KCNA6 (ENSG00000151079), KCNS2 (ENSG00000156486), KCNB1 (ENSG00000158445), KCNF1 (ENSG00000162975), KCNV1 (ENSG00000164794), KCNC2 (ENSG00000166006), KCNV2 (ENSG00000168263), KCNG4 (ENSG00000168418), KCNS3 (ENSG00000170745), KCNG3 (ENSG00000171126), KCND3 (ENSG00000171385), KCNA3 (ENSG00000177272), KCNA2 (ENSG00000177301), KCNG2 (ENSG00000178342), KCNA4 (ENSG00000182255), KCNB2 (ENSG00000182674), KCND2 (ENSG00000184408), KCNQ5 (ENSG00000185760)
Protein
Protein identifiers
Potassium voltage-gated channel subfamily KQT member 3 — O43525 (reviewed: O43525)
Alternative names: KQT-like 3, Potassium channel subunit alpha KvLQT3, Voltage-gated potassium channel subunit Kv7.3
All UniProt accessions (5): A0A1W2PNZ2, A0A1W2PQ71, A0A1W2PRN8, E7ET42, O43525
UniProt curated annotations — full annotation on UniProt →
Function. Pore-forming subunit of the voltage-gated potassium (Kv) M-channel which is responsible for the M-current, a key controller of neuronal excitability. M-channel is composed of pore-forming subunits KCNQ2 and KCNQ3 assembled as heterotetramers. The native M-current has a slowly activating and deactivating potassium conductance which plays a critical role in determining the subthreshold electrical excitability of neurons as well as the responsiveness to synaptic inputs. M-channel is selectively permeable in vitro to other cations besides potassium, in decreasing order of affinity K(+) > Rb(+) > Cs(+) > Na(+). M-channel association with SLC5A3/SMIT1 alters channel ion selectivity, increasing Na(+) and Cs(+) permeation relative to K(+). Suppressed by activation of M1 muscarinic acetylcholine receptors. KCNQ3 also associates with KCNQ5 to form a functional channel in vitro and may also contribute to the M-current in brain.
Subunit / interactions. Heterotetramer with KCNQ2; forms heterotetrameric native M-channel responsible for the M-current. Interacts with calmodulin; the interaction is calcium-independent, constitutive and participates in the proper assembly of a functional M-channel. Heteromultimer with KCNQ5. May associate with KCNE2. Interacts with IQCJ-SCHIP1. Interacts (via the pore module) with SLC5A3/SMIT1; forms a coregulatory complex that alters ion selectivity, voltage dependence and gating kinetics of the channel.
Subcellular location. Cell membrane.
Tissue specificity. Predominantly expressed in brain.
Post-translational modifications. KCNQ2/KCNQ3 are ubiquitinated by NEDD4L. Ubiquitination leads to protein degradation. Degradation induced by NEDD4L is inhibited by USP36.
Disease relevance. Seizures, benign familial neonatal 2 (BFNS2) [MIM:121201] A disorder characterized by clusters of seizures occurring in the first days of life. Most patients have spontaneous remission by 12 months of age and show normal psychomotor development. The disorder is distinguished from benign familial infantile seizures by an earlier age at onset. The disease is caused by variants affecting the gene represented in this entry. Defects in KCNQ3 may be involved in epileptic disorders. These are characterized by paroxysmal transient disturbances of the electrical activity of the brain that may be manifested as episodic impairment or loss of consciousness, abnormal motor phenomena, psychic or sensory disturbances, or perturbation of the autonomic nervous system.
Activity regulation. Phosphatidylinositol-4,5-bisphosphate (PIP2) potentiates the activation of KCNQ channels by enhancing the electro-mechanical coupling of the voltage-sensing domain (VSD) and the pore-forming domain (PD). In the closed state of the channel, PIP2 is anchored at the S2-S3 loop; upon channel activation, PIP2 interacts with the S4-S5 linker and is involved in channel gating. Calcium suppresses KCNQ2-KCNQ3 channel currents, with calcium-bound calmodulin inducing a change in channel configuration which leads to the reduction of channel affinity for PIP2 and subsequent current suppression. M-channel is activated by the anticonvulsant retigabine.
Domain organisation. Each subunit contains six transmembrane segments (S1-S6) with S1-S4 forming one voltage sensing domain (VSD) and S5-S6 contributing to form one quarter of an interlocking pore-forming domain (PD). The S4-S5 linker preferentially interacts with PIP2 in the open-state KCNQ2 channel, whereas the S2-S3 loop interacts with PIP2 in the closed state. The intracellular C-terminal domain is bound constitutively by calmodulin (CaM). This domain plays key functions in channel tetramerization, trafficking, and gating.
Similarity. Belongs to the potassium channel family. KQT (TC 1.A.1.15) subfamily. Kv7.3/KCNQ3 sub-subfamily.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| O43525-1 | 1 | yes |
| O43525-2 | 2 |
RefSeq proteins (2): NP_001191753, NP_004510* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR003937 | K_chnl_volt-dep_KCNQ | Family |
| IPR003948 | K_chnl_volt-dep_KCNQ3 | Family |
| IPR005821 | Ion_trans_dom | Domain |
| IPR013821 | K_chnl_volt-dep_KCNQ_C | Domain |
| IPR020969 | Ankyrin-G_BS | Binding_site |
Pfam: PF00520, PF03520, PF11956
Catalyzed reactions (Rhea), 4 shown:
- K(+)(in) = K(+)(out) (RHEA:29463)
- Na(+)(in) = Na(+)(out) (RHEA:34963)
- Rb(+)(in) = Rb(+)(out) (RHEA:78547)
- Cs(+)(in) = Cs(+)(out) (RHEA:78555)
UniProt features (47 total): topological domain 8, sequence variant 8, transmembrane region 6, region of interest 4, compositionally biased region 4, binding site 3, mutagenesis site 3, modified residue 2, splice variant 2, sequence conflict 2, helix 2, chain 1, intramembrane region 1, short sequence motif 1
Structure
Experimental structures (PDB)
16 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5J03 | X-RAY DIFFRACTION | 2 |
| 22BJ | ELECTRON MICROSCOPY | 2.4 |
| 22BF | ELECTRON MICROSCOPY | 2.5 |
| 22BG | ELECTRON MICROSCOPY | 2.5 |
| 22BE | ELECTRON MICROSCOPY | 2.6 |
| 22BI | ELECTRON MICROSCOPY | 2.6 |
| 22AZ | ELECTRON MICROSCOPY | 2.7 |
| 22BK | ELECTRON MICROSCOPY | 2.7 |
| 22BC | ELECTRON MICROSCOPY | 2.8 |
| 22BH | ELECTRON MICROSCOPY | 2.8 |
| 22RJ | ELECTRON MICROSCOPY | 2.82 |
| 22BA | ELECTRON MICROSCOPY | 2.9 |
| 22RQ | ELECTRON MICROSCOPY | 2.9 |
| 22BD | ELECTRON MICROSCOPY | 3 |
| 9X5J | ELECTRON MICROSCOPY | 3.05 |
| 9X65 | ELECTRON MICROSCOPY | 3.19 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O43525-F1 | 57.50 | 0.15 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (3): 243; 259; 366
Post-translational modifications (2): 81, 246
Mutagenesis-validated functional residues (3):
| Position | Phenotype |
|---|---|
| 246 | no effect on current or expression. |
| 246 | abolishes currents without reducing channel protein expression. |
| 318 | >50% reduction of wt heteromeric current; ratio of 1:1 and 1:1:2. |
Function
Pathways and Gene Ontology
Reactome pathways
8 pathways
| ID | Pathway |
|---|---|
| R-HSA-1296072 | Voltage gated Potassium channels |
| R-HSA-445095 | Interaction between L1 and Ankyrins |
| R-HSA-112316 | Neuronal System |
| R-HSA-1266738 | Developmental Biology |
| R-HSA-1296071 | Potassium Channels |
| R-HSA-373760 | L1CAM interactions |
| R-HSA-422475 | Axon guidance |
| R-HSA-9675108 | Nervous system development |
MSigDB gene sets: 332 (showing top):
GOBP_POTASSIUM_ION_TRANSPORT, GOBP_MEMBRANE_DEPOLARIZATION, BENPORATH_ES_WITH_H3K27ME3, MODULE_274, GOBP_BEHAVIOR, REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS, GOBP_INTRACELLULAR_PROTEIN_TRANSPORT, GOBP_SENSORY_PERCEPTION_OF_MECHANICAL_STIMULUS, REACTOME_POTASSIUM_CHANNELS, ENK_UV_RESPONSE_KERATINOCYTE_UP, GOBP_NEURON_MATURATION, MODULE_45, MODULE_64, GOBP_PROTEIN_TARGETING, IVANOVA_HEMATOPOIESIS_LATE_PROGENITOR
GO Biological Process (34): protein targeting (GO:0006605), protein import into nucleus (GO:0006606), exocytosis (GO:0006887), endocytosis (GO:0006897), chemical synaptic transmission (GO:0007268), sensory perception of sound (GO:0007605), gene expression (GO:0010467), response to auditory stimulus (GO:0010996), neuron remodeling (GO:0016322), neuronal action potential (GO:0019228), nerve development (GO:0021675), psychomotor behavior (GO:0036343), regulation of synaptic plasticity (GO:0048167), neuron apoptotic process (GO:0051402), mitochondrial depolarization (GO:0051882), membrane hyperpolarization (GO:0060081), cellular response to calcium ion (GO:0071277), cellular response to xenobiotic stimulus (GO:0071466), potassium ion transmembrane transport (GO:0071805), apoptosome assembly (GO:0097314), excitatory chemical synaptic transmission (GO:0098976), inhibitory chemical synaptic transmission (GO:0098977), action potential initiation (GO:0099610), regulation of action potential firing threshold (GO:0099611), substantia propria of cornea development (GO:1903701), monoatomic ion transport (GO:0006811), potassium ion transport (GO:0006813), response to mechanical stimulus (GO:0009612), protein transport (GO:0015031), neuron differentiation (GO:0030182), monoatomic ion transmembrane transport (GO:0034220), establishment of localization in cell (GO:0051649), transmembrane transport (GO:0055085), protein-containing complex assembly (GO:0065003)
GO Molecular Function (7): voltage-gated potassium channel activity (GO:0005249), calmodulin binding (GO:0005516), voltage-gated monoatomic cation channel activity (GO:0022843), monoatomic ion channel activity (GO:0005216), voltage-gated monoatomic ion channel activity (GO:0005244), potassium channel activity (GO:0005267), protein binding (GO:0005515)
GO Cellular Component (9): mitochondrion (GO:0005739), plasma membrane (GO:0005886), voltage-gated potassium channel complex (GO:0008076), cell surface (GO:0009986), node of Ranvier (GO:0033268), axon initial segment (GO:0043194), synapse (GO:0045202), membrane (GO:0016020), monoatomic ion channel complex (GO:0034702)
Reactome top-level categories
Rollup of top-6 pathways:
| Category | Pathways |
|---|---|
| Potassium Channels | 1 |
| L1CAM interactions | 1 |
| Neuronal System | 1 |
| Axon guidance | 1 |
| Nervous system development | 1 |
| Developmental Biology | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| vesicle-mediated transport | 2 |
| monoatomic cation channel activity | 2 |
| main axon | 2 |
| establishment of protein localization | 1 |
| intracellular protein transport | 1 |
| protein localization to nucleus | 1 |
| import into nucleus | 1 |
| establishment of protein localization to organelle | 1 |
| secretion by cell | 1 |
| vesicle fusion to plasma membrane | 1 |
| vesicle budding from membrane | 1 |
| membrane invagination | 1 |
| import into cell | 1 |
| anterograde trans-synaptic signaling | 1 |
| sensory perception of mechanical stimulus | 1 |
| macromolecule biosynthetic process | 1 |
| response to mechanical stimulus | 1 |
| neuron maturation | 1 |
| action potential | 1 |
| transmission of nerve impulse | 1 |
| nervous system development | 1 |
| anatomical structure development | 1 |
| motor behavior | 1 |
| modulation of chemical synaptic transmission | 1 |
| regulation of biological quality | 1 |
| apoptotic process | 1 |
| mitochondrion | 1 |
| regulation of mitochondrial membrane potential | 1 |
| membrane depolarization | 1 |
| regulation of membrane potential | 1 |
| response to calcium ion | 1 |
| cellular response to metal ion | 1 |
| response to xenobiotic stimulus | 1 |
| cellular response to chemical stimulus | 1 |
| potassium ion transport | 1 |
| monoatomic cation transmembrane transport | 1 |
| protein-containing complex assembly | 1 |
| apoptotic signaling pathway | 1 |
| potassium channel activity | 1 |
Protein interactions and networks
STRING
2622 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| KCNQ3 | KCNQ5 | Q9NR82 | 984 |
| KCNQ3 | KCNQ2 | O43526 | 984 |
| KCNQ3 | ANK3 | Q12955 | 883 |
| KCNQ3 | KCNE1 | P15382 | 867 |
| KCNQ3 | CALM1 | P02593 | 791 |
| KCNQ3 | CALML3 | P27482 | 754 |
| KCNQ3 | CALML5 | Q9NZT1 | 754 |
| KCNQ3 | CALML6 | Q8TD86 | 745 |
| KCNQ3 | CALML4 | Q96GE6 | 745 |
| KCNQ3 | CHRNA4 | P43681 | 734 |
| KCNQ3 | SCN2A | Q99250 | 724 |
| KCNQ3 | SCN1A | P35498 | 722 |
| KCNQ3 | CSTB | P04080 | 675 |
| KCNQ3 | SCN8A | Q9UQD0 | 667 |
| KCNQ3 | KCNT1 | Q5JUK3 | 635 |
IntAct
2 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| KCNQ3 | AKT2 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (41): KCNQ2 (Affinity Capture-Western), KCNQ5 (Affinity Capture-Western), KCNQ3 (Affinity Capture-Western), SRXN1 (Affinity Capture-MS), TRAPPC9 (Affinity Capture-MS), TRAPPC4 (Affinity Capture-MS), TRAPPC6B (Affinity Capture-MS), WDR73 (Affinity Capture-MS), TRAPPC10 (Affinity Capture-MS), AKT2 (Affinity Capture-MS), KCNQ3 (Affinity Capture-MS), KCNQ3 (Positive Genetic), KCNQ3 (Affinity Capture-Western), KCNQ2 (Affinity Capture-Western), KCNQ3 (Affinity Capture-Western)
ESM2 similar proteins: A6H8H5, B1WAZ8, O18868, O43525, O43526, O54928, O70344, O75159, O88866, O88943, O88944, O95279, P15385, P15387, P19024, P22462, P51787, P56696, P57058, Q03717, Q14721, Q14B80, Q3UUF8, Q4ZHA6, Q5JV73, Q61762, Q62897, Q63099, Q68UT7, Q76N89, Q8K3F6, Q8K4P8, Q92831, Q92953, Q95167, Q95L11, Q96PR1, Q9JHD1, Q9JK45, Q9JK96
Diamond homologs: A4K2M4, A4K2N8, A4K2P6, A4K2Q6, A4K2R3, A4K2S2, A4K2T1, A4K2V2, A4K2W6, A4K2X4, A4K2Y2, A6H8H5, B2RQA1, G5EFC3, O15554, O18868, O35173, O35174, O43525, O43526, O70344, O73606, O73925, O88758, O88759, O88943, O88944, O89109, O97531, P08510, P0A333, P0A334, P10499, P15384, P15387, P16388, P16389, P16390, P17658, P17659
SIGNOR signaling
4 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| ezogabine | up-regulates | KCNQ3 | “chemical activation” |
| KCNQ3 | “up-regulates quantity” | potassium(1+) | relocalization |
| KCNQ3 | “up-regulates activity” | KCNQ2 | binding |
| KCNQ2 | “up-regulates activity” | KCNQ3 | binding |
Disease & clinical
Clinical variants and AI predictions
ClinVar
1489 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 26 |
| Likely pathogenic | 25 |
| Uncertain significance | 731 |
| Likely benign | 418 |
| Benign | 156 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1071385 | NC_000008.10:g.(?133141509)(133492779_?)del | Pathogenic |
| 1334436 | NM_004519.4(KCNQ3):c.989G>T (p.Arg330Leu) | Pathogenic |
| 1355934 | NM_004519.4(KCNQ3):c.802G>C (p.Gly268Arg) | Pathogenic |
| 1451762 | NM_004519.4(KCNQ3):c.1423del (p.Ala475fs) | Pathogenic |
| 1453259 | NM_004519.4(KCNQ3):c.1599del (p.Lys533fs) | Pathogenic |
| 1701059 | NM_004519.4(KCNQ3):c.509A>G (p.Glu170Gly) | Pathogenic |
| 2009234 | NM_004519.4(KCNQ3):c.893del (p.Glu298fs) | Pathogenic |
| 2134180 | NM_004519.4(KCNQ3):c.710T>A (p.Met237Lys) | Pathogenic |
| 21415 | NM_004519.4(KCNQ3):c.925T>C (p.Trp309Arg) | Pathogenic |
| 2705067 | NM_004519.4(KCNQ3):c.299_302del (p.Asn100fs) | Pathogenic |
| 2713298 | NM_004519.4(KCNQ3):c.115G>T (p.Glu39Ter) | Pathogenic |
| 2724292 | NM_004519.4(KCNQ3):c.1576C>T (p.Gln526Ter) | Pathogenic |
| 3655008 | NM_004519.4(KCNQ3):c.958G>A (p.Gly320Arg) | Pathogenic |
| 3725428 | NM_004519.4(KCNQ3):c.1048del (p.Ile350fs) | Pathogenic |
| 433110 | NM_004519.4(KCNQ3):c.1142C>T (p.Ala381Val) | Pathogenic |
| 449733 | NM_004519.4(KCNQ3):c.1060G>A (p.Gly354Arg) | Pathogenic |
| 4719410 | NM_004519.4(KCNQ3):c.61_77dup (p.Asn27fs) | Pathogenic |
| 4726206 | NM_004519.4(KCNQ3):c.1264C>T (p.Gln422Ter) | Pathogenic |
| 538551 | NM_004519.4(KCNQ3):c.1078C>T (p.Gln360Ter) | Pathogenic |
| 566195 | NM_004519.4(KCNQ3):c.1685dup (p.Tyr563fs) | Pathogenic |
| 656938 | NM_004519.4(KCNQ3):c.1090C>T (p.Arg364Cys) | Pathogenic |
| 7392 | NM_004519.4(KCNQ3):c.929G>T (p.Gly310Val) | Pathogenic |
| 839826 | NM_004519.4(KCNQ3):c.1220_1221del (p.Ser407fs) | Pathogenic |
| 841488 | NM_004519.4(KCNQ3):c.1722del (p.Gly575fs) | Pathogenic |
| 842150 | NM_004519.4(KCNQ3):c.61_77del (p.Gly20_Gly21insTer) | Pathogenic |
| 978934 | NM_004519.4(KCNQ3):c.688C>A (p.Arg230Ser) | Pathogenic |
| 1012603 | NM_004519.4(KCNQ3):c.938C>T (p.Thr313Ile) | Likely pathogenic |
| 1067197 | NM_004519.4(KCNQ3):c.929G>A (p.Gly310Asp) | Likely pathogenic |
| 1067624 | NM_004519.4(KCNQ3):c.1123G>A (p.Ala375Thr) | Likely pathogenic |
| 1176275 | NM_004519.4(KCNQ3):c.933G>A (p.Leu311=) | Likely pathogenic |
SpliceAI
4775 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 8:132129992:TGAAC:T | acceptor_gain | 1.0000 |
| 8:132129993:GAAC:G | acceptor_gain | 1.0000 |
| 8:132129995:AC:A | acceptor_gain | 1.0000 |
| 8:132129996:CC:C | acceptor_gain | 1.0000 |
| 8:132129997:C:CC | acceptor_gain | 1.0000 |
| 8:132132173:GACTT:G | donor_loss | 1.0000 |
| 8:132132174:ACTTA:A | donor_loss | 1.0000 |
| 8:132132175:CTTAC:C | donor_loss | 1.0000 |
| 8:132132176:TTA:T | donor_loss | 1.0000 |
| 8:132132177:TA:T | donor_loss | 1.0000 |
| 8:132132178:ACCT:A | donor_loss | 1.0000 |
| 8:132132179:C:CT | donor_loss | 1.0000 |
| 8:132132179:CCTGT:C | donor_gain | 1.0000 |
| 8:132132263:TCC:T | acceptor_loss | 1.0000 |
| 8:132132265:C:CA | acceptor_loss | 1.0000 |
| 8:132132266:T:C | acceptor_loss | 1.0000 |
| 8:132140070:CATTA:C | donor_loss | 1.0000 |
| 8:132140072:TTA:T | donor_loss | 1.0000 |
| 8:132140073:TACCT:T | donor_loss | 1.0000 |
| 8:132141123:CATTA:C | donor_loss | 1.0000 |
| 8:132141124:ATTAC:A | donor_loss | 1.0000 |
| 8:132141125:TTA:T | donor_loss | 1.0000 |
| 8:132141126:TACC:T | donor_loss | 1.0000 |
| 8:132141127:ACCT:A | donor_loss | 1.0000 |
| 8:132141128:C:G | donor_loss | 1.0000 |
| 8:132163466:A:AC | donor_gain | 1.0000 |
| 8:132163467:C:CC | donor_gain | 1.0000 |
| 8:132172690:TGCC:T | acceptor_gain | 1.0000 |
| 8:132172692:CC:C | acceptor_gain | 1.0000 |
| 8:132172692:CCCTG:C | acceptor_loss | 1.0000 |
AlphaMissense
5657 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 8:132137894:A:G | L564P | 1.000 |
| 8:132137912:A:G | L558P | 1.000 |
| 8:132137921:A:G | L555P | 1.000 |
| 8:132137925:G:C | H554D | 1.000 |
| 8:132137928:C:G | G553R | 1.000 |
| 8:132137928:C:T | G553R | 1.000 |
| 8:132137937:A:G | Y550H | 1.000 |
| 8:132137945:A:T | I547N | 1.000 |
| 8:132137984:A:G | F534S | 1.000 |
| 8:132170374:A:G | W399R | 1.000 |
| 8:132170374:A:T | W399R | 1.000 |
| 8:132170422:A:G | W383R | 1.000 |
| 8:132170422:A:T | W383R | 1.000 |
| 8:132172605:A:G | L378P | 1.000 |
| 8:132172614:G:T | A375D | 1.000 |
| 8:132172634:A:C | F368L | 1.000 |
| 8:132172634:A:T | F368L | 1.000 |
| 8:132172636:A:G | F368L | 1.000 |
| 8:132172639:G:C | H367D | 1.000 |
| 8:132172647:C:G | R364P | 1.000 |
| 8:132172648:G:T | R364S | 1.000 |
| 8:132172668:A:G | L357P | 1.000 |
| 8:132172668:A:T | L357H | 1.000 |
| 8:132172671:G:T | A356D | 1.000 |
| 8:132172683:C:T | G352E | 1.000 |
| 8:132172684:C:A | G352W | 1.000 |
| 8:132172684:C:G | G352R | 1.000 |
| 8:132172684:C:T | G352R | 1.000 |
| 8:132172692:C:T | G349D | 1.000 |
| 8:132172693:C:G | G349R | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000017239 (8:132397063 T>C), RS1000022543 (8:132241419 C>T), RS1000022761 (8:132392022 A>G), RS1000026151 (8:132357185 T>C), RS1000030581 (8:132226867 A>G), RS1000043380 (8:132412782 T>A), RS1000044089 (8:132432590 C>T), RS1000052359 (8:132314975 A>G), RS1000070316 (8:132185955 C>G), RS1000083910 (8:132351464 G>C), RS1000088858 (8:132179664 C>A), RS1000099645 (8:132471045 T>G), RS1000106702 (8:132242332 G>A,T), RS1000111675 (8:132412375 C>T), RS1000114395 (8:132478989 G>A,T)
Disease associations
OMIM: gene MIM:602232 | disease phenotypes: MIM:121200, MIM:121201, MIM:617080, MIM:606369, MIM:117100
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| seizures, benign familial neonatal, 2 | Strong | Autosomal dominant |
| benign neonatal seizures | Supportive | Autosomal dominant |
| benign familial infantile epilepsy | Supportive | Autosomal dominant |
| genetic developmental and epileptic encephalopathy | Limited | Autosomal recessive |
ClinGen Gene-Disease Validity (3)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| complex neurodevelopmental disorder | Definitive | AD |
| genetic developmental and epileptic encephalopathy | Limited | AR |
| self-limited familial neonatal epilepsy | Moderate | AD |
Mondo (11): benign neonatal seizures (MONDO:0016027), seizures, benign familial neonatal, 2 (MONDO:0007366), prostate cancer (MONDO:0008315), intellectual disability (MONDO:0001071), seizures, benign familial infantile, 5 (MONDO:0014903), Lennox-Gastaut syndrome (MONDO:0016532), neurodevelopmental disorder (MONDO:0700092), self-limited epilepsy with centrotemporal spikes (MONDO:0007295), autism spectrum disorder (MONDO:0005258), genetic developmental and epileptic encephalopathy (MONDO:0100062), benign familial infantile epilepsy (MONDO:0017615)
Orphanet (7): Self-limited neonatal epilepsy (Orphanet:1949), Familial prostate cancer (Orphanet:1331), Lennox-Gastaut syndrome (Orphanet:2382), Self-limited infantile epilepsy (Orphanet:306), Self-limited epilepsy with centrotemporal spikes (Orphanet:1945), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658), NON RARE IN EUROPE: Autism (Orphanet:106)
HPO phenotypes
54 total (30 of 54 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000153 | Abnormality of the mouth |
| HP:0000496 | Abnormality of eye movement |
| HP:0000718 | Aggressive behavior |
| HP:0000961 | Cyanosis |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001263 | Global developmental delay |
| HP:0001266 | Choreoathetosis |
| HP:0001276 | Hypertonia |
| HP:0001332 | Dystonia |
| HP:0002020 | Gastroesophageal reflux |
| HP:0002069 | Bilateral tonic-clonic seizure |
| HP:0002072 | Chorea |
| HP:0002104 | Apnea |
| HP:0002121 | Generalized non-motor (absence) seizure |
| HP:0002133 | Status epilepticus |
| HP:0002169 | Clonus |
| HP:0002197 | Generalized-onset seizure |
| HP:0002266 | Focal clonic seizure |
| HP:0002305 | Athetosis |
| HP:0002361 | Psychomotor deterioration |
| HP:0002372 | Normal interictal EEG |
| HP:0002373 | Febrile seizure (within the age range of 3 months to 6 years) |
| HP:0002384 | Focal impaired awareness seizure |
| HP:0002392 | EEG with polyspike wave complexes |
| HP:0003623 | Neonatal onset |
| HP:0004305 | Involuntary movements |
| HP:0007000 | Morning myoclonic jerks |
| HP:0007166 | Paroxysmal dyskinesia |
GWAS associations
5 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002097_19 | Coronary artery calcification | 8.000000e-06 |
| GCST002989_8 | LDL peak particle diameter (total fat intake interaction) | 1.000000e-06 |
| GCST005171_3 | QT interval | 2.000000e-06 |
| GCST008163_572 | Height | 2.000000e-06 |
| GCST008464_4 | Type 2 diabetes | 3.000000e-08 |
EFO canonical traits (4, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004723 | coronary artery calcification |
| EFO:0007677 | LDL peak particle diameter measurement |
| EFO:0007678 | total fat intake measurement |
| EFO:0004682 | QT interval |
MeSH disease descriptors (4)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D065768 | Lennox Gastaut Syndrome | C10.228.140.490.493.750; C16.320.495 |
| D065886 | Neurodevelopmental Disorders | F03.625 |
| D011471 | Prostatic Neoplasms | C04.588.945.440.770; C12.100.500.260.750; C12.100.500.565.625; C12.200.294.260.750; C12.200.294.565.625; C12.200.758.409.750; C12.900.619.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (6): CHEMBL2221348 (PROTEIN COMPLEX), CHEMBL2362996 (PROTEIN FAMILY), CHEMBL2363063 (PROTEIN FAMILY), CHEMBL2684 (SINGLE PROTEIN), CHEMBL3707192 (PROTEIN COMPLEX), CHEMBL3883311 (PROTEIN COMPLEX)
Molecules with ChEMBL bioactivity
3 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 9,776 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL255044 | FLUPIRTINE | 4 | 5,706 |
| CHEMBL41355 | EZOGABINE | 4 | 3,996 |
| CHEMBL266510 | FLINDOKALNER | 3 | 74 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs7818112 | KCNQ3 | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: vgic — Voltage-gated potassium channels (Kv)
Most potent curated ligand interactions (5 total), top 5:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| gabapentin | Activation | 8.28 | pEC50 |
| retigabine | Activator | 6.2 | pEC50 |
| JNJ-37822681 | Activation | 5.7 | pEC50 |
| linopirdine | Inhibitor | 5.4 | pIC50 |
| tetraethylammonium | Channel blocker | 1.5 | pIC50 |
Binding affinities (BindingDB)
13 measured of 15 human assays (15 total across all organisms); most potent 13 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| CHEMBL598553 | EC50 | 21 nM |
| CHEMBL599164 | EC50 | 25 nM |
| CHEMBL598126 | EC50 | 27 nM |
| CHEMBL604937 | EC50 | 28 nM |
| CHEMBL599781 | EC50 | 53 nM |
| CHEMBL596909 | EC50 | 91 nM |
| CHEMBL591203 | EC50 | 98 nM |
| CHEMBL603662 | EC50 | 160 nM |
| CHEMBL599365 | EC50 | 160 nM |
| CHEMBL603661 | EC50 | 380 nM |
| CHEMBL597329 | EC50 | 570 nM |
| CHEMBL603667 | EC50 | 2080 nM |
| CHEMBL603874 | EC50 | 2700 nM |
ChEMBL bioactivities
223 potent at pChembl≥5 of 241 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.82 | Ki | 0.15 | nM | CHEMBL5722941 |
| 9.74 | IC50 | 0.18 | nM | CHEMBL5722941 |
| 8.85 | EC50 | 1.4 | nM | CHEMBL6147947 |
| 8.25 | EC50 | 5.623 | nM | CHEMBL6148875 |
| 8.19 | EC50 | 6.457 | nM | CHEMBL6170048 |
| 8.02 | EC50 | 9.55 | nM | CHEMBL6143552 |
| 8.01 | EC50 | 9.8 | nM | CHEMBL5412763 |
| 8.00 | EC50 | 10 | nM | CHEMBL2047506 |
| 7.96 | EC50 | 10.96 | nM | CHEMBL6151161 |
| 7.95 | EC50 | 11.22 | nM | CHEMBL6162279 |
| 7.92 | EC50 | 12 | nM | CHEMBL6151161 |
| 7.92 | EC50 | 12.02 | nM | CHEMBL6151161 |
| 7.87 | EC50 | 13.49 | nM | CHEMBL6143040 |
| 7.77 | EC50 | 17 | nM | CHEMBL6150442 |
| 7.77 | EC50 | 16.98 | nM | CHEMBL6150442 |
| 7.75 | EC50 | 18 | nM | CHEMBL4458793 |
| 7.73 | EC50 | 18.62 | nM | CHEMBL6150563 |
| 7.73 | EC50 | 18.62 | nM | CHEMBL6164400 |
| 7.70 | EC50 | 20 | nM | CHEMBL4278049 |
| 7.68 | EC50 | 21 | nM | CHEMBL598553 |
| 7.64 | EC50 | 23 | nM | CHEMBL592297 |
| 7.62 | EC50 | 24 | nM | CHEMBL3621438 |
| 7.60 | EC50 | 25 | nM | CHEMBL599164 |
| 7.57 | EC50 | 26.92 | nM | CHEMBL6145412 |
| 7.57 | EC50 | 27 | nM | CHEMBL598126 |
| 7.55 | EC50 | 28.18 | nM | CHEMBL6150442 |
| 7.55 | EC50 | 28 | nM | CHEMBL604937 |
| 7.55 | EC50 | 28 | nM | CHEMBL599374 |
| 7.54 | EC50 | 29 | nM | CHEMBL589898 |
| 7.52 | EC50 | 30 | nM | CHEMBL2047511 |
| 7.43 | EC50 | 37 | nM | CHEMBL4093377 |
| 7.43 | EC50 | 37 | nM | CHEMBL4062193 |
| 7.42 | EC50 | 38.02 | nM | CHEMBL6144404 |
| 7.42 | EC50 | 38.02 | nM | CHEMBL6171400 |
| 7.40 | EC50 | 40 | nM | CHEMBL3621449 |
| 7.40 | EC50 | 40 | nM | CHEMBL4276984 |
| 7.40 | EC50 | 40 | nM | CHEMBL1703636 |
| 7.36 | EC50 | 44 | nM | CHEMBL609624 |
| 7.36 | EC50 | 44 | nM | CHEMBL591302 |
| 7.34 | EC50 | 45.71 | nM | CHEMBL6141883 |
| 7.31 | EC50 | 49 | nM | CHEMBL599376 |
| 7.30 | EC50 | 50 | nM | CHEMBL3621439 |
| 7.30 | EC50 | 50 | nM | CHEMBL4277250 |
| 7.30 | EC50 | 50 | nM | CHEMBL4549421 |
| 7.30 | EC50 | 50 | nM | CHEMBL4516269 |
| 7.28 | EC50 | 52.48 | nM | CHEMBL6168436 |
| 7.28 | EC50 | 53 | nM | CHEMBL599781 |
| 7.22 | EC50 | 60 | nM | CHEMBL5204124 |
| 7.22 | EC50 | 60 | nM | CHEMBL1689654 |
| 7.21 | EC50 | 62 | nM | CHEMBL3621440 |
PubChem BioAssay actives
183 with measured affinity, of 466 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 3-[(1R,2aS,4S,5aS,8aS,10S,11aR,14aS,16S,17aS,19S,20aS,22S,23aS,25S,26aS,28S,29aS,31R,32aS,35aS,36R,38aS,39S,41aS,42S,44aS,45S,48R,50aS,51S,53aS,54S,56aS,57S,59aS,60S,63S,66S,69S,72S,75S,78S,87R,93S,96S,99S)-17a,20a,23a,53a,63-pentakis(4-aminobutyl)-31-[[(2S)-2-[[(2S)-6-amino-2-[[(2S)-5-carbamimidamido-2-[[(2S)-5-carbamimidamido-2-[[(2S)-1-[(2S)-5-oxopyrrolidine-2-carbonyl]pyrrolidine-2-carbonyl]amino]pentanoyl]amino]pentanoyl]amino]hexanoyl]amino]-4-methylpentanoyl]amino]-16,29a,72,78-tetrakis(2-amino-2-oxoethyl)-14a,26a-bis(3-amino-3-oxopropyl)-2a,38a,66-tribenzyl-28,50a,57-tris[(2S)-butan-2-yl]-4,5a,19,42,45,69-hexakis(3-carbamimidamidopropyl)-51,54-bis(2-carboxyethyl)-56a,99-bis(carboxymethyl)-36-[[(2S,3S)-1-(carboxymethylamino)-3-methyl-1-oxopentan-2-yl]carbamoyl]-39,60-bis[(1R)-1-hydroxyethyl]-75,93-bis(hydroxymethyl)-32a,35a,59a-tris[(4-hydroxyphenyl)methyl]-22-(1H-imidazol-4-ylmethyl)-96-(1H-indol-3-ylmethyl)-41a-methyl-25-(2-methylpropyl)-1a,3,4a,6,7a,9,10a,13a,15,16a,18,19a,21,22a,24,25a,27,28a,30,31a,34a,37a,38,40a,41,43a,44,47,49a,50,52a,53,55a,56,58a,59,61a,62,65,68,71,74,77,80,83,86,89,92,95,98-pentacontaoxo-33,34,63a,64a,67a,68a-hexathia-a,2,3a,5,6a,8,9a,12a,14,15a,17,18a,20,21a,23,24a,26,27a,29,30a,33a,36a,37,39a,40,42a,43,46,48a,49,51a,52,54a,55,57a,58,60a,61,64,67,70,73,76,79,82,85,88,91,94,97-pentacontazapentacyclo[85.74.4.448,111.010,14.0144,148]nonahexacontahectan-8a-yl]propanoic acid | 2198828: Binding affinity to KV channel (unknown origin) assessed as inhibition constant | ki | 0.0001 | uM |
| N-[4-(2-bromo-6,7-dihydro-4H-thieno[3,2-c]pyridin-5-yl)-2,6-dimethylphenyl]-3,3-dimethylbutanamide | 2030288: Agonist activity at Kv7.2/Kv7.3 (unknown origin) expressed in human HEK293 cells by whole cell patch clamp assay | ec50 | 0.0098 | uM |
| N-(6-chloro-3-pyridinyl)-4-phenoxybenzamide | 669435: Agonist activity at KCNQ2/KCNQ3 expressed in CHO cells assessed as increase in KCl-induced 86Rb+ efflux incubated for 10 mins prior to KCl-induction by liquid scintillation counting | ec50 | 0.0100 | uM |
| cyclopropyl N-[2-amino-3-fluoro-4-[[4-(trifluoromethyl)phenyl]methylamino]phenyl]carbamate | 1861512: Agonist activity at Kv7.2/3 (unknown origin) expressed in CHO cells co-expressing GFP | ec50 | 0.0180 | uM |
| N-[(1R)-2-hydroxy-1-(3-methylsulfonylphenyl)ethyl]-5-(pentafluoro-lambda6-sulfanyl)-2-phenoxybenzamide | 1414246: Activation of human Kv7.2/7.3 by patch clamp method | ec50 | 0.0200 | uM |
| N-[(Z)-(5,6-difluoro-3-methyl-1,3-benzothiazol-2-ylidene)amino]adamantane-1-carboxamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0210 | uM |
| tert-butyl N-[(Z)-[3-methyl-6-(trifluoromethoxy)-1,3-benzothiazol-2-ylidene]amino]carbamate | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0230 | uM |
| N-(4,6-dimethoxy-2-thiomorpholin-4-ylpyrimidin-5-yl)-3,3-dimethylbutanamide | 1249421: Activation of human Kv7.2/7.3 expressed in CHOK1 cells | ec50 | 0.0240 | uM |
| N-[(Z)-[3-methyl-6-(trifluoromethoxy)-1,3-benzothiazol-2-ylidene]amino]adamantane-1-carboxamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0250 | uM |
| N-[(Z)-(3-methyl-1,3-benzothiazol-2-ylidene)amino]adamantane-1-carboxamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0270 | uM |
| N-[(Z)-(6-fluoro-3-methyl-1,3-benzothiazol-2-ylidene)amino]adamantane-1-carboxamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0280 | uM |
| N-[(Z)-[3-methyl-6-(trifluoromethoxy)-1,3-benzothiazol-2-ylidene]amino]cyclohexanecarboxamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0280 | uM |
| cyclopentyl N-[(Z)-[3-methyl-6-(trifluoromethoxy)-1,3-benzothiazol-2-ylidene]amino]carbamate | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0290 | uM |
| N-(6-chloro-3-pyridinyl)-3-fluoro-4-phenoxybenzamide | 669435: Agonist activity at KCNQ2/KCNQ3 expressed in CHO cells assessed as increase in KCl-induced 86Rb+ efflux incubated for 10 mins prior to KCl-induction by liquid scintillation counting | ec50 | 0.0300 | uM |
| N-(3,4-difluorophenyl)-6-(trifluoromethoxy)-1H-pyrazolo[4,3-b]pyridin-3-amine | 1454473: Activation of KCNQ2/3 (unknown origin) | ec50 | 0.0370 | uM |
| N-(6-chloro-3-pyridinyl)-6-(trifluoromethyl)-1H-indazol-3-amine | 1454473: Activation of KCNQ2/3 (unknown origin) | ec50 | 0.0370 | uM |
| 3-cyclopentyl-N-[4,6-dimethoxy-2-(4-methoxypiperidin-1-yl)pyrimidin-5-yl]propanamide | 1249421: Activation of human Kv7.2/7.3 expressed in CHOK1 cells | ec50 | 0.0400 | uM |
| N-[(1S)-1-(3-methylsulfonylphenyl)ethyl]-2-phenoxy-5-(trifluoromethyl)benzamide | 1414246: Activation of human Kv7.2/7.3 by patch clamp method | ec50 | 0.0400 | uM |
| N-(2,4,6-trimethylphenyl)bicyclo[2.2.1]heptane-2-carboxamide | 1414246: Activation of human Kv7.2/7.3 by patch clamp method | ec50 | 0.0400 | uM |
| 2-cyclopentyl-N-[(Z)-[3-methyl-6-(trifluoromethoxy)-1,3-benzothiazol-2-ylidene]amino]acetamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0440 | uM |
| 4-fluoro-N-[(Z)-[3-methyl-6-(trifluoromethoxy)-1,3-benzothiazol-2-ylidene]amino]benzamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0440 | uM |
| 3,3-dimethyl-N-[(Z)-[3-methyl-6-(trifluoromethoxy)-1,3-benzothiazol-2-ylidene]amino]butanamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0490 | uM |
| N-[2-(4,4-difluoropiperidin-1-yl)-4,6-dimethoxypyrimidin-5-yl]-3,3-dimethylbutanamide | 1249421: Activation of human Kv7.2/7.3 expressed in CHOK1 cells | ec50 | 0.0500 | uM |
| trans-(1S,2S)-5,5-difluoro-N-[(1R)-2-hydroxy-1-[3-(trifluoromethyl)phenyl]ethyl]-2-phenylcyclohexane-1-carboxamide | 1414246: Activation of human Kv7.2/7.3 by patch clamp method | ec50 | 0.0500 | uM |
| 3-cyclopentyl-N-[3-[4-(trifluoromethyl)phenyl]pyrazolo[1,5-a]pyrimidin-2-yl]propanamide | 1557153: Agonist activity at human KCNQ2/3 expressed in HEK293 cells by FLIPR based thallium influx assay | ec50 | 0.0500 | uM |
| N-[3-(4-fluoro-3-methylphenyl)-5,7-dimethylpyrazolo[1,5-a]pyrimidin-2-yl]-3,3-dimethylbutanamide | 1557153: Agonist activity at human KCNQ2/3 expressed in HEK293 cells by FLIPR based thallium influx assay | ec50 | 0.0500 | uM |
| N-[(Z)-[3-methyl-5-(trifluoromethyl)-1,3-benzothiazol-2-ylidene]amino]adamantane-1-carboxamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0530 | uM |
| N-[2-amino-3-fluoro-4-[[4-(trifluoromethyl)phenyl]methylamino]phenyl]-3,3-dimethylbutanamide | 1874639: Activation of Kv7.2/Kv7.3 channel (unknown origin) expressed in CHO cells assessed as maximum current density measured after 24 hrs by whole cell patch clamp based electrophysiological method | ec50 | 0.0600 | uM |
| 5-(2,6-dichloro-5-fluoro-3-pyridinyl)-3-phenyl-2-(trifluoromethyl)-1H-pyrazolo[1,5-a]pyrimidin-7-one | 587711: Activation of KCNQ2/Q3 expressed in CHO cells by atomic absorption Rb’+ efflux assay | ec50 | 0.0600 | uM |
| N-[4,6-dimethoxy-2-(1,4-oxazepan-4-yl)pyrimidin-5-yl]-3,3-dimethylbutanamide | 1249421: Activation of human Kv7.2/7.3 expressed in CHOK1 cells | ec50 | 0.0620 | uM |
| N-[(Z)-[3-methyl-6-(trifluoromethoxy)-1,3-benzothiazol-2-ylidene]amino]cyclopentanecarboxamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0620 | uM |
| N-(4,6-dimethoxy-2-piperidin-1-ylpyrimidin-5-yl)-3,3-dimethylbutanamide | 1249421: Activation of human Kv7.2/7.3 expressed in CHOK1 cells | ec50 | 0.0640 | uM |
| 2-cyclopentyl-N-[3-(4-fluoro-3-methylphenyl)-5,7-dimethylpyrazolo[1,5-a]pyrimidin-2-yl]acetamide | 1557153: Agonist activity at human KCNQ2/3 expressed in HEK293 cells by FLIPR based thallium influx assay | ec50 | 0.0700 | uM |
| 3-cyclopentyl-N-[3-(4-fluoro-3-methylphenyl)-5,7-dimethylpyrazolo[1,5-a]pyrimidin-2-yl]propanamide | 1557153: Agonist activity at human KCNQ2/3 expressed in HEK293 cells by FLIPR based thallium influx assay | ec50 | 0.0700 | uM |
| N-(6-chloro-3-pyridinyl)-3-fluoro-4-(4-fluorophenyl)sulfonylbenzamide | 669435: Agonist activity at KCNQ2/KCNQ3 expressed in CHO cells assessed as increase in KCl-induced 86Rb+ efflux incubated for 10 mins prior to KCl-induction by liquid scintillation counting | ec50 | 0.0700 | uM |
| N-[(3-methylsulfonylphenyl)methyl]-5-(pentafluoro-lambda6-sulfanyl)-2-phenoxybenzamide | 1414246: Activation of human Kv7.2/7.3 by patch clamp method | ec50 | 0.0800 | uM |
| N-[(1R)-2-hydroxy-1-(3-methylsulfonylphenyl)ethyl]-2-phenoxy-5-(trifluoromethyl)benzamide | 1414246: Activation of human Kv7.2/7.3 by patch clamp method | ec50 | 0.0800 | uM |
| 3-cyclopentyl-N-[3-(4-fluoro-3-methylphenyl)-6-methylpyrazolo[1,5-a]pyrimidin-2-yl]propanamide | 1557153: Agonist activity at human KCNQ2/3 expressed in HEK293 cells by FLIPR based thallium influx assay | ec50 | 0.0800 | uM |
| N-(6-chloro-3-pyridinyl)-3-fluoro-4-(4-fluorophenyl)sulfanylbenzamide | 669435: Agonist activity at KCNQ2/KCNQ3 expressed in CHO cells assessed as increase in KCl-induced 86Rb+ efflux incubated for 10 mins prior to KCl-induction by liquid scintillation counting | ec50 | 0.0800 | uM |
| 4-chloro-N-(6-chloro-3-pyridinyl)-3-fluorobenzamide | 669435: Agonist activity at KCNQ2/KCNQ3 expressed in CHO cells assessed as increase in KCl-induced 86Rb+ efflux incubated for 10 mins prior to KCl-induction by liquid scintillation counting | ec50 | 0.0800 | uM |
| N-[(Z)-[3-methyl-4-(trifluoromethyl)-1,3-benzothiazol-2-ylidene]amino]adamantane-1-carboxamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0910 | uM |
| propan-2-yl N-[(Z)-[3-methyl-6-(trifluoromethoxy)-1,3-benzothiazol-2-ylidene]amino]carbamate | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0950 | uM |
| N-[(Z)-(7-fluoro-3-methyl-1,3-benzothiazol-2-ylidene)amino]adamantane-1-carboxamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.0980 | uM |
| trans-(1S,2S)-N-[(1R)-1-(3-chlorophenyl)-2-hydroxyethyl]-5,5-difluoro-2-phenylcyclohexane-1-carboxamide | 1414246: Activation of human Kv7.2/7.3 by patch clamp method | ec50 | 0.1000 | uM |
| 3-fluoro-N-[(Z)-[3-methyl-6-(trifluoromethoxy)-1,3-benzothiazol-2-ylidene]amino]benzamide | 461899: Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | ec50 | 0.1000 | uM |
| 2-cyclopentyl-N-[3-[(4-fluorophenyl)methyl]-6-methylpyrazolo[1,5-a]pyrimidin-2-yl]acetamide | 689724: Activation of KCNQ2/Q3 | ec50 | 0.1000 | uM |
| N-[2-(3,3-difluoroazetidin-1-yl)-4,6-dimethoxypyrimidin-5-yl]-3,3-dimethylbutanamide | 1249421: Activation of human Kv7.2/7.3 expressed in CHOK1 cells | ec50 | 0.1100 | uM |
| N-(6-chloro-3-pyridinyl)-3-fluoro-4-propan-2-ylsulfanylbenzamide | 669435: Agonist activity at KCNQ2/KCNQ3 expressed in CHO cells assessed as increase in KCl-induced 86Rb+ efflux incubated for 10 mins prior to KCl-induction by liquid scintillation counting | ec50 | 0.1100 | uM |
| (2S)-2-phenyl-N-(2-pyrrolidin-1-ylphenyl)butanamide | 697779: Antagonist activity at KCNQ2/Q3 expressed in CHO cells incubated for 3 mins by automated patch clamp assay | ic50 | 0.1200 | uM |
| 4,5-difluoro-N-[(1S)-1-(3-methylsulfonylphenyl)ethyl]-2-phenoxybenzamide | 1414246: Activation of human Kv7.2/7.3 by patch clamp method | ec50 | 0.1300 | uM |
CTD chemical–gene interactions
35 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | increases expression, increases methylation | 2 |
| Aflatoxin B1 | decreases methylation, increases methylation | 2 |
| 2,5,2’,5’-tetrachlorobiphenyl | increases expression, decreases expression | 1 |
| ethyl-p-hydroxybenzoate | decreases expression | 1 |
| sulforaphane | decreases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| aflatoxin B2 | increases methylation | 1 |
| CGP 52608 | increases reaction, affects binding | 1 |
| perfluoro-n-nonanoic acid | increases expression | 1 |
| ezogabine | decreases response to substance, affects activity | 1 |
| N-(1-(3-morpholin-4-ylphenyl)ethyl)-3-phenylacrylamide | affects activity, affects binding | 1 |
| abrine | increases expression | 1 |
| jinfukang | affects cotreatment, decreases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Resveratrol | affects cotreatment, decreases expression | 1 |
| Sunitinib | increases expression | 1 |
| Arsenic | affects methylation | 1 |
| Benzimidazoles | affects binding, increases activity, increases import | 1 |
| Cisplatin | affects cotreatment, decreases expression | 1 |
| Doxorubicin | decreases expression | 1 |
| Histamine | affects cotreatment, decreases activity, decreases reaction | 1 |
| Methapyrilene | increases methylation | 1 |
| Plant Extracts | affects cotreatment, decreases expression | 1 |
| Smoke | decreases expression | 1 |
| Thallium | affects binding, increases activity, increases import | 1 |
| Triclosan | decreases expression | 1 |
| Valproic Acid | increases expression | 1 |
| Vanadium | increases expression | 1 |
| Cyclosporine | decreases methylation | 1 |
| Astemizole | affects cotreatment, decreases activity, decreases reaction | 1 |
ChEMBL screening assays
97 unique, capped per target: 91 binding, 4 functional, 1 admet, 1 toxicity
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1070909 | Binding | Activation of KCNQ2/KCNQ3 expressed in CHO cells by isotopic efflux assay | Novel KCNQ2/Q3 agonists as potential therapeutics for epilepsy and neuropathic pain. — J Med Chem |
| CHEMBL2050726 | Functional | Agonist activity at KCNQ2/KCNQ3 expressed in CHO cells assessed as increase in KCl-induced 86Rb+ efflux incubated for 10 mins prior to KCl-induction by liquid scintillation counting | N-Pyridyl and Pyrimidine Benzamides as KCNQ2/Q3 Potassium Channel Openers for the Treatment of Epilepsy. — ACS Med Chem Lett |
| CHEMBL4385400 | ADMET | Agonist activity at KCNQ2/KCNQ3 (unknown origin) expressed in CHOK1 cells assessed as increase in amplitude of outward current at 10 uM by whole cell patch clamp assay relative to control | Discovery of Novel Retigabine Derivatives as Potent KCNQ4 and KCNQ5 Channel Agonists with Improved Specificity. — ACS Med Chem Lett |
Cellosaurus cell lines
5 cell lines: 2 induced pluripotent stem cell, 2 spontaneously immortalized cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_A6XR | UNINAi001-A | Induced pluripotent stem cell | Male |
| CVCL_A6XS | UNINAi001-B | Induced pluripotent stem cell | Male |
| CVCL_C0Y7 | B’SYS CHO Kv7.2/3 | Spontaneously immortalized cell line | Female |
| CVCL_D1KA | PrecisION hKv7.2/Kv7.3-CHO | Spontaneously immortalized cell line | Female |
| CVCL_D1KB | PrecisION hKv7.3/Kv7.5-HEK | Transformed cell line | Female |
Clinical trials (associated diseases)
312 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00029224 | PHASE4 | COMPLETED | Treatment With Zoledronic Acid in Patients With Breast Cancer, Multiple Myeloma, and Prostate Cancer With Cancer Related Bone Lesions |
| NCT00035997 | PHASE4 | COMPLETED | Open-label Trial on the Effect of I.V. Zoledronic Acid 4 mg on Bone Density in Hormone Sensitive Prostate Cancer Patients With Bone Metastasis |
| NCT00063609 | PHASE4 | COMPLETED | The Effect of Zoledronic Acid on Bone Loss in Prostate Cancer Patients Undergoing Androgen Deprivation Therapy |
| NCT00103623 | PHASE4 | SUSPENDED | The Plenaxis® Experience Study |
| NCT00106392 | PHASE4 | COMPLETED | A Safety and Efficacy Study of Prograf in the Prevention of Erectile Dysfunction After Radical Prostatectomy |
| NCT00185029 | PHASE4 | UNKNOWN | MR-Lymphography and Lymph Node Staging in Prostate Cancer |
| NCT00199485 | PHASE4 | COMPLETED | Angelica Sinensis for the Treatment of Hot Flashes in Men Undergoing LHRH Therapy for Prostate Cancer |
| NCT00219219 | PHASE4 | COMPLETED | Zoledronic Acid in the Prevention of Skeletal-related Events in Hormone Refractory and Hormone-sensitive Prostate Cancer Patients With Bone Metastases |
| NCT00219271 | PHASE4 | COMPLETED | Effect Of Zoledronic Acid On Circulating And Bone Marrow-Residing Prostate Cancer Cells In Patients With Clinically Localized Prostate Cancer |
| NCT00237146 | PHASE4 | COMPLETED | Study to Evaluate Zoledronic Acid on Quality of Life and Skeletal-related Events as Adjuvant Treatment in Patients With Hormone-naïve Prostate Cancer and Bone Metastasis Who Have Undergone Orchiectomy |
| NCT00242554 | PHASE4 | COMPLETED | Open-label Phase IV Clinical Trial to Evaluate the Safety and Tolerability of Zoledronic Acid in Patients With Prostate Cancer and Bone Metastases |
| NCT00280098 | PHASE4 | COMPLETED | Docetaxel in the Treatment of Hormone Refractory Prostate Cancer |
| NCT00293696 | PHASE4 | COMPLETED | Casodex/Zoladex Biomarkers in Localised Prostate Cancer |
| NCT00334139 | PHASE4 | COMPLETED | Effect of Zoledronic Acid on Bone Metabolism in Patients With Bone Metastasis and Prostate or Breast Cancer |
| NCT00375765 | PHASE4 | COMPLETED | Effects On Dihydrotestosterone Regulated Gene Expression In Benign Prostatic Hyperplasia Or Prostate Cancer |
| NCT00391690 | PHASE4 | COMPLETED | Evaluation of Bone Markers as Diagnostic Tools for Early Detection of Bone Metastases in Patients With High Risk Prostate Cancer |
| NCT00422708 | PHASE4 | COMPLETED | Local Anesthesia for Prostate Biopsy |
| NCT00526331 | PHASE4 | COMPLETED | Evaluation of Arterial Pressure Based Cardiac Output for Goal-Directed Perioperative Therapy |
| NCT00590213 | PHASE4 | COMPLETED | Compare the Value of Prophylactic Versus Therapeutic Breast Radiotherapy in CASODEX |
| NCT00629330 | PHASE4 | TERMINATED | Dissemination of Prostate Cancer Screening to PCP’s in African American Communities |
| NCT00771966 | PHASE4 | COMPLETED | Radical Prostatectomy and Perioperative Fluid Therapy |
| NCT00805701 | PHASE4 | COMPLETED | Study Assessing The Efficacy And Safety Of Avodart (Dutasteride) At Improving Urinary Symptoms In Men With Prostate Cancer Who Are Undergoing Seed Implantation |
| NCT00859027 | PHASE4 | COMPLETED | Effect Of Risedronate On Bone Mass In Older Men Receiving Neoadjuvant Therapy For Prostate Cancer |
| NCT00906269 | PHASE4 | UNKNOWN | Can Hyperbaric Oxygen Improve Erectile Function Following Surgery for Prostate Cancer |
| NCT00953277 | PHASE4 | COMPLETED | Study of Nerve Reconstruction Using AVANCE in Subjects Who Undergo Robotic Assisted Prostatectomy for Treatment of Prostate Cancer |
| NCT00982800 | PHASE4 | COMPLETED | Does Postoperative Gabapentin Reduce Pain, Opioid Consumption and Anxiety and Have a Positive Effect on Health Related Quality of Life After Radical Prostatectomy? |
| NCT01083199 | PHASE4 | COMPLETED | Global Performance Evaluation of the AMS CONTINUUM™ Device |
| NCT01136226 | PHASE4 | COMPLETED | Evaluate Recovery of Testosterone for Patients Using Eligard |
| NCT01161563 | PHASE4 | COMPLETED | Randomized Crossover Trial to Assess the Tolerability of Gonadotropin Releasing Hormone (GnRH) Analogue Administration |
| NCT01230905 | PHASE4 | COMPLETED | Study to Monitor the Effects of Androgen Suppression Treatment on the Heart |
| NCT01296672 | PHASE4 | COMPLETED | 3 Month Finasteride Challenge Test Can Significantly Improve the Performance of Screening for Prostate Cancer |
| NCT01365143 | PHASE4 | TERMINATED | Prospective Randomized Trial Comparing Robotic Versus Open Radical Prostatectomy |
| NCT01379742 | PHASE4 | UNKNOWN | Comparison of Between ThinSeed™ and OncoSeed™ for Permanent Prostate Brachytherapy |
| NCT01486563 | PHASE4 | COMPLETED | Hydroxyethyl Starch and Renal Function After Radical Prostatectomy |
| NCT01511874 | PHASE4 | COMPLETED | Efficacy and Safety Study of ELIGARD 22.5mg With Prostate Cancer |
| NCT01512472 | PHASE4 | TERMINATED | Firmagon (Degarelix) Intermittent Therapy |
| NCT01547416 | PHASE4 | COMPLETED | The Effect of Combined General/Epidural Anesthesia Versus General Anesthesia on Diaphragmatic Function |
| NCT01571544 | PHASE4 | COMPLETED | The Use of Thermal Suits as Preventing Hypothermia During Surgery |
| NCT01581749 | PHASE4 | UNKNOWN | Evaluation of Truebeam for Low-Intermediate Risk Prostate Cancer |
| NCT01649635 | PHASE4 | COMPLETED | Study of Cabazitaxel Combined With Prednisone and Prophylaxis of Neutropenia Complications in the Treatment of Patients With Metastatic Castration-resistant Prostate Cancer |
Related Atlas pages
- Associated diseases: genetic developmental and epileptic encephalopathy, seizures, benign familial neonatal, 2, benign neonatal seizures, benign familial infantile epilepsy, complex neurodevelopmental disorder
- Targeted by drugs: Azetukalner, Ezogabine, Gabapentin
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): benign familial infantile epilepsy, benign neonatal seizures, genetic developmental and epileptic encephalopathy, Lennox-Gastaut syndrome, seizures, benign familial infantile, 5, seizures, benign familial neonatal, 2, self-limited epilepsy with centrotemporal spikes