KIF18B

gene
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Summary

KIF18B (kinesin family member 18B, HGNC:27102) is a protein-coding gene on chromosome 17q21.31, encoding Kinesin-like protein KIF18B (Q86Y91). In complex with KIF2C, constitutes the major microtubule plus-end depolymerizing activity in mitotic cells. It is a selective cancer dependency (DepMap: 36.3% of cell lines).

Enables cytoskeletal motor activity and kinesin binding activity. Involved in microtubule depolymerization; mitotic cell cycle; and regulation of cell division. Located in cytosol; microtubule; and nuclear lumen.

Source: NCBI Gene 146909 — RefSeq curated summary.

At a glance

  • GWAS associations: 3
  • Clinical variants (ClinVar): 17 total
  • Druggable target: yes — 1 molecules with ChEMBL bioactivity
  • Cancer dependency (DepMap): dependent in 36.3% of screened cell lines
  • MANE Select transcript: NM_001265577

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:27102
Approved symbolKIF18B
Namekinesin family member 18B
Location17q21.31
Locus typegene with protein product
StatusApproved
Ensembl geneENSG00000186185
Ensembl biotypeprotein_coding
OMIM614570
Entrez146909

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 7 protein_coding, 1 retained_intron

ENST00000585687, ENST00000587309, ENST00000590129, ENST00000593135, ENST00000914031, ENST00000914032, ENST00000914033, ENST00000914034

RefSeq mRNA: 2 — MANE Select: NM_001265577 NM_001264573, NM_001265577

CCDS: CCDS45709, CCDS58555

Canonical transcript exons

ENST00000593135 — 16 exons

ExonStartEnd
ENSE000013334324492698944927078
ENSE000013334354492802644928578
ENSE000013334384492881944929024
ENSE000013334424493160244931729
ENSE000013461324492641444926499
ENSE000013731354493483144934935
ENSE000013739294493423344934430
ENSE000013754044493603244936358
ENSE000013791104493525944935416
ENSE000013805394493450744934617
ENSE000013873094493392344934099
ENSE000015586864493267344932773
ENSE000028288214492471144926186
ENSE000029053194493205644932206
ENSE000029365734494762844947773
ENSE000034997734493291244932986

Expression profiles

Bgee: expression breadth ubiquitous, 186 present calls, max score 89.46.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 7.4970 / max 69.1848, expressed in 1218 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter IDTPM avgSamples expressed
1664806.95381154
1664790.3427185
1664780.200469

Top tissues by expression

272 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
trabecular bone tissueUBERON:000248389.46gold quality
ventricular zoneUBERON:000305389.44gold quality
cervix squamous epitheliumUBERON:000692287.94silver quality
esophagus squamous epitheliumUBERON:000692085.01gold quality
secondary oocyteCL:000065584.80gold quality
embryoUBERON:000092284.76gold quality
squamous epitheliumUBERON:000691484.51gold quality
oocyteCL:000002383.39gold quality
epithelium of esophagusUBERON:000197682.86gold quality
thymusUBERON:000237082.76gold quality
ganglionic eminenceUBERON:000402382.48gold quality
gingival epitheliumUBERON:000194981.98silver quality
lower esophagus mucosaUBERON:003583480.26gold quality
bone marrowUBERON:000237180.07gold quality
mucosa of transverse colonUBERON:000499180.00gold quality
gingivaUBERON:000182878.47silver quality
hair follicleUBERON:000207377.57silver quality
primordial germ cell in gonadCL:0000670 ∩ UBERON:000099177.29gold quality
stromal cell of endometriumCL:000225577.07gold quality
bone marrow cellCL:000209276.69silver quality
tibiaUBERON:000097975.96gold quality
esophagus mucosaUBERON:000246975.51gold quality
oral cavityUBERON:000016774.79gold quality
vermiform appendixUBERON:000115474.57gold quality
epithelium of nasopharynxUBERON:000195174.55silver quality
tongue squamous epitheliumUBERON:000691974.52gold quality
male germ line stem cell (sensu Vertebrata) in testisCL:0000089 ∩ UBERON:000047374.40gold quality
amniotic fluidUBERON:000017373.05silver quality
cartilage tissueUBERON:000241872.81silver quality
caecumUBERON:000115370.65gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 2.

ExperimentMarker?Max mean expression
E-MTAB-6678yes9.90
E-ANND-3yes3.99

Regulation

Is transcription factor: no

Functional genomics

DepMap (CRISPR cell-line fitness): dependent in 36.3% of screened cell lines.

Literature-anchored findings (GeneRIF, showing 23)

  • the expression of KIF18B is regulated in a cell cycle-dependent manner and therefore may play an important role(s) in cell division. (PMID:20600703)
  • Kif18B is a new microtubule dynamics regulatory protein that interacts with EB1 to control astral microtubule length (PMID:21737685)
  • Results uncover a novel role for Aurora A/B kinases in regulating spindle MT dynamics through Kif18b-MCAK and suggest that the Kif18b-MCAK complex constitutes the major MT plus-end depolymerizing activity in mitotic cells. (PMID:21820309)
  • High KIF18B expression is associated with neoplasms. (PMID:25236463)
  • Kif18B is only modestly processive and that the motor switches frequently between directed and diffusive modes of motility. (PMID:26150501)
  • we demonstrate that Kif18b shortens microtubules by increasing the catastrophe rate of dynamic microtubules. Overall, our work reveals that Kif18b uses its motile properties to reach microtubule ends, where it regulates astral microtubule length to ensure spindle centering. (PMID:29661912)
  • Bioinformatics Analysis Suggests the Combined Expression of AURKB and KIF18B Being an Important Event in the Development of Clear Cell Renal Cell Carcinoma. (PMID:31489573)
  • KIF18B is highly expressed in cutaneous melanoma and this overexpression is correlated with a worse prognosis. (PMID:31617652)
  • KIF18B might promote lung adenocarcinoma cell proliferation, migration, and invasion by activating Rac1 and mediating the AKT/mTOR signaling pathway. (PMID:31759406)
  • KIF18B promotes the proliferation of pancreatic ductal adenocarcinoma via activating the expression of CDCA8. (PMID:31875977)
  • KIF18B promotes hepatocellular carcinoma progression through activating Wnt/beta-catenin-signaling pathway. (PMID:32052444)
  • Role of kif2c, A Gene Related to ALL Relapse, in Embryonic Hematopoiesis in Zebrafish. (PMID:32354205)
  • KIF18B promotes tumor progression in osteosarcoma by activating beta-catenin. (PMID:32587775)
  • Silencing KIF18B enhances radiosensitivity: identification of a promising therapeutic target in sarcoma. (PMID:33038765)
  • Kinesin family member 18B regulates the proliferation and invasion of human prostate cancer cells. (PMID:33753726)
  • Silencing of KIF18B restricts proliferation and invasion and enhances the chemosensitivity of breast cancer via modulating Akt/GSK-3beta/beta-catenin pathway. (PMID:34058791)
  • The nuclear kinesin KIF18B promotes 53BP1-mediated DNA double-strand break repair. (PMID:34192545)
  • KIF18B as a regulator in tumor microenvironment accelerates tumor progression and triggers poor outcome in hepatocellular carcinoma. (PMID:34217812)
  • KIF18b-dependent hypomethylation of PARPBP gene promoter enhances oxaliplatin resistance in colorectal cancer. (PMID:34508743)
  • miR-139-3p/Kinesin family member 18B axis suppresses malignant progression of gastric cancer. (PMID:35137670)
  • Upregulation of KIF18B facilitates malignant phenotype of esophageal squamous cell carcinoma by activating CDCA8/mTORC1 pathway. (PMID:36085568)
  • Kinesin Family Member B18 Is Related to Gastric Mucin Phenotype and Contributes to Gastric Cancer Progression by Regulating Epithelial-Mesenchymal Transition. (PMID:37812924)
  • Differential Expression of KIF18B in Gastric Cancer and Its Role in Chemotherapy Sensitivity. (PMID:38305287)

Cross-species orthologs

2 orthologs

OrganismSymbolGene ID
mus_musculusKif18bENSMUSG00000051378
rattus_norvegicusKif18bENSRNOG00000021713

Paralogs (41): KIF1B (ENSG00000054523), KIF26A (ENSG00000066735), KIF2A (ENSG00000068796), KIF22 (ENSG00000079616), KIF3C (ENSG00000084731), KIF9 (ENSG00000088727), KIF16B (ENSG00000089177), KIF4A (ENSG00000090889), KIF3B (ENSG00000101350), KIF20A (ENSG00000112984), KIF21B (ENSG00000116852), KIF17 (ENSG00000117245), KIF14 (ENSG00000118193), KIF18A (ENSG00000121621), KIF25 (ENSG00000125337), KIF1C (ENSG00000129250), KIF1A (ENSG00000130294), KIF3A (ENSG00000131437), KIF12 (ENSG00000136883), KIF13A (ENSG00000137177), KIF23 (ENSG00000137807), KIF11 (ENSG00000138160), CENPE (ENSG00000138778), KIF21A (ENSG00000139116), KIFC3 (ENSG00000140859), KIF2B (ENSG00000141200), KIF2C (ENSG00000142945), KIF5A (ENSG00000155980), KIF26B (ENSG00000162849), KIF15 (ENSG00000163808), KIF6 (ENSG00000164627), KIF27 (ENSG00000165115), KIF7 (ENSG00000166813), KIFC2 (ENSG00000167702), KIF5C (ENSG00000168280), KIF5B (ENSG00000170759), KIF24 (ENSG00000186638), KIF19 (ENSG00000196169), KIF13B (ENSG00000197892), KIF4B (ENSG00000226650)

Protein

Protein identifiers

Kinesin-like protein KIF18BQ86Y91 (reviewed: Q86Y91)

All UniProt accessions (2): A0A494BYR6, Q86Y91

UniProt curated annotations — full annotation on UniProt →

Function. In complex with KIF2C, constitutes the major microtubule plus-end depolymerizing activity in mitotic cells. Its major role may be to transport KIF2C and/or MAPRE1 along microtubules.

Subunit / interactions. Interacts with MAPRE1; this interaction is required for efficient accumulation at microtubule plus ends. Interacts with KIF2C at microtubule tips; this interaction increases the affinity of both partners for microtubule plus ends and is required for robust microtubule depolymerization. KIF2C phosphorylation by AURKA or AURKB strongly reduces KIF18B-binding.

Subcellular location. Nucleus. Cytoplasm. Cytoskeleton.

Tissue specificity. Shows a prominent expression in the amygdala.

Similarity. Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.

Isoforms (2)

UniProt IDNamesCanonical?
Q86Y91-51yes
Q86Y91-62

RefSeq proteins (2): NP_001251503, NP_001252506* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR001752Kinesin_motor_domDomain
IPR019821Kinesin_motor_CSConserved_site
IPR027417P-loop_NTPaseHomologous_superfamily
IPR027640Kinesin-like_famFamily
IPR036961Kinesin_motor_dom_sfHomologous_superfamily

Pfam: PF00225

UniProt features (31 total): modified residue 10, region of interest 6, short sequence motif 4, compositionally biased region 3, splice variant 3, chain 1, domain 1, binding site 1, sequence variant 1, coiled-coil region 1

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q86Y91-F162.960.31

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Ligand- & substrate-binding residues (1): 109–116

Post-translational modifications (10): 404, 417, 452, 480, 558, 633, 639, 662, 674, 822

Function

Pathways and Gene Ontology

Reactome pathways

8 pathways

IDPathway
R-HSA-6811434COPI-dependent Golgi-to-ER retrograde traffic
R-HSA-983189Kinesins
R-HSA-109582Hemostasis
R-HSA-199991Membrane Trafficking
R-HSA-5653656Vesicle-mediated transport
R-HSA-6811442Intra-Golgi and retrograde Golgi-to-ER traffic
R-HSA-8856688Golgi-to-ER retrograde transport
R-HSA-983231Factors involved in megakaryocyte development and platelet production

MSigDB gene sets: 240 (showing top): GOBP_CHROMOSOME_ORGANIZATION, HORIUCHI_WTAP_TARGETS_DN, BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN, GNF2_CENPF, GOCC_KINESIN_COMPLEX, GNF2_H2AFX, MITSIADES_RESPONSE_TO_APLIDIN_DN, REACTOME_MEMBRANE_TRAFFICKING, GNF2_RRM2, GNF2_RRM1, GNF2_HMMR, GOBP_ORGANELLE_FISSION, GOBP_MICROTUBULE_DEPOLYMERIZATION, GNF2_SMC4L1, FISCHER_G2_M_CELL_CYCLE

GO Biological Process (6): mitotic sister chromatid segregation (GO:0000070), mitotic cell cycle (GO:0000278), microtubule-based movement (GO:0007018), microtubule depolymerization (GO:0007019), cell division (GO:0051301), regulation of cell division (GO:0051302)

GO Molecular Function (9): cytoskeletal motor activity (GO:0003774), ATP binding (GO:0005524), microtubule binding (GO:0008017), plus-end-directed microtubule motor activity (GO:0008574), ATP hydrolysis activity (GO:0016887), kinesin binding (GO:0019894), nucleotide binding (GO:0000166), microtubule motor activity (GO:0003777), protein binding (GO:0005515)

GO Cellular Component (15): astral microtubule (GO:0000235), nucleus (GO:0005634), nucleoplasm (GO:0005654), nucleolus (GO:0005730), cytoplasm (GO:0005737), cytosol (GO:0005829), kinesin complex (GO:0005871), nuclear body (GO:0016604), microtubule plus-end (GO:0035371), mitotic spindle astral microtubule (GO:0061673), mitotic spindle midzone (GO:1990023), microtubule end (GO:1990752), cytoskeleton (GO:0005856), microtubule (GO:0005874), spindle microtubule (GO:0005876)

Reactome top-level categories

Rollup of top-6 pathways:

CategoryPathways
Golgi-to-ER retrograde transport1
Factors involved in megakaryocyte development and platelet production1
Vesicle-mediated transport1
Membrane Trafficking1
Intra-Golgi and retrograde Golgi-to-ER traffic1
Hemostasis1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure4
intracellular membraneless organelle3
mitotic nuclear division2
ATP-dependent activity2
nuclear lumen2
mitotic spindle2
microtubule2
sister chromatid segregation1
mitotic cell cycle process1
cell cycle1
microtubule-based process1
microtubule polymerization or depolymerization1
protein depolymerization1
supramolecular fiber organization1
cellular process1
regulation of cellular process1
cell division1
molecular_function1
adenyl ribonucleotide binding1
purine ribonucleoside triphosphate binding1
tubulin binding1
microtubule motor activity1
ribonucleoside triphosphate phosphatase activity1
cytoskeletal protein binding1
nucleoside phosphate binding1
heterocyclic compound binding1
cytoskeletal motor activity1
polypeptide conformation or assembly isomerase activity1
binding1
aster1
spindle microtubule1
cytoplasmic microtubule1
intracellular membrane-bounded organelle1
intracellular anatomical structure1
cytoplasm1
microtubule associated complex1
nucleoplasm1
microtubule end1
astral microtubule1
spindle midzone1

Protein interactions and networks

STRING

1153 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
KIF18BKIF2CQ99661845
KIF18BCIB3Q96Q77653
KIF18BHJURPQ8NCD3607
KIF18BUBE2CO00762589
KIF18BCEP55Q53EZ4586
KIF18BNUF2Q9BZD4568
KIF18BDLGAP5Q15398556
KIF18BMAPRE1Q15691533
KIF18BBIRC5O15392523
KIF18BCDCA8Q53HL2512
KIF18BKIF4AO95239506
KIF18BKIF23Q02241504
KIF18BMELKQ14680503
KIF18BBUB1BO60566478
KIF18BTPX2Q9ULW0477

IntAct

59 interactions, top by confidence:

ABTypeScore
MAPRE1CLASP2psi-mi:“MI:0914”(association)0.850
NUP50KPNA4psi-mi:“MI:0914”(association)0.830
IMP3MPHOSPH10psi-mi:“MI:0914”(association)0.670
KIFBPKIF3Cpsi-mi:“MI:0914”(association)0.530
KIF2BBACH1psi-mi:“MI:0914”(association)0.530
TXLNBLAMC1psi-mi:“MI:0914”(association)0.530
KPNB1POM121Cpsi-mi:“MI:0914”(association)0.530
NUP62RGPD8psi-mi:“MI:0914”(association)0.530
PNMA2CCDC85Cpsi-mi:“MI:0914”(association)0.530
S100A4OIP5psi-mi:“MI:0914”(association)0.530
H3C1SMCHD1psi-mi:“MI:2364”(proximity)0.410
KIF18BFLOT2psi-mi:“MI:0915”(physical association)0.400
Ppp1cbMYO1Cpsi-mi:“MI:0914”(association)0.350
Cdc23ANAPC15psi-mi:“MI:0914”(association)0.350
MAPRE1CTNNB1psi-mi:“MI:0914”(association)0.350
Mapre1TPM1psi-mi:“MI:0914”(association)0.350
LTN1KIF2Apsi-mi:“MI:0914”(association)0.350
PPP1CBPLEKHG3psi-mi:“MI:0914”(association)0.350
MKI67ARHGAP10psi-mi:“MI:0914”(association)0.350
Prdm16ESYT2psi-mi:“MI:0914”(association)0.350
P4HA2CCDC85Cpsi-mi:“MI:0914”(association)0.350
PLOD1COL25A1psi-mi:“MI:0914”(association)0.350
MAPRE1CLASP2psi-mi:“MI:0914”(association)0.350
NELL2MATN2psi-mi:“MI:0914”(association)0.350

BioGRID (96): KIF18B (Affinity Capture-RNA), KIF18B (Affinity Capture-RNA), KIF18B (Affinity Capture-MS), KIF18B (Affinity Capture-MS), KIF18B (Proximity Label-MS), KIF18B (Proximity Label-MS), KIF18B (Affinity Capture-MS), KIF18B (Affinity Capture-MS), KIF18B (Affinity Capture-MS), KIF18B (Affinity Capture-MS), KIF18B (Affinity Capture-MS), KIF18B (Affinity Capture-MS), KIF18B (Affinity Capture-MS), KIF18B (Affinity Capture-MS), KIF18B (Affinity Capture-MS)

ESM2 similar proteins: A0JNH6, A0JNT9, A1A5D9, B7ZNG0, O35071, O35231, O35787, O43896, O95996, P58660, Q2M1P5, Q2TAC6, Q3TMW1, Q3UMT1, Q3UP38, Q3V0F0, Q4KLL9, Q58G59, Q5XI63, Q5XIS1, Q5ZLK6, Q63312, Q6NSJ2, Q6PFD6, Q7M6Z4, Q7M6Z5, Q80TF6, Q80U38, Q80VM7, Q86Y91, Q8C2K5, Q8CHW5, Q8CI12, Q8K330, Q8N283, Q8TDY4, Q8TE77, Q8TF21, Q90640, Q96FN5

Diamond homologs: A0A068FIK2, A0JN40, A1ZAJ2, A8BB91, A8BKD1, B1AVY7, B7ZC32, B9FUF9, B9GE13, D3YXS5, F1M4A4, F1QN54, F4J1U4, F4K0J3, F8WLE0, L0N7N1, O14782, O15066, O35066, O35071, O35787, O43093, O43896, O55165, O60282, O60333, O88658, O95239, P17210, P23678, P28738, P28741, P33173, P33174, P33175, P33176, P34540, P46863, P46865, P46867

SIGNOR signaling

1 interactions.

AEffectBMechanism
KIF18Bup-regulates“Plus-end directed sliding movement”

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 78 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

Reactome pathways:

PathwayPartnersFoldFDR
NS1 Mediated Effects on Host Pathways635.0×7e-06
ISG15 antiviral mechanism618.4×2e-04
Mitotic Spindle Checkpoint516.2×8e-04
HCMV Late Events612.1×8e-04
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal511.9×2e-03
Mitotic Metaphase and Anaphase611.8×8e-04
Mitotic Anaphase611.8×8e-04
HCMV Early Events69.9×1e-03

GO biological processes:

GO termPartnersFoldFDR
protein import into nucleus612.7×2e-03
cell division96.1×3e-03

Disease & clinical

Clinical variants and AI predictions

ClinVar

17 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance1
Likely benign1
Benign0

Top pathogenic / likely-pathogenic (0)

SpliceAI

2529 predictions. Top by Δscore:

VariantEffectΔscore
17:44928817:A:ACdonor_gain1.0000
17:44928818:C:CCdonor_gain1.0000
17:44928818:CTTGA:Cdonor_gain1.0000
17:44928878:AAGG:Adonor_gain1.0000
17:44928905:T:TAdonor_gain1.0000
17:44929020:CCAAC:Cacceptor_gain1.0000
17:44929021:CAAC:Cacceptor_gain1.0000
17:44929021:CAACC:Cacceptor_gain1.0000
17:44931597:CCTA:Cdonor_gain1.0000
17:44931600:A:ACdonor_gain1.0000
17:44931600:ACTG:Adonor_gain1.0000
17:44931601:C:CAdonor_gain1.0000
17:44931601:CTG:Cdonor_gain1.0000
17:44931601:CTGC:Cdonor_gain1.0000
17:44931725:GGAAC:Gacceptor_gain1.0000
17:44931729:CCTAA:Cacceptor_loss1.0000
17:44931730:C:CCacceptor_gain1.0000
17:44931730:CT:Cacceptor_loss1.0000
17:44932665:GAACT:Gdonor_loss1.0000
17:44932666:AACTC:Adonor_loss1.0000
17:44932667:ACTCA:Adonor_loss1.0000
17:44932668:CTC:Cdonor_loss1.0000
17:44932669:TCA:Tdonor_loss1.0000
17:44932670:CACT:Cdonor_loss1.0000
17:44932671:A:ACdonor_gain1.0000
17:44932672:C:CCdonor_gain1.0000
17:44932672:CT:Cdonor_gain1.0000
17:44932672:CTG:Cdonor_gain1.0000
17:44932672:CTGTT:Cdonor_gain1.0000
17:44932770:CTAC:Cacceptor_gain1.0000

AlphaMissense

5486 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
17:44934067:G:CS306R0.997
17:44934067:G:TS306R0.997
17:44934069:T:GS306R0.997
17:44933951:G:TA345D0.996
17:44934078:A:CY303D0.996
17:44934925:T:AE161V0.996
17:44933960:A:TL342H0.995
17:44934068:C:AS306I0.995
17:44934267:A:GL284P0.995
17:44934050:A:TL312H0.994
17:44934074:C:GR304P0.994
17:44934363:A:GL252P0.994
17:44934050:A:GL312P0.993
17:44934053:A:GL311P0.993
17:44934282:C:GR279P0.993
17:44933960:A:GL342P0.992
17:44933942:G:TA348D0.991
17:44933952:C:GA345P0.991
17:44934046:T:AK313N0.991
17:44934046:T:GK313N0.991
17:44934276:A:GL281P0.991
17:44934357:T:CD254G0.991
17:44934047:T:AK313I0.990
17:44934267:A:TL284H0.990
17:44934518:C:GA226P0.990
17:44934910:A:GL166P0.990
17:44934056:C:GR310P0.989
17:44934074:C:AR304L0.989
17:44934250:C:GA290P0.989
17:44934354:A:GL255P0.989

dbSNP variants (sampled 300 via entrez): RS1000234259 (17:44927946 T>C), RS1000553774 (17:44940836 G>A,C), RS1000589145 (17:44947536 A>C,G), RS1000686049 (17:44941401 C>T), RS1000959686 (17:44947207 G>C,T), RS1000983612 (17:44928463 G>C), RS1001534302 (17:44938266 T>C), RS1001618189 (17:44931936 G>A,C), RS1001862423 (17:44938156 C>T), RS1001940360 (17:44945915 A>G), RS1002328846 (17:44942513 G>A), RS1002463619 (17:44935925 G>A), RS1002592994 (17:44943335 T>C), RS1002659108 (17:44949150 G>T), RS1002856114 (17:44937026 C>T)

Disease associations

OMIM: gene MIM:614570 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

3 associations (top):

StudyTraitp-value
GCST004412_12Craniofacial microsomia9.000000e-06
GCST008916_39Asthma8.000000e-12
GCST010703_91Brain morphology (MOSTest)2.000000e-65

EFO canonical traits (1, from GWAS)

EFO IDTrait name
EFO:0004346neuroimaging measurement

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL6066179 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 1,538 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL1232461MOLIBRESIB21,538

PharmGKB: 1 entry (VIP=true, CPIC=false)

ChEMBL bioactivities

1 potent at pChembl≥5 of 1 total, top 1 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
5.17IC506770nMMOLIBRESIB

PubChem BioAssay actives

1 with measured affinity, of 6 total; 1 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
2-[(4S)-6-(4-chlorophenyl)-8-methoxy-1-methyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]-N-ethylacetamide2179049: Inhibition of KIF18B (unknown origin) incubated for 1 hr by colloidal coomassie staining based LC-MS/MS analysisic506.7700uM

CTD chemical–gene interactions

62 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
sodium arseniteaffects cotreatment, increases abundance, increases expression, decreases expression4
Air Pollutantsincreases abundance, increases oxidation, decreases expression, affects cotreatment3
Particulate Matterdecreases expression, increases abundance, increases expression3
methacrylaldehydeincreases oxidation, increases abundance, affects cotreatment2
Acetaminophendecreases expression, increases expression2
Acroleinaffects cotreatment, increases oxidation, increases abundance2
Arsenicincreases abundance, increases expression, affects cotreatment, decreases expression2
Benzo(a)pyreneincreases expression, affects methylation, decreases methylation2
Ozoneaffects cotreatment, increases oxidation, increases abundance2
Valproic Aciddecreases expression2
FR900359decreases phosphorylation1
dicrotophosincreases expression1
alpha-pineneaffects cotreatment, increases oxidation, increases abundance1
propionaldehydedecreases expression1
bisphenol Adecreases expression1
sodium arsenateincreases abundance, increases expression1
arseniteaffects binding, decreases reaction1
cobaltous chloridedecreases expression1
butyraldehydedecreases expression1
perfluorooctanoic aciddecreases expression1
zinc chromatedecreases expression, increases abundance1
potassium chromate(VI)increases expression1
cupric chlorideincreases expression1
coumarinincreases phosphorylation1
cupric oxidedecreases expression1
diallyl trisulfidedecreases expression1
pentanaldecreases expression1
phenethyl isothiocyanatedecreases expression1
chromium hexavalent iondecreases expression, increases abundance1
perfluoro-n-nonanoic aciddecreases expression1

ChEMBL screening assays

6 unique, capped per target: 6 binding

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL5697779BindingInhibition of KIF18B (unknown origin) assessed as fold change at 10 uM incubated for 1 hr by colloidal coomassie staining based LC-MS/MS analysisInhibition of BET recruitment to chromatin as an effective treatment for MLL-fusion leukaemia. — Nature

Cellosaurus cell lines

4 cell lines: 4 cancer cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_F1M5HyCyte A-549 KO-hKIF18BCancer cell lineMale
CVCL_F1S8HyCyte NCI-H1975 KO-hKIF18BCancer cell lineFemale
CVCL_SU72HAP1 KIF18B (-) 1Cancer cell lineMale
CVCL_XQ02HAP1 KIF18B (-) 2Cancer cell lineMale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

  • Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): craniofacial microsomia