KCTD13-DT

Summary

KCTD13-DT (KCTD13 divergent transcript, HGNC:55585) is a long non-coding RNA gene on chromosome 16p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55585
Approved symbol	KCTD13-DT
Name	KCTD13 divergent transcript
Location	16p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000247735
Ensembl biotype	lncRNA
Entrez	107984836
RNAcentral	URS000038D5CE — lncRNA, 1762 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000450909

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000450909 — 2 exons

Exon	Start	End
ENSE00001544563	29928268	29928933
ENSE00001965139	29926836	29927931

Expression profiles

Bgee: expression breadth ubiquitous, 151 present calls, max score 84.50.

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	84.50	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	72.59	gold quality
pancreatic ductal cell	CL:0002079	72.43	silver quality
bone marrow cell	CL:0002092	70.01	silver quality
islet of Langerhans	UBERON:0000006	66.71	gold quality
stromal cell of endometrium	CL:0002255	65.87	gold quality
ganglionic eminence	UBERON:0004023	65.21	gold quality
colonic epithelium	UBERON:0000397	63.94	silver quality
ventricular zone	UBERON:0003053	62.82	gold quality
cortical plate	UBERON:0005343	60.26	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.41	gold quality
monocyte	CL:0000576	57.65	gold quality
leukocyte	CL:0000738	57.04	gold quality
prefrontal cortex	UBERON:0000451	56.13	gold quality
ileal mucosa	UBERON:0000331	55.97	silver quality
pancreas	UBERON:0001264	55.79	gold quality
left adrenal gland	UBERON:0001234	55.49	gold quality
right uterine tube	UBERON:0001302	55.28	gold quality
right adrenal gland	UBERON:0001233	55.16	gold quality
endothelial cell	CL:0000115	55.03	gold quality
left adrenal gland cortex	UBERON:0035825	54.99	gold quality
smooth muscle tissue	UBERON:0001135	54.79	gold quality
right adrenal gland cortex	UBERON:0035827	54.66	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
adrenal gland	UBERON:0002369	54.24	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
rectum	UBERON:0001052	54.00	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
adrenal cortex	UBERON:0001235	53.85	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.26

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.