KLHDC7B
geneOn this page
Also known as MGC16635
Summary
KLHDC7B (kelch domain containing 7B, HGNC:25145) is a protein-coding gene on chromosome 22q13.33, encoding Kelch domain-containing protein 7B (Q96G42).
At a glance
- GWAS associations: 6
- Clinical variants (ClinVar): 124 total — 2 pathogenic
- MANE Select transcript:
NM_138433
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:25145 |
| Approved symbol | KLHDC7B |
| Name | kelch domain containing 7B |
| Location | 22q13.33 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MGC16635 |
| Ensembl gene | ENSG00000130487 |
| Ensembl biotype | protein_coding |
| OMIM | 620521 |
| Entrez | 113730 |
Gene structure
Transcript identifiers
Ensembl transcripts: 2 — 1 protein_coding_CDS_not_defined, 1 protein_coding
ENST00000434237, ENST00000648057
RefSeq mRNA: 1 — MANE Select: NM_138433
NM_138433
CCDS: CCDS14097
Canonical transcript exons
ENST00000648057 — 1 exons
| Exon | Start | End |
|---|---|---|
| ENSE00003840606 | 50545899 | 50551023 |
Expression profiles
Bgee: expression breadth ubiquitous, 128 present calls, max score 81.94.
FANTOM5 (CAGE): breadth broad, TPM avg 1.7847 / max 165.7375, expressed in 439 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 193025 | 0.9076 | 213 |
| 193028 | 0.4399 | 123 |
| 193023 | 0.1957 | 79 |
| 193026 | 0.1117 | 39 |
| 193024 | 0.0736 | 35 |
| 193027 | 0.0563 | 25 |
Top tissues by expression
226 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| palpebral conjunctiva | UBERON:0001812 | 81.94 | gold quality |
| granulocyte | CL:0000094 | 78.62 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 78.20 | silver quality |
| epithelium of nasopharynx | UBERON:0001951 | 78.04 | gold quality |
| pancreatic ductal cell | CL:0002079 | 75.79 | silver quality |
| kidney epithelium | UBERON:0004819 | 75.36 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 73.92 | gold quality |
| leukocyte | CL:0000738 | 72.51 | gold quality |
| monocyte | CL:0000576 | 71.98 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 70.80 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 70.45 | gold quality |
| ileal mucosa | UBERON:0000331 | 70.12 | silver quality |
| superficial temporal artery | UBERON:0001614 | 70.12 | gold quality |
| thymus | UBERON:0002370 | 69.03 | gold quality |
| blood | UBERON:0000178 | 68.63 | gold quality |
| vermiform appendix | UBERON:0001154 | 66.38 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 66.25 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 65.93 | gold quality |
| spleen | UBERON:0002106 | 65.61 | gold quality |
| bone marrow cell | CL:0002092 | 65.59 | silver quality |
| lymph node | UBERON:0000029 | 64.89 | gold quality |
| tibialis anterior | UBERON:0001385 | 64.06 | silver quality |
| caecum | UBERON:0001153 | 61.83 | gold quality |
| bone marrow | UBERON:0002371 | 60.50 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 59.59 | gold quality |
| myocardium | UBERON:0002349 | 58.99 | gold quality |
| lower lobe of lung | UBERON:0008949 | 58.98 | silver quality |
| amniotic fluid | UBERON:0000173 | 58.37 | silver quality |
| esophagus squamous epithelium | UBERON:0006920 | 58.24 | silver quality |
| trachea | UBERON:0003126 | 56.98 | silver quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 1.87 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
21 targeting KLHDC7B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-9902 | 99.89 | 69.15 | 2250 |
| HSA-MIR-4492 | 99.87 | 68.25 | 3611 |
| HSA-MIR-3175 | 99.65 | 66.30 | 2031 |
| HSA-MIR-486-3P | 99.51 | 66.82 | 1901 |
| HSA-MIR-4688 | 99.48 | 64.68 | 828 |
| HSA-MIR-6743-5P | 99.48 | 63.60 | 721 |
| HSA-MIR-4498 | 99.47 | 67.42 | 2360 |
| HSA-MIR-7113-3P | 98.75 | 65.71 | 1120 |
| HSA-MIR-198 | 98.70 | 67.32 | 920 |
| HSA-MIR-423-5P | 98.69 | 67.48 | 1522 |
| HSA-MIR-3184-5P | 98.56 | 67.13 | 1491 |
| HSA-MIR-3179 | 98.22 | 65.90 | 1445 |
| HSA-MIR-6893-3P | 97.79 | 64.91 | 1238 |
| HSA-MIR-3085-5P | 97.72 | 65.43 | 544 |
| HSA-MIR-376C-3P | 97.63 | 68.88 | 1263 |
| HSA-MIR-4308 | 97.56 | 67.13 | 1385 |
| HSA-MIR-1225-3P | 97.29 | 64.60 | 876 |
| HSA-MIR-370-3P | 97.09 | 64.92 | 1221 |
| HSA-MIR-3907 | 96.76 | 65.04 | 662 |
| HSA-MIR-7160-3P | 96.40 | 64.15 | 462 |
| HSA-MIR-381-5P | 91.91 | 65.03 | 65 |
Literature-anchored findings (GeneRIF, showing 3)
- Hs.137007 gene is a novel gene specifically expressed in the breast that has a role in epigenetic regulation of breast cancer [Hs.137007] (PMID:20372783)
- HPV E7 affects the function of cervical cancer cells via the TAL1/lncEBIC/KLHDC7B axis. (PMID:33760214)
- KLHDC7B as a novel diagnostic biomarker in urine exosomal mRNA promotes bladder urothelial carcinoma cell proliferation and migration, inhibits apoptosis. (PMID:37888201)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Klhdc7b | ENSMUSG00000091680 |
| rattus_norvegicus | Klhdc7b | ENSRNOG00000032419 |
Paralogs (54): KLHL13 (ENSG00000003096), KLHL20 (ENSG00000076321), KEAP1 (ENSG00000079999), KLHL42 (ENSG00000087448), KLHL22 (ENSG00000099910), KLHL4 (ENSG00000102271), KLHL2 (ENSG00000109466), KLHL5 (ENSG00000109790), BACH2 (ENSG00000112182), KLHL18 (ENSG00000114648), KLHL24 (ENSG00000114796), IVNS1ABP (ENSG00000116679), KLHL12 (ENSG00000117153), KLHL29 (ENSG00000119771), KBTBD7 (ENSG00000120696), KLHL7 (ENSG00000122550), KLHL31 (ENSG00000124743), KLHL36 (ENSG00000135686), KLHL8 (ENSG00000145332), KLHL3 (ENSG00000146021), KLHL35 (ENSG00000149243), KLHL1 (ENSG00000150361), BACH1 (ENSG00000156273), KLHL40 (ENSG00000157119), KLHL10 (ENSG00000161594), KLHL21 (ENSG00000162413), KLHDC8A (ENSG00000162873), KBTBD8 (ENSG00000163376), KBTBD6 (ENSG00000165572), KLHL26 (ENSG00000167487), KLHL30 (ENSG00000168427), KBTBD2 (ENSG00000170852), KLHL6 (ENSG00000172578), KLHL15 (ENSG00000174010), KLHL38 (ENSG00000175946), KBTBD11 (ENSG00000176595), KLHDC7A (ENSG00000179023), KLHL28 (ENSG00000179454), KBTBD3 (ENSG00000182359), KLHL33 (ENSG00000185271)
Protein
Protein identifiers
Kelch domain-containing protein 7B — Q96G42 (reviewed: Q96G42)
All UniProt accessions (1): A0A3B3ISF6
UniProt curated annotations — full annotation on UniProt →
RefSeq proteins (1): NP_612442* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR006652 | Kelch_1 | Repeat |
| IPR015915 | Kelch-typ_b-propeller | Homologous_superfamily |
| IPR052310 | Kelch/BTB_domain_protein | Family |
Pfam: PF01344
UniProt features (11 total): repeat 5, compositionally biased region 4, chain 1, region of interest 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q96G42-F1 | 69.93 | 0.42 |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 31 (showing top):
chr22q13, WANG_SMARCE1_TARGETS_UP, RICKMAN_HEAD_AND_NECK_CANCER_F, MIR376C_3P, MIR3179, GSE13485_CTRL_VS_DAY3_YF17D_VACCINE_PBMC_DN, GSE13485_CTRL_VS_DAY7_YF17D_VACCINE_PBMC_DN, GSE13485_DAY1_VS_DAY7_YF17D_VACCINE_PBMC_DN, GSE13485_DAY3_VS_DAY7_YF17D_VACCINE_PBMC_DN, GSE13485_PRE_VS_POST_YF17D_VACCINATION_PBMC_DN, BLANCO_MELO_COVID19_SARS_COV_2_INFECTION_CALU3_CELLS_UP, BLANCO_MELO_BRONCHIAL_EPITHELIAL_CELLS_INFLUENZA_A_DEL_NS1_INFECTION_UP, NAKAYAMA_FRA2_TARGETS, GAO_LARGE_INTESTINE_24W_C11_PANETH_LIKE_CELL, ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_AGE_20_50YO_1DY_UP
GO Biological Process (0):
GO Molecular Function (1): protein binding (GO:0005515)
GO Cellular Component (0):
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| binding | 1 |
Protein interactions and networks
STRING
386 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| KLHDC7B | CLRN2 | A0PK11 | 490 |
| KLHDC7B | OR4F21 | O95013 | 417 |
| KLHDC7B | ZNF487 | B1APH4 | 400 |
| KLHDC7B | GARIN5A | Q6IPT2 | 393 |
| KLHDC7B | FSCN2 | O14926 | 359 |
| KLHDC7B | TRABD | Q9H4I3 | 339 |
| KLHDC7B | CCDC68 | Q9H2F9 | 334 |
| KLHDC7B | SYNJ2 | O15056 | 326 |
| KLHDC7B | CIB4 | A0PJX0 | 321 |
| KLHDC7B | EVA1B | Q9NVM1 | 316 |
| KLHDC7B | RNF208 | Q9H0X6 | 316 |
| KLHDC7B | TRIOBP | Q9H2D6 | 311 |
| KLHDC7B | SHCBP1L | Q9BZQ2 | 301 |
| KLHDC7B | BAIAP2L2 | Q6UXY1 | 300 |
| KLHDC7B | DENND6B | Q8NEG7 | 300 |
IntAct
73 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| KLHDC7B | MAPRE3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KLHDC7B | HNRNPUL1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| FNDC3B | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| TBX6 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| KLHDC7B | A1CF | psi-mi:“MI:0915”(physical association) | 0.560 |
| SMUG1 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| BHLHE40 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| KLHDC7B | PATZ1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ESRP1 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| PHC2 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| RBPMS | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| NFYC | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| KLHDC7B | SPMIP9 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KLHDC7B | WWOX | psi-mi:“MI:0915”(physical association) | 0.560 |
| TP53BP1 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| RBPMS2 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| KLHDC7B | RHOXF2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KLHDC7B | ZC3H10 | psi-mi:“MI:0915”(physical association) | 0.560 |
| QRICH1 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| DTX2 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| LIMS4 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| POGZ | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| TLE5 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.560 |
| NUDCD3 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.400 |
| CFTR | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.370 |
| EPHB6 | PGRMC1 | psi-mi:“MI:0914”(association) | 0.350 |
| MAPRE3 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.000 |
| HNRNPUL1 | KLHDC7B | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (27): KLHDC7B (Two-hybrid), KLHDC7B (Two-hybrid), KLHDC7B (Two-hybrid), KLHDC7B (Two-hybrid), KLHDC7B (Two-hybrid), KLHDC7B (Two-hybrid), KLHDC7B (Two-hybrid), KLHDC7B (Two-hybrid), KLHDC7B (Two-hybrid), KLHDC7B (Two-hybrid), RHOXF2 (Two-hybrid), BHLHE40 (Two-hybrid), PHC2 (Two-hybrid), ZC3H10 (Two-hybrid), POGZ (Two-hybrid)
ESM2 similar proteins: A1L3C1, A2AWP8, A2RRU4, A6QM06, A6QNS9, E1BBQ2, F1LQY6, G3V9M2, O43189, O94827, P29372, P29590, P41155, P97260, Q01113, Q02833, Q04841, Q0P5I0, Q12770, Q13387, Q13505, Q29RM4, Q32L49, Q3V1H9, Q5MNU5, Q5R5M3, Q66T02, Q69Z89, Q6GQT6, Q6IPT2, Q6RFZ7, Q6ZN54, Q70EL4, Q7Z6G3, Q8BQB4, Q8C4U2, Q8N1F8, Q8N554, Q8WWW0, Q8WXF8
Diamond homologs: A0JN76, A1L4W5, A2AAX3, B1WBS3, B2RXF5, B7U179, D3YUB6, D3ZA50, O14867, O15062, O43167, P0DMR5, P0DMR6, P41182, P41183, P97303, Q0IJ29, Q13105, Q1L8W0, Q24174, Q3B725, Q3B7N9, Q52KB5, Q5EXX3, Q5R4Q7, Q5R4S6, Q5R5N5, Q5RGB8, Q5ZJU2, Q5ZM39, Q60821, Q6DDV0, Q6DEL7, Q6NRM8, Q6P882, Q6P8B3, Q6YCH1, Q6YCH2, Q6ZSB9, Q717B2
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
124 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 2 |
| Likely pathogenic | 0 |
| Uncertain significance | 106 |
| Likely benign | 16 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (2)
| Variant ID | HGVS | Classification |
|---|---|---|
| 154200 | GRCh38/hg38 22q13.33(chr22:50485457-50759410)x1 | Pathogenic |
| 976871 | NC_000022.11:g.48500337_50739785del | Pathogenic |
SpliceAI
38 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 22:50550751:A:AG | acceptor_gain | 0.7700 |
| 22:50550752:A:G | acceptor_gain | 0.7600 |
| 22:50548599:G:GT | donor_gain | 0.5800 |
| 22:50550755:T:G | acceptor_gain | 0.5600 |
| 22:50550750:T:G | acceptor_gain | 0.5400 |
| 22:50550751:AAAAT:A | acceptor_gain | 0.5200 |
| 22:50548837:TG:T | acceptor_gain | 0.4900 |
| 22:50548838:GG:G | acceptor_gain | 0.4900 |
| 22:50549992:G:GT | donor_gain | 0.4800 |
| 22:50548099:A:T | donor_gain | 0.4400 |
| 22:50550757:T:TA | acceptor_gain | 0.4300 |
| 22:50548197:C:T | donor_gain | 0.3900 |
| 22:50548213:G:GT | donor_gain | 0.3300 |
| 22:50549705:A:AG | donor_gain | 0.3100 |
| 22:50549706:G:GG | donor_gain | 0.3100 |
| 22:50548604:C:A | donor_gain | 0.3000 |
| 22:50550762:A:AG | acceptor_gain | 0.3000 |
| 22:50550763:G:GG | acceptor_gain | 0.3000 |
| 22:50549727:G:T | donor_gain | 0.2900 |
| 22:50550753:AATGT:A | acceptor_gain | 0.2900 |
| 22:50550753:A:AG | acceptor_gain | 0.2600 |
| 22:50548408:GCC:G | donor_gain | 0.2500 |
| 22:50548834:G:GA | acceptor_gain | 0.2500 |
| 22:50550754:ATGT:A | acceptor_gain | 0.2500 |
| 22:50548134:C:T | donor_gain | 0.2400 |
| 22:50550758:G:A | acceptor_gain | 0.2400 |
| 22:50548574:C:A | donor_gain | 0.2300 |
| 22:50549726:G:GT | donor_gain | 0.2200 |
| 22:50549780:C:CT | acceptor_gain | 0.2200 |
| 22:50550749:A:AG | acceptor_gain | 0.2200 |
AlphaMissense
7745 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 22:50549448:T:A | W428R | 0.997 |
| 22:50549448:T:C | W428R | 0.997 |
| 22:50549527:T:A | V454D | 0.997 |
| 22:50549450:G:C | W428C | 0.996 |
| 22:50549450:G:T | W428C | 0.996 |
| 22:50549481:T:C | F439L | 0.995 |
| 22:50549483:C:A | F439L | 0.995 |
| 22:50549483:C:G | F439L | 0.995 |
| 22:50549583:T:A | W473R | 0.995 |
| 22:50549583:T:C | W473R | 0.995 |
| 22:50549585:G:C | W473C | 0.995 |
| 22:50549585:G:T | W473C | 0.995 |
| 22:50549319:T:A | W385R | 0.994 |
| 22:50549319:T:C | W385R | 0.994 |
| 22:50549697:T:G | Y511D | 0.994 |
| 22:50549718:T:A | W518R | 0.994 |
| 22:50549718:T:C | W518R | 0.994 |
| 22:50549236:T:C | F357S | 0.992 |
| 22:50549562:T:G | Y466D | 0.992 |
| 22:50549659:T:C | F498S | 0.992 |
| 22:50549392:C:A | A409D | 0.991 |
| 22:50549658:T:C | F498L | 0.991 |
| 22:50549660:C:A | F498L | 0.991 |
| 22:50549660:C:G | F498L | 0.991 |
| 22:50549160:T:A | W332R | 0.989 |
| 22:50549160:T:C | W332R | 0.989 |
| 22:50549401:G:T | G412V | 0.989 |
| 22:50549652:T:G | Y496D | 0.989 |
| 22:50549720:G:C | W518C | 0.989 |
| 22:50549720:G:T | W518C | 0.989 |
dbSNP variants (sampled 300 via entrez): RS1000775439 (22:50550655 G>A), RS1000841692 (22:50547283 G>A,T), RS1000920445 (22:50547504 T>C), RS1000989632 (22:50545082 C>T), RS1001340166 (22:50544786 C>A,T), RS1001692560 (22:50548084 G>A,T), RS1001723562 (22:50548443 G>A,C), RS1001724708 (22:50546430 G>A,C), RS1002026267 (22:50546905 C>G,T), RS1002496754 (22:50550890 C>A,T), RS1002843338 (22:50548356 C>G,T), RS1003246485 (22:50549207 C>A,T), RS1003367112 (22:50547747 C>T), RS1003696261 (22:50545713 C>G,T), RS1004132385 (22:50545985 AGCTGGTGGG>A)
Disease associations
OMIM: gene MIM:620521 | disease phenotypes: MIM:606232
GenCC curated gene-disease
Mondo (1): Phelan-McDermid syndrome (MONDO:0011652)
Orphanet (1): Phelan-McDermid syndrome (Orphanet:48652)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
6 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000587_8 | Mean corpuscular hemoglobin | 4.000000e-08 |
| GCST005996_9 | Red blood cell count | 4.000000e-10 |
| GCST012020_516 | Serum metabolite levels | 4.000000e-23 |
| GCST012442_12 | Age-related hearing impairment | 2.000000e-29 |
| GCST012442_26 | Age-related hearing impairment | 3.000000e-10 |
| GCST90002393_596 | Monocyte count | 3.000000e-09 |
EFO canonical traits (4, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004509 | hemoglobin measurement |
| EFO:0004527 | mean corpuscular hemoglobin |
| EFO:0004305 | erythrocyte count |
| EFO:0005091 | monocyte count |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| C536801 | Telomeric 22q13 Monosomy Syndrome (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
39 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | increases expression, decreases expression | 4 |
| bisphenol A | affects expression, increases expression | 2 |
| Cyclosporine | increases expression | 2 |
| GSK-J4 | decreases expression | 1 |
| sotorasib | affects cotreatment, increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| hydroxyhydroquinone | decreases reaction, increases expression | 1 |
| tris(2-butoxyethyl) phosphate | affects expression | 1 |
| beta-lapachone | increases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | increases expression | 1 |
| butyraldehyde | increases expression | 1 |
| perfluorooctanoic acid | increases expression | 1 |
| ferrous chloride | decreases expression | 1 |
| 4-aminobenzhydrazide | increases expression, decreases reaction | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| abrine | increases expression | 1 |
| NSC 689534 | affects binding, increases expression | 1 |
| trametinib | affects cotreatment, increases expression | 1 |
| NVP-BKM120 | affects cotreatment, increases expression | 1 |
| Bortezomib | increases expression | 1 |
| Resveratrol | decreases expression, affects cotreatment | 1 |
| Sunitinib | increases expression | 1 |
| Microplastics | affects expression, increases abundance | 1 |
| Benzo(a)pyrene | affects methylation, decreases methylation | 1 |
| Calcitriol | increases expression | 1 |
| Cisplatin | decreases expression | 1 |
| Copper | affects binding, increases expression | 1 |
| Dexamethasone | decreases expression | 1 |
| Formaldehyde | decreases expression | 1 |
| Iron | increases expression | 1 |
Clinical trials (associated diseases)
16 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT07281079 | PHASE3 | RECRUITING | A Study of NNZ-2591 in Pediatric Participants With Phelan-McDermid Syndrome |
| NCT07593391 | PHASE3 | RECRUITING | An Open-label Study of NNZ-2591 in Pediatric Participants With Phelan-McDermid Syndrome |
| NCT01525901 | PHASE2 | COMPLETED | Clinical Trial in 22q13 Deletion Syndrome(Phelan-McDermid Syndrome) |
| NCT02710084 | PHASE2 | COMPLETED | Piloting Treatment With Intranasal Oxytocin in Phelan-McDermid Syndrome |
| NCT03493607 | PHASE2 | COMPLETED | AMO-01 to Treat Adolescents and Adults With Phelan-McDermid Syndrome (PMS) and Co-morbid Epilepsy |
| NCT04003207 | PHASE2 | COMPLETED | Growth Hormone Treatment in Children With Phelan McDermid Syndrome |
| NCT05025241 | PHASE2 | COMPLETED | An Open-Label Study of Oral NNZ-2591 in Phelan-McDermid Syndrome (PMS-001) |
| NCT05187377 | PHASE2 | COMPLETED | A Controlled Trial of Growth Hormone in Phelan-McDermid Syndrome and Idiopathic Autism |
| NCT05105685 | PHASE1/PHASE2 | COMPLETED | Effectiveness of Recombinant Human Growth Hormone Therapy for Children With PMS |
| NCT06662188 | PHASE1/PHASE2 | RECRUITING | JAG201 Gene Therapy Study in Children & Adults With SHANK3 Haploinsufficiency |
| NCT02000167 | Not specified | COMPLETED | Mitochondrial Dysfunction in Phelan-McDermid Syndrome |
| NCT02461420 | Not specified | ACTIVE_NOT_RECRUITING | Mapping the Genotype, Phenotype, and Natural History of Phelan-McDermid Syndrome |
| NCT03426059 | Not specified | COMPLETED | Mapping the Phenotype in Adults With Phelan-McDermid Syndrome |
| NCT03836300 | Not specified | ENROLLING_BY_INVITATION | Parent and Infant Inter(X)Action Intervention (PIXI) |
| NCT04312152 | Not specified | UNKNOWN | Q10 Ubiquinol in Autism Spectrum Disorder and in Phelan-McDermid Syndrome. |
| NCT07014020 | Not specified | RECRUITING | RB001 Gene Therapy Study in Children With SHANK3-related Phelan McDermid Syndrome (PMS) |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): Phelan-McDermid syndrome, presbycusis