KPNB1-DT

Summary

KPNB1-DT (KPNB1 divergent transcript, HGNC:55336) is a long non-coding RNA gene on chromosome 17q21.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55336
Approved symbol	KPNB1-DT
Name	KPNB1 divergent transcript
Location	17q21.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000263766
Ensembl biotype	lncRNA
Entrez	112268184
RNAcentral	URS00021EDA5C — lncRNA, 2744 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 15 — 15 lncRNA

ENST00000580045, ENST00000582066, ENST00000582389, ENST00000584391, ENST00000840035, ENST00000840036, ENST00000840037, ENST00000840038, ENST00000840039, ENST00000840040, ENST00000840041, ENST00000840042, ENST00000840043, ENST00000840044, ENST00000840045

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000580045 — 3 exons

Exon	Start	End
ENSE00002709198	47649396	47649416
ENSE00002724683	47636512	47636601
ENSE00002724912	47626006	47626627

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 86.85.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.85	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.12	gold quality
left testis	UBERON:0004533	85.88	gold quality
testis	UBERON:0000473	85.69	gold quality
right testis	UBERON:0004534	85.34	gold quality
calcaneal tendon	UBERON:0003701	83.52	gold quality
blood	UBERON:0000178	82.37	gold quality
bone marrow cell	CL:0002092	79.20	gold quality
monocyte	CL:0000576	78.21	gold quality
colonic epithelium	UBERON:0000397	77.82	gold quality
leukocyte	CL:0000738	77.45	gold quality
bone marrow	UBERON:0002371	76.20	gold quality
right adrenal gland cortex	UBERON:0035827	74.16	gold quality
right adrenal gland	UBERON:0001233	73.97	gold quality
ventricular zone	UBERON:0003053	73.04	gold quality
popliteal artery	UBERON:0002250	72.15	gold quality
tibial artery	UBERON:0007610	72.11	gold quality
granulocyte	CL:0000094	72.02	gold quality
left adrenal gland	UBERON:0001234	71.83	gold quality
left adrenal gland cortex	UBERON:0035825	71.77	gold quality
vagina	UBERON:0000996	71.75	gold quality
left ovary	UBERON:0002119	71.68	gold quality
right lobe of thyroid gland	UBERON:0001119	71.65	gold quality
mucosa of transverse colon	UBERON:0004991	71.56	gold quality
adrenal gland	UBERON:0002369	71.31	gold quality
ovary	UBERON:0000992	71.28	gold quality
thyroid gland	UBERON:0002046	71.27	gold quality
left lobe of thyroid gland	UBERON:0001120	71.18	gold quality
right ovary	UBERON:0002118	71.15	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	70.96	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.85

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.