KIRREL3-AS1

Summary

KIRREL3-AS1 (KIRREL3 antisense RNA 1, HGNC:42655) is a long non-coding RNA gene on chromosome 11q24.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:42655
Approved symbol	KIRREL3-AS1
Name	KIRREL3 antisense RNA 1
Location	11q24.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000257271
Ensembl biotype	lncRNA
Entrez	100874250
RNAcentral	URS00025E3460 — lncRNA, 2148 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000548204

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000548204 — 2 exons

Exon	Start	End
ENSE00002331248	126543947	126544244
ENSE00002346259	126610661	126610948

Expression profiles

Bgee: expression breadth broad, 93 present calls, max score 67.74.

Top tissues by expression

93 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	67.74	silver quality
minor salivary gland	UBERON:0001830	64.76	gold quality
saliva-secreting gland	UBERON:0001044	64.60	gold quality
lymph node	UBERON:0000029	57.40	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	56.19	gold quality
gall bladder	UBERON:0002110	55.45	gold quality
cortex of kidney	UBERON:0001225	54.21	gold quality
monocyte	CL:0000576	54.11	gold quality
prefrontal cortex	UBERON:0000451	54.00	gold quality
islet of Langerhans	UBERON:0000006	53.18	gold quality
thoracic mammary gland	UBERON:0005200	52.34	gold quality
adult mammalian kidney	UBERON:0000082	50.76	gold quality
kidney	UBERON:0002113	50.60	gold quality
primary visual cortex	UBERON:0002436	50.51	gold quality
myometrium	UBERON:0001296	50.46	gold quality
blood	UBERON:0000178	50.08	silver quality
pancreas	UBERON:0001264	50.07	gold quality
gastrocnemius	UBERON:0001388	49.74	gold quality
left ovary	UBERON:0002119	49.18	gold quality
ovary	UBERON:0000992	49.10	gold quality
body of stomach	UBERON:0001161	49.07	gold quality
Ammon’s horn	UBERON:0001954	47.98	gold quality
corpus callosum	UBERON:0002336	47.40	silver quality
superior frontal gyrus	UBERON:0002661	47.25	gold quality
right lobe of liver	UBERON:0001114	46.38	silver quality
left adrenal gland cortex	UBERON:0035825	46.30	gold quality
right ovary	UBERON:0002118	45.95	gold quality
body of pancreas	UBERON:0001150	45.85	silver quality
heart left ventricle	UBERON:0002084	45.63	gold quality
tibial artery	UBERON:0007610	45.56	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.