KRIT1
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Also known as CAM
Summary
KRIT1 (KRIT1 ankyrin repeat containing, HGNC:1573) is a protein-coding gene on chromosome 7q21.2, encoding Krev interaction trapped protein 1 (O00522). Component of the CCM signaling pathway which is a crucial regulator of heart and vessel formation and integrity.
This gene encodes a protein containing four ankyrin repeats, a band 4.1/ezrin/radixin/moesin (FERM) domain, and multiple NPXY sequences. The encoded protein is localized in the nucleus and cytoplasm. It binds to integrin cytoplasmic domain-associated protein-1 alpha (ICAP1alpha), and plays a critical role in beta1-integrin-mediated cell proliferation. It associates with junction proteins and RAS-related protein 1A (Rap1A), which requires the encoded protein for maintaining the integrity of endothelial junctions. It is also a microtubule-associated protein and may play a role in microtubule targeting. Mutations in this gene result in cerebral cavernous malformations. Multiple alternatively spliced transcript variants have been found for this gene.
Source: NCBI Gene 889 — RefSeq curated summary.
At a glance
- Gene–disease (curated): cerebral cavernous malformation 1 (Definitive, GenCC) — +1 more curated relationship
- GWAS associations: 2
- Clinical variants (ClinVar): 833 total — 279 pathogenic, 65 likely-pathogenic
- Phenotypes (HPO): 33
- MANE Select transcript:
NM_194454
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:1573 |
| Approved symbol | KRIT1 |
| Name | KRIT1 ankyrin repeat containing |
| Location | 7q21.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CAM |
| Ensembl gene | ENSG00000001631 |
| Ensembl biotype | protein_coding |
| OMIM | 604214 |
| Entrez | 889 |
Gene structure
Transcript identifiers
Ensembl transcripts: 81 — 33 protein_coding, 28 retained_intron, 17 nonsense_mediated_decay, 3 protein_coding_CDS_not_defined
ENST00000340022, ENST00000394503, ENST00000394505, ENST00000394507, ENST00000412043, ENST00000413688, ENST00000422347, ENST00000425073, ENST00000425919, ENST00000430102, ENST00000433016, ENST00000440209, ENST00000444960, ENST00000445516, ENST00000452773, ENST00000454017, ENST00000458177, ENST00000466166, ENST00000470309, ENST00000475770, ENST00000486261, ENST00000487168, ENST00000489087, ENST00000684808, ENST00000685285, ENST00000685431, ENST00000686043, ENST00000686094, ENST00000686149, ENST00000686233, ENST00000686527, ENST00000686619, ENST00000686785, ENST00000687135, ENST00000687517, ENST00000687627, ENST00000687876, ENST00000688180, ENST00000688196, ENST00000688314, ENST00000688404, ENST00000688580, ENST00000688665, ENST00000688766, ENST00000688781, ENST00000689082, ENST00000689411, ENST00000689539, ENST00000689556, ENST00000689778, ENST00000689789, ENST00000690292, ENST00000690529, ENST00000690720, ENST00000690751, ENST00000690904, ENST00000690908, ENST00000691222, ENST00000691239, ENST00000691622, ENST00000691827, ENST00000691890, ENST00000692000, ENST00000692157, ENST00000692205, ENST00000692361, ENST00000692428, ENST00000692690, ENST00000692807, ENST00000693563, ENST00000905037, ENST00000905038, ENST00000905039, ENST00000905040, ENST00000905041, ENST00000905042, ENST00000936491, ENST00000967258, ENST00000967259, ENST00000967260, ENST00000967261
RefSeq mRNA: 34 — MANE Select: NM_194454
NM_001013406, NM_001350669, NM_001350670, NM_001350671, NM_001350672, NM_001350673, NM_001350674, NM_001350675, NM_001350676, NM_001350677, NM_001350678, NM_001350679, NM_001350680, NM_001350681, NM_001350682, NM_001350683, NM_001350684, NM_001350685, NM_001350686, NM_001350687, NM_001350688, NM_001350689, NM_001350690, NM_001350691, NM_001350692, NM_001350693, NM_001350694, NM_001350695, NM_001350696, NM_001350697, NM_004912, NM_194454, NM_194455, NM_194456
CCDS: CCDS34679, CCDS5624
Canonical transcript exons
ENST00000394505 — 19 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001170047 | 92236413 | 92236542 |
| ENSE00001170062 | 92240993 | 92241152 |
| ENSE00001170077 | 92244002 | 92244149 |
| ENSE00001518667 | 92245790 | 92245914 |
| ENSE00001518669 | 92244902 | 92245171 |
| ENSE00003468592 | 92214611 | 92214777 |
| ENSE00003473862 | 92234449 | 92234592 |
| ENSE00003501181 | 92201307 | 92201423 |
| ENSE00003527201 | 92237667 | 92237759 |
| ENSE00003532623 | 92234808 | 92234923 |
| ENSE00003551421 | 92213195 | 92213401 |
| ENSE00003567675 | 92213892 | 92213979 |
| ENSE00003611468 | 92225720 | 92225827 |
| ENSE00003631381 | 92226526 | 92226682 |
| ENSE00003631960 | 92221902 | 92222053 |
| ENSE00003656911 | 92199413 | 92200804 |
| ENSE00003694626 | 92222822 | 92222978 |
| ENSE00003788179 | 92235403 | 92235646 |
| ENSE00003926925 | 92242034 | 92242137 |
Expression profiles
Bgee: expression breadth ubiquitous, 138 present calls, max score 95.27.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 12.1617 / max 311.1728, expressed in 1755 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 84784 | 10.9122 | 1734 |
| 84783 | 0.5187 | 258 |
| 84786 | 0.3262 | 92 |
| 84781 | 0.3050 | 63 |
| 84782 | 0.0665 | 16 |
| 84785 | 0.0333 | 5 |
Top tissues by expression
139 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| calcaneal tendon | UBERON:0003701 | 95.27 | gold quality |
| colonic epithelium | UBERON:0000397 | 95.02 | gold quality |
| corpus callosum | UBERON:0002336 | 94.32 | gold quality |
| mucosa of stomach | UBERON:0001199 | 93.39 | gold quality |
| endometrium | UBERON:0001295 | 93.27 | gold quality |
| body of pancreas | UBERON:0001150 | 92.56 | gold quality |
| tonsil | UBERON:0002372 | 92.43 | gold quality |
| bone marrow cell | CL:0002092 | 91.76 | gold quality |
| adrenal tissue | UBERON:0018303 | 91.33 | gold quality |
| ventricular zone | UBERON:0003053 | 91.30 | gold quality |
| pancreas | UBERON:0001264 | 90.99 | gold quality |
| uterine cervix | UBERON:0000002 | 90.97 | gold quality |
| primary visual cortex | UBERON:0002436 | 90.87 | gold quality |
| ovary | UBERON:0000992 | 90.78 | gold quality |
| right uterine tube | UBERON:0001302 | 90.75 | gold quality |
| pituitary gland | UBERON:0000007 | 90.72 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 90.68 | gold quality |
| urinary bladder | UBERON:0001255 | 90.66 | gold quality |
| thyroid gland | UBERON:0002046 | 90.63 | gold quality |
| left ovary | UBERON:0002119 | 90.55 | gold quality |
| adenohypophysis | UBERON:0002196 | 90.48 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 90.42 | gold quality |
| right ovary | UBERON:0002118 | 90.41 | gold quality |
| endocervix | UBERON:0000458 | 90.38 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 90.32 | gold quality |
| cortex of kidney | UBERON:0001225 | 90.26 | gold quality |
| gall bladder | UBERON:0002110 | 90.13 | gold quality |
| sural nerve | UBERON:0015488 | 90.12 | gold quality |
| fundus of stomach | UBERON:0001160 | 90.10 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 90.03 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 8.27 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
161 targeting KRIT1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-656-3P | 100.00 | 72.15 | 2788 |
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-LET-7F-2-3P | 99.98 | 70.98 | 2588 |
| HSA-MIR-1185-1-3P | 99.98 | 71.04 | 2593 |
| HSA-MIR-1185-2-3P | 99.98 | 71.04 | 2593 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-3658 | 99.96 | 73.87 | 4379 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
Literature-anchored findings (GeneRIF, showing 40)
- Experimentally determined additional 5’ UTR variants and additional mutations (in CCM1 study families) in coding exons that lead to frameshifts and premature truncations in the protein. (PMID:11161805)
- Experimentally determined additional 5’ UTR alternatively spliced variants. Determined gene contains 20 exons. (PMID:11342228)
- KRIT1/CCM1 mutation in a patient with retinal and cerebral cavernous angiomas. (PMID:11831930)
- Integrin-binding protein also interacts with Krit 1 protein, cause of CCM1. (ICAP-1, integrin cytoplasmic domain-associated protein 1) (PMID:11854171)
- In familial CCM1 samples, two new Krit1 mutations have been reported in four new upstream exons and six additional mutations have been discovered in the previously identified exons, demonstrating a mutation frequency of 47% in the 27 families studied. (PMID:11914398)
- RNA analysis reveals that two point mutations actually activate cryptic splice-donor sites, causing aberrant splicing and leading to a frameshift and protein truncation (PMID:11941540)
- Experimentally determined alternatively spliced variants in the 5’ coding region that alter the open reading frame and lead to premature translation termination codons. Determined that the 3’ UTR is larger than previously found. (PMID:12172908)
- Krit1 mRNA expression in adult tissues (PMID:12204286)
- Mutations in Krit1 are associated with familial cerebral cavernous malformations, but seldom a cause of sporadic cavernomas (PMID:12682320)
- Identification of a novel KRIT1 mutation in an Italian family with cerebral cavernous malformation by the protein truncation test. (PMID:12810002)
- We report a mutation causing a premature termination triplet in exon 17 of the Krit1 gene in a family with diagnoses of cerebral cavernous angioma (PMID:12877753)
- KRIT1 is also present in cells and structures integral to the cerebral angiogenesis and formation of the blood-brain barrier, namely, endothelial cells and astrocytic foot processes, as well as pyramidal neurons in the cerebral cortex. (PMID:15046662)
- The CCM1 gene was screened in 35 sporadic cases with either single or multiple CCM. It was found that 29% of the individuals with multiple CCM have a CCM1 mutation, whereas cases with only one malformation have none (PMID:15079030)
- biallelic CCM1 somatic and germ line truncating mutation identification strongly supports the “two-hit” mechanism in this cerebral cavernous malformation lesion (PMID:15718512)
- KRIT1, Malcavernin, and PDCD10 are differentially expressed in cerebral venous malformations and cerebral cavernous malformations (PMID:16239636)
- CCM1 and CCM2 have similar expression patterns during development and are involved in the same pathway important for central nervous system vascular development (PMID:16373645)
- Results confirm the conclusion that KRIT1 haploinsufficiency may be the underlying mechanism of cerebral cavernous malformations. (PMID:16529293)
- SNX17 has a role in the indicated KRIT1 function in cell adhesion processes by integrin signaling (PMID:16712798)
- Five percent of patients with familial cerebral cavernomas have retinal cavernomas. These lesions are clinically asymptomatic. They can be associated with any of the 3 cerebral cavernous malformation genes. (PMID:16769843)
- Two new mutations in the KRIT1 gene in two Italian families affected by cerebral cavernous malformations. (PMID:17043900)
- Mutations in CCM1/KRIT1 may be found in asymptomatic patients with retinal cavernous hemangioma. (PMID:17148043)
- Krit1 interacts with malcavernin and may shuttle it through the nucleus via nuclear export signals, thereby regulating cellular function. (PMID:17290187)
- we found a novel CCM1 gene mutation (Q66X) in a family with apparently asymptomatic old-aged mutation carriers and patients who either had skin angiomas alone or the full association of cerebral, spinal, and skin lesions (PMID:17440989)
- Three novel and 2 described mutations were found in KRIT1. The families included 33 KRIT1 mutation carriers, 57.6% of whom had no symptoms. (PMID:17562932)
- Rap1 increases KRIT-1 targeting to endothelial cell-cell junctions where it suppresses stress fibers and stabilizes junctional integrity. (PMID:17954608)
- data are in agreement with a loss-of-function mechanism for CCM mutations, uncover an N-terminal CCM2 domain required for CCM1 binding, and demonstrate full-length CCM2 as the essential core protein in the CCM1/CCM2/CCM3 complex (PMID:18300272)
- Krit1 and integrin cytoplasmic domain-associated protein-1 alpha (icap1alpha) act concordantly to play a critical role in beta 1-integrin-mediated cell proliferation. (PMID:18812969)
- Biallelic germline and somatic mutations were identified in CCM1, CCM2 or PDCD10 from all forms of inherited cerebral cavernous malformations. (PMID:19088123)
- Complete localized loss of either CCM1, CCM2 or CCM3 protein expression depend on the inherited mutation in cerebral cavernous malformations. (PMID:19088124)
- Sequencing of KRIT1 identified a novel frameshift mutation in exon 15 (c.1561delC or p.Leu551X) which cosegregated with the phenotype observed in a family with cerebral cavernous malformations. (PMID:19092252)
- mutations in the KRIT1 gene may cause phenotypically heterogeneous cutaneous vascular lesions other than those previously described as HCCVMs. (PMID:19182478)
- The Multiplex Ligation-dependent Probe Amplification analysis revealed a new mutation, a heterozygous exon 9/10 deletion of Krit1, in the proband and in all affected family members. (PMID:19199464)
- CCM1 is the most frequently mutated gene in cutaneous vascular malformations-familial cerebral cavernous malformations patients. (PMID:19453802)
- C329X in KRIT1 is a founder mutation among CCM patients in Sardinia. (PMID:19454328)
- Familial CCM1 cavernous malformations are unlikely to be associated with developmental venous anomalies, and sporadic malformations have a high rate of association with them (PMID:19833796)
- We have identified a novel mutation in the KRIT1/CCM1 gene in a patient with both CCM and retinal cavernous hemangioma. (PMID:20306072)
- The KRIT1-CCM2 interaction regulates endothelial junctional stability and vascular barrier function by suppressing activation of the RhoA/ROCK signaling pathway. This pathway is dysregulated in human cerebral cavernous malformation endothelium. (PMID:20308363)
- Genetic variations could interfere with the proper CCM1/CCM2/CCM3 protein complex, thus explaining the observed clinical variability in cerebral cavernous malformations in a large family. (PMID:20419355)
- Frame shift mutation in KRIT1 gene is associated with cerebral and multiple spinal cavernous malformations. (PMID:20689144)
- We described the complete loss of 7q21.2 locus encompassing the KRIT1 gene and 4 flanking genes in a CCM family by using a dense set of 12 microsatellite markers. (PMID:20798775)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | krit1 | ENSDARG00000098916 |
| mus_musculus | Krit1 | ENSMUSG00000000600 |
| rattus_norvegicus | Krit1 | ENSRNOG00000007937 |
| caenorhabditis_elegans | kri-1 | WBGENE00013955 |
Paralogs (1): FRMD8 (ENSG00000126391)
Protein
Protein identifiers
Krev interaction trapped protein 1 — O00522 (reviewed: O00522)
Alternative names: Cerebral cavernous malformations 1 protein
All UniProt accessions (20): A0A0C4DG23, A0A8I5KQD8, A0A8I5KQH3, A0A8I5KRK7, A0A8I5KUF9, A0A8I5KVW5, O00522, A0A8I5KVY1, A0A8I5KVY4, A0A8I5KW41, A0A8I5KWG2, A0A8I5KX77, A4D1F7, C9J718, C9JD43, C9JEW7, C9JF32, C9JIY2, C9JJM9, C9JXI9
UniProt curated annotations — full annotation on UniProt →
Function. Component of the CCM signaling pathway which is a crucial regulator of heart and vessel formation and integrity. Negative regulator of angiogenesis. Inhibits endothelial proliferation, apoptosis, migration, lumen formation and sprouting angiogenesis in primary endothelial cells. Promotes AKT phosphorylation in a NOTCH-dependent and independent manner, and inhibits ERK1/2 phosphorylation indirectly through activation of the DELTA-NOTCH cascade. Acts in concert with CDH5 to establish and maintain correct endothelial cell polarity and vascular lumen and these effects are mediated by recruitment and activation of the Par polarity complex and RAP1B. Required for the localization of phosphorylated PRKCZ, PARD3, TIAM1 and RAP1B to the cell junction, and cell junction stabilization. Plays a role in integrin signaling via its interaction with ITGB1BP1; this prevents the interaction between ITGB1 and ITGB1BP1. Microtubule-associated protein that binds to phosphatidylinositol 4,5-bisphosphate (PIP2)-containing membranes in a GTP-bound RAP1-dependent manner. Plays an important role in the maintenance of the intracellular reactive oxygen species (ROS) homeostasis to prevent oxidative cellular damage. Regulates the homeostasis of intracellular ROS through an antioxidant pathway involving FOXO1 and SOD2. Facilitates the down-regulation of cyclin-D1 (CCND1) levels required for cell transition from proliferative growth to quiescence by preventing the accumulation of intracellular ROS through the modulation of FOXO1 and SOD2 levels. May play a role in the regulation of macroautophagy through the down-regulation of the mTOR pathway.
Subunit / interactions. Interacts with CDH5. Found in a complex, at least composed of ITGB1BP1, KRIT1 and RAP1A. Interacts (via C-terminus FERM domain) with RAP1A (active GTP-bound form preferentially); the interaction does not induce the opening conformation of KRIT1. Interacts (via FERM domain) with RAP1B. Interacts (via N-terminus NPXY motif) with ITGB1BP1; the interaction induces the opening conformation of KRIT1 and competes with ITGB1 for ITGB1BP1 interaction. Interacts with HEG1 and CCM2; greatly facilitates CCM2-binding to HEG1. Associates (via N-terminus and C-terminus regions) with microtubules; the interaction is inhibited in presence of ITGB1BP1 and active GTP-bound RAP1A.
Subcellular location. Cytoplasm. Cytoskeleton. Cell membrane. Cell junction.
Tissue specificity. Low levels in brain. Very weak expression found in heart and muscle.
Disease relevance. Cerebral cavernous malformations 1 (CCM1) [MIM:116860] A form of cerebral cavernous malformations, a congenital vascular anomaly of the central nervous system that can result in hemorrhagic stroke, seizures, recurrent headaches, and focal neurologic deficits. The lesions are characterized by grossly enlarged blood vessels consisting of a single layer of endothelium and without any intervening neural tissue, ranging in diameter from a few millimeters to several centimeters. CCM1 inheritance is autosomal dominant. The disease is caused by variants affecting the gene represented in this entry.
Domain organisation. The FERM domain mediates binding to RAP1A and RAP1B and is necessary for binding to phosphatidylinositol 4,5-bisphosphate (PIP2). The N-terminal domain has structural similarity to the nudix hydrolase domain, despite the absence of a nudix box and low sequence similarity with nudix hydrolase domains. The N-terminus and the C-terminus part associate together via the NPAY binding motif and adopt a lose conformation that is disrupted by ITGB1BP1, but not by RAP1A. Contains 4 ANK repeats that precede the FERM domain.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| O00522-1 | 1 | yes |
| O00522-2 | 2 | |
| O00522-3 | 3 |
RefSeq proteins (34): NP_001013424, NP_001337598, NP_001337599, NP_001337600, NP_001337601, NP_001337602, NP_001337603, NP_001337604, NP_001337605, NP_001337606, NP_001337607, NP_001337608, NP_001337609, NP_001337610, NP_001337611, NP_001337612, NP_001337613, NP_001337614, NP_001337615, NP_001337616, NP_001337617, NP_001337618, NP_001337619, NP_001337620, NP_001337621, NP_001337622, NP_001337623, NP_001337624, NP_001337625, NP_001337626, NP_004903, NP_919436, NP_919437, NP_919438 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000299 | FERM_domain | Domain |
| IPR002110 | Ankyrin_rpt | Repeat |
| IPR011993 | PH-like_dom_sf | Homologous_superfamily |
| IPR014352 | FERM/acyl-CoA-bd_prot_sf | Homologous_superfamily |
| IPR019748 | FERM_central | Domain |
| IPR019749 | Band_41_domain | Domain |
| IPR032022 | NUDIX | Domain |
| IPR035963 | FERM_2 | Homologous_superfamily |
| IPR036770 | Ankyrin_rpt-contain_sf | Homologous_superfamily |
| IPR041791 | KRIT1_FERM_C | Domain |
| IPR043058 | NUDIX_sf | Homologous_superfamily |
| IPR051594 | KRIT1/FRMD8 | Family |
| IPR056485 | ARM_KRIT1 | Domain |
| IPR057096 | KRIT1_FRMD8_FERM_C | Domain |
Pfam: PF00373, PF16705, PF24521, PF24522
UniProt features (90 total): helix 31, strand 22, mutagenesis site 14, turn 7, repeat 4, sequence conflict 3, region of interest 3, splice variant 2, sequence variant 2, chain 1, domain 1
Structure
Experimental structures (PDB)
15 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 4HDO | X-RAY DIFFRACTION | 1.67 |
| 4JIF | X-RAY DIFFRACTION | 1.7 |
| 6OQ4 | X-RAY DIFFRACTION | 1.75 |
| 6OQ3 | X-RAY DIFFRACTION | 1.85 |
| 6UZK | X-RAY DIFFRACTION | 1.92 |
| 4DXA | X-RAY DIFFRACTION | 1.95 |
| 4HDQ | X-RAY DIFFRACTION | 1.95 |
| 8SU8 | X-RAY DIFFRACTION | 2.01 |
| 8T09 | X-RAY DIFFRACTION | 2.15 |
| 8T7V | X-RAY DIFFRACTION | 2.25 |
| 3U7D | X-RAY DIFFRACTION | 2.49 |
| 4DX8 | X-RAY DIFFRACTION | 2.54 |
| 5D68 | X-RAY DIFFRACTION | 2.91 |
| 4TKN | X-RAY DIFFRACTION | 3 |
| 9PVG | X-RAY DIFFRACTION | 3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O00522-F1 | 83.01 | 0.57 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Mutagenesis-validated functional residues (14):
| Position | Phenotype |
|---|---|
| 47–50 | reduces interaction with microtubules, but not with itgb1bp1. |
| 176 | strongly reduces itgb1bp1 binding; when associated with d-182. |
| 179 | strongly reduces itgb1bp1 binding; when associated with a-179. |
| 182 | strongly reduces itgb1bp1 binding; when associated with d-176. |
| 185 | strongly reduces itgb1bp1 binding; when associated with a-179. |
| 192–195 | reduces interaction with itgb1bp1. |
| 192 | reduces itgb1bp1 binding; when associated with a-195. |
| 195 | reduces itgb1bp1 binding; when associated with a-192. |
| 430 | impairs interaction with rap1b. |
| 432 | impairs interaction with rap1b. |
| 452 | 40-fold-reduced affinity for rap1a. |
| 452 | impairs interaction with rap1b. |
| 717 | strongly reduced affinity for heg1; when associated with a-721. |
| 721 | strongly reduced affinity for heg1; when associated with a-717. |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 298 (showing top):
GSE18804_SPLEEN_MACROPHAGE_VS_BRAIN_TUMORAL_MACROPHAGE_UP, GOBP_NEGATIVE_REGULATION_OF_EPITHELIAL_CELL_PROLIFERATION, BORCZUK_MALIGNANT_MESOTHELIOMA_UP, GOBP_EPITHELIUM_DEVELOPMENT, WANG_CLIM2_TARGETS_UP, GGTGTGT_MIR329, GOBP_ESTABLISHMENT_OR_MAINTENANCE_OF_CELL_POLARITY, TGACCTY_ERR1_Q2, MORF_HDAC2, GGGTGGRR_PAX4_03, MORF_TERF1, GOBP_ESTABLISHMENT_OF_CELL_POLARITY, GOBP_NEGATIVE_REGULATION_OF_MULTICELLULAR_ORGANISMAL_PROCESS, GOBP_CELL_REDOX_HOMEOSTASIS, GOBP_REGULATION_OF_ENDOTHELIAL_CELL_MIGRATION
GO Biological Process (13): angiogenesis (GO:0001525), negative regulation of endothelial cell proliferation (GO:0001937), endothelium development (GO:0003158), small GTPase-mediated signal transduction (GO:0007264), negative regulation of endothelial cell migration (GO:0010596), negative regulation of angiogenesis (GO:0016525), integrin activation (GO:0033622), cell redox homeostasis (GO:0045454), regulation of angiogenesis (GO:0045765), regulation of establishment of cell polarity (GO:2000114), negative regulation of endothelial cell apoptotic process (GO:2000352), negative regulation of developmental process (GO:0051093), regulation of multicellular organismal development (GO:2000026)
GO Molecular Function (4): phosphatidylinositol-4,5-bisphosphate binding (GO:0005546), microtubule binding (GO:0008017), GTPase regulator activity (GO:0030695), protein binding (GO:0005515)
GO Cellular Component (8): obsolete extracellular space (GO:0005615), cytoplasm (GO:0005737), cytoskeleton (GO:0005856), plasma membrane (GO:0005886), cell-cell junction (GO:0005911), protein-containing complex (GO:0032991), membrane (GO:0016020), anchoring junction (GO:0070161)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| angiogenesis | 2 |
| regulation of developmental process | 2 |
| cellular anatomical structure | 2 |
| blood vessel morphogenesis | 1 |
| anatomical structure formation involved in morphogenesis | 1 |
| endothelial cell proliferation | 1 |
| regulation of endothelial cell proliferation | 1 |
| negative regulation of epithelial cell proliferation | 1 |
| epithelium development | 1 |
| intracellular signaling cassette | 1 |
| regulation of endothelial cell migration | 1 |
| negative regulation of cell migration | 1 |
| endothelial cell migration | 1 |
| regulation of angiogenesis | 1 |
| negative regulation of blood vessel morphogenesis | 1 |
| protein-containing complex assembly | 1 |
| cellular homeostasis | 1 |
| regulation of anatomical structure morphogenesis | 1 |
| regulation of vasculature development | 1 |
| establishment of cell polarity | 1 |
| regulation of establishment or maintenance of cell polarity | 1 |
| negative regulation of apoptotic process | 1 |
| endothelial cell apoptotic process | 1 |
| regulation of endothelial cell apoptotic process | 1 |
| developmental process | 1 |
| negative regulation of biological process | 1 |
| multicellular organism development | 1 |
| regulation of multicellular organismal process | 1 |
| phosphatidylinositol phosphate binding | 1 |
| phosphatidylinositol bisphosphate binding | 1 |
| tubulin binding | 1 |
| GTPase activity | 1 |
| nucleoside-triphosphatase regulator activity | 1 |
| binding | 1 |
| intracellular anatomical structure | 1 |
| intracellular membraneless organelle | 1 |
| membrane | 1 |
| cell periphery | 1 |
| anchoring junction | 1 |
| cellular_component | 1 |
Protein interactions and networks
STRING
1182 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| KRIT1 | CCM2 | Q9BSQ5 | 998 |
| KRIT1 | RAP1A | P10113 | 996 |
| KRIT1 | PDCD10 | Q9BUL8 | 996 |
| KRIT1 | ITGB1BP1 | O14713 | 992 |
| KRIT1 | SNX17 | Q15036 | 967 |
| KRIT1 | HEG1 | Q9ULI3 | 966 |
| KRIT1 | STK25 | O00506 | 847 |
| KRIT1 | MAP3K3 | Q99759 | 821 |
| KRIT1 | CDH5 | P33151 | 773 |
| KRIT1 | RAP1B | P09526 | 768 |
| KRIT1 | RASIP1 | Q5U651 | 754 |
| KRIT1 | RAP2A | P10114 | 727 |
| KRIT1 | RHOA | P06749 | 709 |
| KRIT1 | ACVRL1 | P37023 | 706 |
| KRIT1 | MYL2 | P10916 | 700 |
IntAct
45 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CCM2 | KRIT1 | psi-mi:“MI:0915”(physical association) | 0.960 |
| KRIT1 | CCM2 | psi-mi:“MI:0915”(physical association) | 0.960 |
| KRIT1 | CCM2 | psi-mi:“MI:0914”(association) | 0.960 |
| KRIT1 | CCM2 | psi-mi:“MI:0407”(direct interaction) | 0.960 |
| CCM2 | KRIT1 | psi-mi:“MI:0914”(association) | 0.960 |
| ITGB1BP1 | KRIT1 | psi-mi:“MI:0915”(physical association) | 0.740 |
| KRIT1 | ITGB1BP1 | psi-mi:“MI:0915”(physical association) | 0.740 |
| HEG1 | KRIT1 | psi-mi:“MI:0915”(physical association) | 0.730 |
| HEG1 | KRIT1 | psi-mi:“MI:0407”(direct interaction) | 0.730 |
| KRIT1 | UBE2K | psi-mi:“MI:0915”(physical association) | 0.560 |
| TLNRD1 | KRIT1 | psi-mi:“MI:0914”(association) | 0.530 |
| CCM2 | KRIT1 | psi-mi:“MI:0914”(association) | 0.500 |
BioGRID (63): KRIT1 (Affinity Capture-RNA), RAP1A (Two-hybrid), KRIT1 (Two-hybrid), KRIT1 (Two-hybrid), CCM2 (Two-hybrid), ITGB1BP1 (Two-hybrid), KRIT1 (Affinity Capture-MS), ITGB1BP1 (Affinity Capture-MS), HEG1 (Affinity Capture-MS), SLC34A2 (Affinity Capture-MS), UBFD1 (Affinity Capture-MS), KRIT1 (Synthetic Lethality), UBE2K (Two-hybrid), ITGB1BP1 (Two-hybrid), ITGB1BP1 (Reconstituted Complex)
ESM2 similar proteins: A0A1B0GW35, A6QNM3, B0R034, B1ANS9, B9EK06, D2KC46, D3ZY60, F1MS15, F1P065, F1REV3, O00522, O15091, O75747, P10911, P58069, Q008S8, Q14449, Q14D04, Q15283, Q32NR9, Q45GW3, Q4R366, Q4R6T7, Q5H9U9, Q5K651, Q5PQS3, Q5XGX5, Q5XIZ9, Q5ZLD2, Q60862, Q63713, Q69Z37, Q6DCF6, Q6S5J6, Q6TNJ1, Q75PQ8, Q80W71, Q86VD1, Q86YR7, Q8C5W4
Diamond homologs: F1REV3, O00522, Q10728, Q6S5J6, Q6TNJ1, Q9DBR7, A2AQH4, A4II29, B2RR83, G3I6Z6, O13987, O14974, O60237, P46531, P83757, Q01705, Q02979, Q03017, Q07008, Q0VC93, Q18297, Q1RJ94, Q28FJ2, Q337A0, Q3SX00, Q3UES3, Q3UMT1, Q3V096, Q4FE45, Q4JHE0, Q5H9F3, Q5I1X5, Q5R746, Q5R8C8, Q5U5A6, Q61982, Q6DRG7, Q6KAE5, Q7T3X9, Q7T3Y0
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
833 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 279 |
| Likely pathogenic | 65 |
| Uncertain significance | 265 |
| Likely benign | 102 |
| Benign | 22 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1068679 | NM_194454.3(KRIT1):c.1333C>T (p.Gln445Ter) | Pathogenic |
| 1068705 | NM_194454.3(KRIT1):c.1616T>G (p.Leu539Ter) | Pathogenic |
| 1069273 | NM_194454.3(KRIT1):c.1297del (p.Ser433fs) | Pathogenic |
| 1070438 | NM_194454.3(KRIT1):c.1446dup (p.His483fs) | Pathogenic |
| 1070522 | NM_194454.3(KRIT1):c.206T>A (p.Leu69Ter) | Pathogenic |
| 1071790 | NM_194454.3(KRIT1):c.1099dup (p.His367fs) | Pathogenic |
| 1071796 | NM_194454.3(KRIT1):c.382G>T (p.Gly128Ter) | Pathogenic |
| 1072402 | NC_000007.13:g.(?91829918)(91851387_?)del | Pathogenic |
| 1072403 | NC_000007.13:g.(?91863743)(91871469_?)del | Pathogenic |
| 1073009 | NM_194454.3(KRIT1):c.1162C>T (p.Gln388Ter) | Pathogenic |
| 1074210 | NM_194454.3(KRIT1):c.250C>T (p.Gln84Ter) | Pathogenic |
| 1074229 | NM_194454.3(KRIT1):c.2113A>T (p.Lys705Ter) | Pathogenic |
| 1074264 | NC_000007.13:g.(?91851196)(91871469_?)del | Pathogenic |
| 1074265 | NC_000007.13:g.(?91866961)(91871469_?)del | Pathogenic |
| 1074639 | NM_194454.3(KRIT1):c.2049T>G (p.Tyr683Ter) | Pathogenic |
| 1074766 | NM_194454.3(KRIT1):c.1389_1390del (p.Ile463fs) | Pathogenic |
| 1075474 | NM_194454.3(KRIT1):c.1980_1981delinsGT (p.Gly661Ter) | Pathogenic |
| 1075800 | NM_194454.3(KRIT1):c.1212G>A (p.Trp404Ter) | Pathogenic |
| 1187060 | NM_194454.3(KRIT1):c.1146+1G>T | Pathogenic |
| 1252052 | NM_194454.3(KRIT1):c.992A>G (p.Tyr331Cys) | Pathogenic |
| 1254168 | NM_194454.3(KRIT1):c.699del (p.Leu233fs) | Pathogenic |
| 1284973 | NM_194454.3(KRIT1):c.1166del (p.Gly389fs) | Pathogenic |
| 1285155 | NM_194454.3(KRIT1):c.1412-1G>C | Pathogenic |
| 1285206 | NM_194454.3(KRIT1):c.1287del (p.Ser430fs) | Pathogenic |
| 1299386 | NM_194454.3(KRIT1):c.1664C>T (p.Ala555Val) | Pathogenic |
| 1320113 | NM_194454.3(KRIT1):c.1444C>T (p.Gln482Ter) | Pathogenic |
| 1331022 | NM_194454.3(KRIT1):c.1287dup (p.Ser430fs) | Pathogenic |
| 1333479 | NM_194454.3(KRIT1):c.1097del (p.Gly366fs) | Pathogenic |
| 1355783 | NC_000007.14:g.92201424dup | Pathogenic |
| 1358522 | NM_194454.3(KRIT1):c.2100_2101dup (p.Ser701fs) | Pathogenic |
SpliceAI
3108 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 7:92213886:GCTTA:G | donor_loss | 1.0000 |
| 7:92213887:CTTA:C | donor_loss | 1.0000 |
| 7:92213888:TTA:T | donor_loss | 1.0000 |
| 7:92213889:TAC:T | donor_loss | 1.0000 |
| 7:92213975:CTTCA:C | acceptor_gain | 1.0000 |
| 7:92213978:CA:C | acceptor_gain | 1.0000 |
| 7:92213980:C:CC | acceptor_gain | 1.0000 |
| 7:92214609:A:AC | donor_gain | 1.0000 |
| 7:92214610:C:CA | donor_gain | 1.0000 |
| 7:92214779:T:C | acceptor_gain | 1.0000 |
| 7:92221915:T:TA | donor_gain | 1.0000 |
| 7:92221931:CATCT:C | donor_gain | 1.0000 |
| 7:92222689:T:C | acceptor_gain | 1.0000 |
| 7:92222691:A:C | acceptor_gain | 1.0000 |
| 7:92222693:A:C | acceptor_gain | 1.0000 |
| 7:92222820:A:AC | donor_gain | 1.0000 |
| 7:92222821:C:CC | donor_gain | 1.0000 |
| 7:92222821:CTGA:C | donor_gain | 1.0000 |
| 7:92222821:CTGAG:C | donor_gain | 1.0000 |
| 7:92222975:CATA:C | acceptor_gain | 1.0000 |
| 7:92222977:TA:T | acceptor_gain | 1.0000 |
| 7:92222979:C:CC | acceptor_gain | 1.0000 |
| 7:92225714:TCTTA:T | donor_loss | 1.0000 |
| 7:92225715:CTTA:C | donor_loss | 1.0000 |
| 7:92225716:TTA:T | donor_loss | 1.0000 |
| 7:92225717:TACTG:T | donor_loss | 1.0000 |
| 7:92225718:A:AC | donor_gain | 1.0000 |
| 7:92225718:ACTGG:A | donor_loss | 1.0000 |
| 7:92225719:C:A | donor_loss | 1.0000 |
| 7:92225719:C:CT | donor_gain | 1.0000 |
AlphaMissense
4868 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 7:92234903:A:C | N250K | 1.000 |
| 7:92234903:A:T | N250K | 1.000 |
| 7:92237684:A:T | V113D | 1.000 |
| 7:92242089:C:G | R16P | 1.000 |
| 7:92213214:A:G | L669P | 0.999 |
| 7:92213346:A:G | F625S | 0.999 |
| 7:92221935:T:A | R510S | 0.999 |
| 7:92221935:T:G | R510S | 0.999 |
| 7:92221936:C:A | R510I | 0.999 |
| 7:92222006:A:G | W487R | 0.999 |
| 7:92222006:A:T | W487R | 0.999 |
| 7:92222044:A:G | L474P | 0.999 |
| 7:92222843:A:G | W464R | 0.999 |
| 7:92222843:A:T | W464R | 0.999 |
| 7:92222845:A:T | I463K | 0.999 |
| 7:92222951:C:G | D428H | 0.999 |
| 7:92222962:A:T | I424K | 0.999 |
| 7:92226551:A:G | L374P | 0.999 |
| 7:92226584:G:T | A363D | 0.999 |
| 7:92226587:G:T | A362D | 0.999 |
| 7:92226599:G:T | P358H | 0.999 |
| 7:92226616:A:C | N352K | 0.999 |
| 7:92226616:A:T | N352K | 0.999 |
| 7:92234451:G:C | C329W | 0.999 |
| 7:92234452:C:T | C329Y | 0.999 |
| 7:92234453:A:G | C329R | 0.999 |
| 7:92234467:G:C | P324R | 0.999 |
| 7:92234467:G:T | P324H | 0.999 |
| 7:92234474:A:G | W322R | 0.999 |
| 7:92234474:A:T | W322R | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000131072 (7:92221064 C>T), RS1000153086 (7:92236254 G>C), RS1000242654 (7:92221478 T>C), RS1000300337 (7:92199006 T>C,G), RS1000384813 (7:92233763 C>A), RS1000449073 (7:92227981 C>A,T), RS1000505571 (7:92236642 A>G), RS1000513814 (7:92243940 T>A,C), RS1000539467 (7:92215068 G>A), RS1000602788 (7:92233595 C>T), RS1000635953 (7:92228253 G>A,C), RS1000648626 (7:92246102 G>C), RS1000756633 (7:92203777 C>G,T), RS1000786709 (7:92202789 T>C), RS1000843107 (7:92209609 T>C)
Disease associations
OMIM: gene MIM:604214 | disease phenotypes: MIM:116860, MIM:600419
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| cerebral cavernous malformation 1 | Definitive | Autosomal dominant |
| famililal cerebral cavernous malformations | Supportive | Autosomal dominant |
Mondo (6): cerebral cavernous malformation (MONDO:0000820), cerebral cavernous malformation 1 (MONDO:0020724), angiokeratoma corporis diffusum with arteriovenous fistulas (MONDO:0010885), famililal cerebral cavernous malformations (MONDO:0031037), cavernous hemangioma (MONDO:0003155), vascular dementia (MONDO:0004648)
Orphanet (2): Familial cerebral cavernous malformation (Orphanet:221061), NON RARE IN EUROPE: Cerebral cavernous malformations (Orphanet:164)
HPO phenotypes
33 total (30 of 33 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000951 | Abnormality of the skin |
| HP:0001028 | Hemangioma |
| HP:0001048 | Cavernous hemangioma |
| HP:0001250 | Seizure |
| HP:0001324 | Muscle weakness |
| HP:0001342 | Cerebral hemorrhage |
| HP:0002170 | Intracranial hemorrhage |
| HP:0002315 | Headache |
| HP:0002514 | Cerebral calcification |
| HP:0002516 | Increased intracranial pressure |
| HP:0002572 | Episodic vomiting |
| HP:0002650 | Scoliosis |
| HP:0002858 | Meningioma |
| HP:0003011 | Abnormality of the musculature |
| HP:0003401 | Paresthesia |
| HP:0003829 | Typified by incomplete penetrance |
| HP:0006576 | Hepatic vascular malformations |
| HP:0007797 | Developmental retinal vascular malformation |
| HP:0007872 | Choroidal hemangioma |
| HP:0009588 | Vestibular schwannoma |
| HP:0009592 | Astrocytoma |
| HP:0010512 | Adrenal calcification |
| HP:0011276 | Vascular skin abnormality |
| HP:0011513 | Retinal cavernous hemangioma |
| HP:0012721 | Venous malformation |
| HP:0012748 | Focal T2 hyperintense brainstem lesion |
| HP:0012749 | Focal T2 hypointense brainstem lesion |
| HP:0030430 | Neuroma |
| HP:0033522 | Cerebral cavernous malformation |
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006993_10 | Hippocampal volume in Alzheimer’s disease dementia | 2.000000e-07 |
| GCST008526_36 | Coffee consumption | 1.000000e-07 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0005035 | hippocampal volume |
| EFO:0006781 | coffee consumption measurement |
MeSH disease descriptors (3)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D015140 | Dementia, Vascular | C10.228.140.300.400; C10.228.140.300.510.800.500; C10.228.140.380.230; C10.228.140.695.500; C14.907.137.126.372.500; C14.907.253.560.350.500; F03.615.400.350 |
| D006392 | Hemangioma, Cavernous | C04.557.645.375.385; C10.228.140.232.625; C14.907.454.385; C15.378.463.515.385 |
| C563940 | Angiokeratoma Corporis Diffusum with Arteriovenous Fistulas (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
42 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Air Pollutants | affects cotreatment, increases abundance, increases expression, decreases expression | 3 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | decreases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| FR900359 | affects phosphorylation | 1 |
| methylmercuric chloride | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| alpha-pinene | affects cotreatment, increases expression, increases abundance | 1 |
| bisphenol A | increases expression | 1 |
| beta-lapachone | decreases expression, increases expression | 1 |
| sodium arsenite | decreases expression | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| methacrylaldehyde | increases abundance, affects cotreatment, increases expression | 1 |
| beta-methylcholine | affects expression | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| pentanal | decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| CGP 52608 | increases reaction, affects binding | 1 |
| K 7174 | increases expression | 1 |
| jinfukang | decreases expression | 1 |
| Bortezomib | increases expression | 1 |
| Irinotecan | decreases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Acrolein | affects cotreatment, increases expression, increases abundance | 1 |
| Atrazine | decreases expression | 1 |
| Coal | decreases expression, increases abundance | 1 |
| Cocaine | increases expression | 1 |
| Diethylhexyl Phthalate | decreases expression | 1 |
| Folic Acid | decreases expression | 1 |
Cellosaurus cell lines
1 cell lines: 1 induced pluripotent stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_C1V1 | NFHHMUi001-A | Induced pluripotent stem cell | Male |
Clinical trials (associated diseases)
108 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00165763 | PHASE4 | COMPLETED | Efficacy and Safety of Donepezil Hydrochloride (Aricept) in Vascular Dementia |
| NCT00847860 | PHASE4 | COMPLETED | Cilostazol Verse Asprin for Vascular Dementia in Poststroke Patients With White Matter Lesions |
| NCT00947531 | PHASE4 | COMPLETED | A Clinical Trial to Evaluate the Safety and Efficacy of 20 ml Cerebrolysin in Patients With Vascular Dementia |
| NCT00950430 | PHASE4 | ENROLLING_BY_INVITATION | Imaging of Brain Amyloid Plaques in the Aging Population |
| NCT00099216 | PHASE3 | COMPLETED | Efficacy and Safety of Rivastigmine Capsules in Patients With Probable Vascular Dementia |
| NCT00130338 | PHASE3 | COMPLETED | Rivastigmine Capsules in Patients With Probable Vascular Dementia |
| NCT00209456 | PHASE3 | COMPLETED | Dopamine Transporter Scintigraphy Imaging (DAT-Imaging) in Patients With Lewy Body Dementia |
| NCT00249158 | PHASE3 | COMPLETED | A Study of the Effectiveness and Safety of Risperidone in the Treatment of Behavioral Disturbances in Patients With Dementia |
| NCT00261573 | PHASE3 | COMPLETED | A Study of the Safety and Effectiveness of Galantamine Versus Placebo in the Treatment of Patients With Vascular Dementia or Mixed Dementia |
| NCT00621647 | PHASE3 | COMPLETED | Seroquel- Agitation Associated With Dementia |
| NCT02453932 | PHASE3 | COMPLETED | Efficacy and Safety of Tianzhi Granule in Mild to Moderate Vascular Dementia |
| NCT03682185 | PHASE3 | COMPLETED | The Healthy Patterns Sleep Study |
| NCT03789760 | PHASE3 | COMPLETED | The Clinical Trial of Chinese Herbal Medicine (SaiLuoTong) Capsule |
| NCT03804229 | PHASE3 | ACTIVE_NOT_RECRUITING | Efficacy and Safety of Butylphthalide Soft Capsule for the Treatment of Vascular Dementia |
| NCT03986424 | PHASE3 | COMPLETED | Local Study of Akatinol Memantine in VaD in Russia |
| NCT04552041 | PHASE3 | COMPLETED | Prospekta in the Treatment of Cognitive, Behavioral and Psychiatric Disorders in Patients With Vascular Dementia. |
| NCT03474614 | PHASE2 | TERMINATED | Effect of Oral Propranolol on mRNA Expresssion in Symptomatic Cavernous Malformation |
| NCT03589014 | PHASE2 | COMPLETED | Treat_CCM: Propranolol in Familial Cerebral Cavernous Malformation |
| NCT05085561 | PHASE2 | COMPLETED | The Symptomatic Cerebral Cavernous Malformation Trial of REC-994 |
| NCT01466543 | PHASE2 | UNKNOWN | Effect of Zydena (Udenafil) on Cerebral Blood Flow and Peripheral Blood Viscosity |
| NCT01475578 | PHASE2 | COMPLETED | Study of STA-1 Capsule in Patients With Vascular Dementia (Marrow-Sea Deficiency) |
| NCT01608217 | PHASE2 | COMPLETED | Delta-THC in Dementia |
| NCT01761227 | PHASE2 | COMPLETED | Efficacy and Safety of Fufangdanshen Tablets in Mild to Moderate Vascular Dementia |
| NCT01953705 | PHASE2 | UNKNOWN | n-3 PUFA for Vascular Cognitive Aging |
| NCT01965756 | PHASE2 | COMPLETED | Effect of Insulin Sensitizer Metformin on AD Biomarkers |
| NCT01978730 | PHASE2 | UNKNOWN | The Clinical Trial of Chinese Herbal Medicine SaiLuoTong Capsule |
| NCT02467413 | PHASE2 | WITHDRAWN | BAC in Patient With Alzheimer’s Disease or Vascular Dementia |
| NCT03230071 | PHASE2 | COMPLETED | Efficacy and Safety of TMBCZG in Mild to Moderate Vascular Dementia |
| NCT04109963 | PHASE2 | UNKNOWN | Trial of Remote Ischemic Pre-conditioning in Vascular Cognitive Impairment |
| NCT05371639 | PHASE2 | UNKNOWN | Efficacy and Safety of Tian Ma Bian Chun Zhi Gan Tablets in Mild to Moderate Vascular Dementia |
| NCT00783523 | PHASE1 | COMPLETED | Influence of MMP on Brain AVM Hemorrhage |
| NCT00457769 | PHASE1 | UNKNOWN | Aricept to Improve Functional Tasks in Vascular Dementia |
| NCT03702543 | PHASE1 | UNKNOWN | Managing Vascular Dementia Risk Factors With SymTrend |
| NCT04567745 | PHASE1 | COMPLETED | Automated Retinal Image Analysis System (EyeQuant) for Computation of Vascular Biomarkers |
| NCT01764451 | EARLY_PHASE1 | TERMINATED | Permeability MRI in Cerebral Cavernous Malformations Type 1 in New Mexico: Effects of Statins |
| NCT01764529 | Not specified | ACTIVE_NOT_RECRUITING | Modifiers of Disease Severity in Cerebral Cavernous Malformations |
| NCT03467295 | Not specified | UNKNOWN | Treatments and Outcomes of Untreated Cerebral Cavernous Malformations in CHina. |
| NCT03652181 | Not specified | COMPLETED | CASH (Cavernous Angiomas With Symptomatic Hemorrhage) Trial Readiness |
| NCT06983132 | Not specified | RECRUITING | Natural History of Familial Cerebral Cavernous Malformations: the CCM_Italia Cohort Study |
| NCT02603328 | PHASE1/PHASE2 | COMPLETED | Atorvastatin Treatment of Cavernous Angiomas With Symptomatic Hemorrhage Exploratory Proof of Concept (AT CASH EPOC) Trial |
Related Atlas pages
- Associated diseases: cerebral cavernous malformation 1, famililal cerebral cavernous malformations
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): angiokeratoma corporis diffusum with arteriovenous fistulas, cavernous hemangioma, cerebral cavernous malformation, cerebral cavernous malformation 1, famililal cerebral cavernous malformations, vascular dementia