KIRREL3-AS3

Summary

KIRREL3-AS3 (KIRREL3 antisense RNA 3, HGNC:26855) is a long non-coding RNA gene on chromosome 11q24.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:26855
Approved symbol	KIRREL3-AS3
Name	KIRREL3 antisense RNA 3
Location	11q24.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ40224
Ensembl gene	ENSG00000218109
Ensembl biotype	lncRNA
Entrez	283165
RNAcentral	URS000039166A — lncRNA, 1768 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000525678

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000525678 — 3 exons

Exon	Start	End
ENSE00002162713	127005867	127006058
ENSE00002173618	127002910	127004324
ENSE00002177657	127005027	127005187

Expression profiles

Bgee: expression breadth broad, 44 present calls, max score 61.03.

Top tissues by expression

174 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	61.03	gold quality
ganglionic eminence	UBERON:0004023	60.75	gold quality
cortical plate	UBERON:0005343	57.82	silver quality
prefrontal cortex	UBERON:0000451	55.16	gold quality
nasal cavity epithelium	UBERON:0005384	53.71	gold quality
skin of hip	UBERON:0001554	50.23	silver quality
islet of Langerhans	UBERON:0000006	48.79	gold quality
deltoid	UBERON:0001476	48.10	gold quality
right testis	UBERON:0004534	48.00	gold quality
nucleus accumbens	UBERON:0001882	47.96	gold quality
left testis	UBERON:0004533	47.93	gold quality
frontal cortex	UBERON:0001870	47.76	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	47.25	gold quality
bronchial epithelial cell	CL:0002328	46.80	gold quality
neocortex	UBERON:0001950	46.74	gold quality
lower lobe of lung	UBERON:0008949	46.74	silver quality
upper lobe of lung	UBERON:0008948	46.71	silver quality
pancreas	UBERON:0001264	46.68	gold quality
testis	UBERON:0000473	46.55	gold quality
bronchus	UBERON:0002185	46.47	gold quality
cortex of kidney	UBERON:0001225	46.44	gold quality
right hemisphere of cerebellum	UBERON:0014890	46.16	gold quality
adult mammalian kidney	UBERON:0000082	45.94	gold quality
cerebellar hemisphere	UBERON:0002245	45.32	gold quality
Brodmann (1909) area 9	UBERON:0013540	45.20	gold quality
adrenal gland	UBERON:0002369	44.66	gold quality
cerebral cortex	UBERON:0000956	44.55	gold quality
nasal cavity mucosa	UBERON:0001826	44.23	gold quality
thyroid gland	UBERON:0002046	44.20	gold quality
forebrain	UBERON:0001890	43.92	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.