KIRREL3-AS4

Summary

KIRREL3-AS4 (KIRREL3 antisense RNA 4, HGNC:58263) is a long non-coding RNA gene on chromosome 11q24.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58263
Approved symbol	KIRREL3-AS4
Name	KIRREL3 antisense RNA 4
Location	11q24.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254607
Ensembl biotype	lncRNA
Entrez	101929427
RNAcentral	URS000075B28E — lncRNA, 473 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000534620, ENST00000550747, ENST00000726869

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000534620 — 2 exons

Exon	Start	End
ENSE00004051836	126655985	126656171
ENSE00004051839	126681783	126682114

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 98.06.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	98.06	gold quality
right lobe of liver	UBERON:0001114	85.27	gold quality
liver	UBERON:0002107	83.31	gold quality
ventricular zone	UBERON:0003053	69.54	gold quality
corpus callosum	UBERON:0002336	67.21	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	66.53	gold quality
cortical plate	UBERON:0005343	66.42	gold quality
minor salivary gland	UBERON:0001830	65.44	gold quality
saliva-secreting gland	UBERON:0001044	65.39	gold quality
skeletal muscle tissue	UBERON:0001134	65.12	silver quality
sural nerve	UBERON:0015488	64.69	gold quality
lymph node	UBERON:0000029	64.48	gold quality
quadriceps femoris	UBERON:0001377	64.14	gold quality
islet of Langerhans	UBERON:0000006	64.10	gold quality
cerebellar vermis	UBERON:0004720	63.05	gold quality
bone marrow	UBERON:0002371	63.01	gold quality
Ammon’s horn	UBERON:0001954	62.85	gold quality
tonsil	UBERON:0002372	61.72	gold quality
prefrontal cortex	UBERON:0000451	61.15	gold quality
gall bladder	UBERON:0002110	60.30	gold quality
thymus	UBERON:0002370	59.83	silver quality
monocyte	CL:0000576	59.39	gold quality
mucosa of stomach	UBERON:0001199	59.27	gold quality
pancreas	UBERON:0001264	58.21	gold quality
superior frontal gyrus	UBERON:0002661	58.16	gold quality
spinal cord	UBERON:0002240	57.83	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	57.82	gold quality
vermiform appendix	UBERON:0001154	57.43	gold quality
spleen	UBERON:0002106	55.92	gold quality
right coronary artery	UBERON:0001625	55.79	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.