KRT85
geneOn this page
Also known as Hb-5
Summary
KRT85 (keratin 85, HGNC:6462) is a protein-coding gene on chromosome 12q13.13, encoding Keratin, type II cuticular Hb5 (P78386).
The protein encoded by this gene is a member of the keratin gene family. As a type II hair keratin, it is a basic protein which heterodimerizes with type I keratins to form hair and nails. The type II hair keratins are clustered in a region of chromosome 12q13 and are grouped into two distinct subfamilies based on structure similarity. One subfamily, consisting of KRTHB1, KRTHB3, and KRTHB6, is highly related. The other less-related subfamily includes KRTHB2, KRTHB4, and KRTHB5.
Source: NCBI Gene 3891 — RefSeq curated summary.
At a glance
- Gene–disease (curated): ectodermal dysplasia 4, hair/nail type (Definitive, GenCC) — +1 more curated relationship
- GWAS associations: 2
- Clinical variants (ClinVar): 169 total — 1 pathogenic
- Phenotypes (HPO): 16
- Druggable target: yes
- MANE Select transcript:
NM_002283
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6462 |
| Approved symbol | KRT85 |
| Name | keratin 85 |
| Location | 12q13.13 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | Hb-5 |
| Ensembl gene | ENSG00000135443 |
| Ensembl biotype | protein_coding |
| OMIM | 602767 |
| Entrez | 3891 |
Gene structure
Transcript identifiers
Ensembl transcripts: 3 — 2 protein_coding, 1 retained_intron
ENST00000257901, ENST00000544265, ENST00000552537
RefSeq mRNA: 2 — MANE Select: NM_002283
NM_001300810, NM_002283
CCDS: CCDS73472, CCDS8824
Canonical transcript exons
ENST00000257901 — 9 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000919876 | 52360006 | 52361046 |
| ENSE00000919878 | 52362251 | 52362471 |
| ENSE00000919883 | 52364962 | 52365170 |
| ENSE00000919884 | 52366986 | 52367481 |
| ENSE00001613638 | 52362854 | 52362979 |
| ENSE00001701557 | 52361467 | 52361498 |
| ENSE00001760224 | 52364306 | 52364366 |
| ENSE00003530706 | 52363246 | 52363410 |
| ENSE00003610254 | 52364068 | 52364163 |
Expression profiles
Bgee: expression breadth broad, 100 present calls, max score 87.03.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0376 / max 38.5049, expressed in 8 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 131026 | 0.0376 | 8 |
Top tissues by expression
263 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| upper arm skin | UBERON:0004263 | 87.03 | gold quality |
| sperm | CL:0000019 | 80.03 | gold quality |
| male germ cell | CL:0000015 | 77.54 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 75.92 | silver quality |
| skin of hip | UBERON:0001554 | 68.17 | gold quality |
| hair follicle | UBERON:0002073 | 66.83 | gold quality |
| ileal mucosa | UBERON:0000331 | 65.31 | silver quality |
| upper leg skin | UBERON:0004262 | 62.34 | gold quality |
| decidua | UBERON:0002450 | 61.56 | silver quality |
| nipple | UBERON:0002030 | 60.04 | gold quality |
| buccal mucosa cell | CL:0002336 | 59.47 | gold quality |
| tibialis anterior | UBERON:0001385 | 58.57 | silver quality |
| periodontal ligament | UBERON:0008266 | 57.15 | gold quality |
| zone of skin | UBERON:0000014 | 54.00 | gold quality |
| deltoid | UBERON:0001476 | 52.45 | gold quality |
| pancreatic ductal cell | CL:0002079 | 51.86 | silver quality |
| skin of leg | UBERON:0001511 | 51.76 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 51.29 | silver quality |
| right lung | UBERON:0002167 | 51.22 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 50.98 | gold quality |
| skin of abdomen | UBERON:0001416 | 50.65 | gold quality |
| body of tongue | UBERON:0011876 | 50.32 | silver quality |
| quadriceps femoris | UBERON:0001377 | 50.29 | gold quality |
| oocyte | CL:0000023 | 50.06 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 49.79 | gold quality |
| vastus lateralis | UBERON:0001379 | 49.58 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 49.30 | gold quality |
| blood vessel layer | UBERON:0004797 | 49.29 | gold quality |
| cervix squamous epithelium | UBERON:0006922 | 49.20 | gold quality |
| olfactory bulb | UBERON:0002264 | 48.92 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 1.62 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
46 targeting KRT85, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-1193 | 100.00 | 65.93 | 529 |
| HSA-MIR-23C | 99.95 | 73.92 | 3192 |
| HSA-MIR-4731-5P | 99.89 | 67.23 | 2537 |
| HSA-MIR-605-3P | 99.88 | 69.22 | 1833 |
| HSA-MIR-369-3P | 99.85 | 70.52 | 2264 |
| HSA-MIR-4420 | 99.82 | 70.08 | 1624 |
| HSA-MIR-181B-2-3P | 99.81 | 70.06 | 1646 |
| HSA-MIR-181B-3P | 99.81 | 70.06 | 1646 |
| HSA-MIR-636 | 99.80 | 69.58 | 1500 |
| HSA-MIR-1299 | 99.77 | 71.24 | 2389 |
| HSA-MIR-4319 | 99.76 | 69.83 | 2586 |
| HSA-MIR-148A-3P | 99.74 | 73.77 | 1700 |
| HSA-MIR-148B-3P | 99.74 | 73.75 | 1700 |
| HSA-MIR-152-3P | 99.74 | 73.75 | 1703 |
| HSA-MIR-494-3P | 99.70 | 71.45 | 2795 |
| HSA-MIR-6716-5P | 99.56 | 68.62 | 1244 |
| HSA-MIR-4276 | 99.56 | 67.66 | 2514 |
| HSA-MIR-451B | 99.55 | 68.28 | 1380 |
| HSA-MIR-642A-5P | 99.51 | 65.10 | 1152 |
| HSA-MIR-203A-3P | 99.49 | 70.56 | 2806 |
| HSA-MIR-1275 | 99.47 | 67.90 | 2749 |
| HSA-MIR-125A-5P | 99.36 | 70.59 | 1640 |
| HSA-MIR-125B-5P | 99.36 | 70.36 | 1662 |
| HSA-MIR-1912-3P | 99.32 | 67.40 | 936 |
| HSA-MIR-4505 | 99.27 | 67.81 | 2678 |
| HSA-MIR-5787 | 99.22 | 67.86 | 2628 |
| HSA-MIR-10524-5P | 99.05 | 66.08 | 963 |
| HSA-MIR-1295B-5P | 99.03 | 67.50 | 810 |
| HSA-MIR-625-5P | 99.02 | 68.64 | 2031 |
| HSA-MIR-3194-3P | 98.83 | 66.22 | 1167 |
Literature-anchored findings (GeneRIF, showing 6)
- Direct evidence relating to the molecular pathogenesis of pure hair-nail ectodermal dysplasias with KRTHB5 gene mutation. (PMID:16525032)
- Transfected p65 induces transcriptional activation of Hb5. (PMID:18021261)
- crucial role of K85 in keratinization of hair and nails as shown by homozygous mutations in families (PMID:19865094)
- Our study confirms linkage of a variant clinical form of hair-nail ectodermal dysplasia to chromosome 12 without any mutation in the coding sequences of the KRTHB5 gene. (PMID:20409997)
- described for the first time KRT85 compound heterozygosity in caucasian patients, leading to pure hair and nail ectodermal dysplasia. Next generation sequencing molecular diagnosis allowed to confirm rapidly the diagnosis and to guide genetic counselling (PMID:31273852)
- De novo filament formation by human hair keratins K85 and K35 follows a filament development pattern distinct from cytokeratin filament networks. (PMID:33605551)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Krt85 | ENSMUSG00000116336 |
| rattus_norvegicus | Krt85 | ENSRNOG00000008436 |
Paralogs (68): KRT33A (ENSG00000006059), VIM (ENSG00000026025), KRT31 (ENSG00000094796), NEFM (ENSG00000104722), KRT23 (ENSG00000108244), KRT37 (ENSG00000108417), KRT32 (ENSG00000108759), KRT18 (ENSG00000111057), LMNB1 (ENSG00000113368), KRT36 (ENSG00000126337), KRT17 (ENSG00000128422), GFAP (ENSG00000131095), KRT34 (ENSG00000131737), KRT33B (ENSG00000131738), NES (ENSG00000132688), PRPH (ENSG00000135406), KRT7 (ENSG00000135480), KRT71 (ENSG00000139648), INA (ENSG00000148798), LMNTD1 (ENSG00000152936), LMNA (ENSG00000160789), KRT84 (ENSG00000161849), KRT82 (ENSG00000161850), KRT80 (ENSG00000167767), KRT1 (ENSG00000167768), KRT24 (ENSG00000167916), KRT8 (ENSG00000170421), KRT78 (ENSG00000170423), KRT86 (ENSG00000170442), KRT75 (ENSG00000170454), KRT6C (ENSG00000170465), KRT4 (ENSG00000170477), KRT74 (ENSG00000170484), KRT72 (ENSG00000170486), KRT83 (ENSG00000170523), BFSP2 (ENSG00000170819), KRT19 (ENSG00000171345), KRT15 (ENSG00000171346), KRT38 (ENSG00000171360), KRT13 (ENSG00000171401)
Protein
Protein identifiers
Keratin, type II cuticular Hb5 — P78386 (reviewed: P78386)
Alternative names: Hair keratin K2.12, Keratin-85, Type II hair keratin Hb5, Type-II keratin Kb25
All UniProt accessions (2): P78386, F5GYI5
UniProt curated annotations — full annotation on UniProt →
Subunit / interactions. Heterotetramer of two type I and two type II keratins.
Tissue specificity. Synthesis occurs immediately above a small population of matrix cells at the base of the hair bulb and the trichocytes lining the dermal papilla and extends upward through the matrix and ends in the lower part of the cortex of the hair shaft.
Disease relevance. Ectodermal dysplasia 4, hair/nail type (ECTD4) [MIM:602032] A form of ectodermal dysplasia, a heterogeneous group of disorders due to abnormal development of two or more ectodermal structures such as hair, teeth, nails and sweat glands, with or without any additional clinical sign. Each combination of clinical features represents a different type of ectodermal dysplasia. ECTD4 is characterized by complete alopecia, hypotricosis and nail dystrophy in all digits. There is no evidence of any other abnormality. Inheritance can be autosomal dominant or recessive. The disease is caused by variants affecting the gene represented in this entry.
Miscellaneous. There are two types of hair/microfibrillar keratin, I (acidic) and II (neutral to basic).
Similarity. Belongs to the intermediate filament family.
RefSeq proteins (2): NP_001287739, NP_002274* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR003054 | Keratin_II | Family |
| IPR018039 | IF_conserved | Conserved_site |
| IPR032444 | Keratin_2_head | Domain |
| IPR039008 | IF_rod_dom | Domain |
Pfam: PF00038, PF16208
UniProt features (13 total): region of interest 7, sequence variant 2, chain 1, domain 1, sequence conflict 1, cross-link 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P78386-F1 | 74.09 | 0.55 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (1): 229
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-6805567 | Keratinization |
| R-HSA-6809371 | Formation of the cornified envelope |
| R-HSA-1266738 | Developmental Biology |
MSigDB gene sets: 139 (showing top):
GOBP_EPITHELIUM_DEVELOPMENT, GOBP_INTERMEDIATE_FILAMENT_BASED_PROCESS, GOBP_INTERMEDIATE_FILAMENT_ORGANIZATION, FOXO4_01, FOXO1_01, GOBP_EPIDERMAL_CELL_DIFFERENTIATION, MARTINEZ_RB1_TARGETS_UP, TCF4_Q5, CATTTCA_MIR203, MODULE_298, GCM_DDX11, GOBP_EPIDERMIS_DEVELOPMENT, AFP1_Q6, POU3F2_02, GOBP_KERATINIZATION
GO Biological Process (3): epidermis development (GO:0008544), keratinization (GO:0031424), intermediate filament organization (GO:0045109)
GO Molecular Function (3): structural molecule activity (GO:0005198), structural constituent of skin epidermis (GO:0030280), protein binding (GO:0005515)
GO Cellular Component (4): obsolete extracellular space (GO:0005615), cytosol (GO:0005829), keratin filament (GO:0045095), intermediate filament (GO:0005882)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Developmental Biology | 1 |
| Keratinization | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| tissue development | 1 |
| keratinocyte differentiation | 1 |
| multicellular organismal process | 1 |
| intermediate filament cytoskeleton organization | 1 |
| supramolecular fiber organization | 1 |
| molecular_function | 1 |
| structural molecule activity | 1 |
| binding | 1 |
| cytoplasm | 1 |
| cellular anatomical structure | 1 |
| intermediate filament | 1 |
| intermediate filament cytoskeleton | 1 |
| polymeric cytoskeletal fiber | 1 |
Protein interactions and networks
STRING
444 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| KRT85 | KRT35 | Q92764 | 732 |
| KRT85 | HOXC13 | P31276 | 492 |
| KRT85 | RFX8 | Q6ZV50 | 462 |
| KRT85 | KRTAP3-1 | Q9BYR8 | 411 |
| KRT85 | KRTAP4-3 | Q9BYR4 | 400 |
| KRT85 | KRTAP9-1 | A8MXZ3 | 384 |
| KRT85 | SMIM15 | Q7Z3B0 | 370 |
| KRT85 | TUSC1 | Q2TAM9 | 368 |
| KRT85 | ZNF354A | O60765 | 360 |
| KRT85 | OR2C3 | Q8N628 | 348 |
| KRT85 | EDAR | Q9UNE0 | 348 |
| KRT85 | FOXN1 | O15353 | 346 |
| KRT85 | KRTAP7-1 | Q8IUC3 | 343 |
| KRT85 | EDARADD | Q8WWZ3 | 339 |
| KRT85 | KRTAP11-1 | Q8IUC1 | 336 |
IntAct
110 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| MLST8 | MTOR | psi-mi:“MI:0914”(association) | 0.850 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| KRT37 | KRT85 | psi-mi:“MI:0915”(physical association) | 0.630 |
| KRT85 | KRT37 | psi-mi:“MI:0915”(physical association) | 0.630 |
| KRT34 | KRT85 | psi-mi:“MI:0915”(physical association) | 0.600 |
| KRT36 | KRT85 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | KRT25 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | KRT27 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CYSRT1 | KRT85 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | KRT31 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT19 | KRT85 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT16 | KRT85 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | KRT39 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | KRT35 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT15 | KRT85 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | KRT40 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT38 | KRT85 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | KRT33B | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | CREB5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| OTX1 | KRT85 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | KLHL38 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | TAB2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | KRT26 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | GNE | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | HAPLN2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CLIC3 | KRT85 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | ZNF655 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT85 | LHX8 | psi-mi:“MI:0915”(physical association) | 0.560 |
BioGRID (72): KRT85 (Affinity Capture-MS), KRT85 (Affinity Capture-MS), KRT85 (Affinity Capture-MS), KRT85 (Affinity Capture-MS), KRT85 (Affinity Capture-MS), KRT85 (Affinity Capture-MS), KRT85 (Affinity Capture-MS), KRT85 (Affinity Capture-MS), KRT85 (Affinity Capture-MS), KRT85 (Affinity Capture-MS), KRT85 (Affinity Capture-MS), KRT85 (Two-hybrid), KRT85 (Two-hybrid), KRT85 (Two-hybrid), KRT85 (Two-hybrid)
ESM2 similar proteins: A4FUZ0, A5A6M5, A5A6P3, A6QNX5, A7YWK3, B0LKP1, B1AQ75, E1AB55, O43790, O76009, O76013, P02534, P15241, P19013, P25690, P25691, P78385, P78386, P97861, Q0P5J7, Q14525, Q14532, Q14533, Q148H4, Q148H5, Q148H7, Q148H8, Q14CN4, Q15323, Q3SY84, Q497I4, Q61765, Q61897, Q62168, Q6IG03, Q6IG04, Q6IME9, Q6IMF0, Q6NXH9, Q86Y46
Diamond homologs: A0A125S9M6, A0JND2, A4FUZ0, A5A6M8, A6NCN2, A7YWK3, O43790, P02542, P02545, P02547, P02548, P04104, P04260, P04261, P04262, P04263, P07196, P07744, P08551, P08928, P09010, P10999, P12035, P12036, P13647, P13648, P15241, P16884, P19013, P19246, P19527, P21619, P21910, P25691, P35908, P48671, P48672, P48678, P48679, P78385
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 61 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Formation of the cornified envelope | 15 | 31.4× | 7e-17 |
| Keratinization | 15 | 19.9× | 4e-14 |
| Macroautophagy | 5 | 13.7× | 2e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| morphogenesis of an epithelium | 15 | 88.9× | 1e-23 |
| intermediate filament organization | 15 | 62.3× | 2e-21 |
| epithelial cell differentiation | 14 | 42.4× | 2e-17 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
169 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 105 |
| Likely benign | 27 |
| Benign | 30 |
Top pathogenic / likely-pathogenic (1)
| Variant ID | HGVS | Classification |
|---|---|---|
| 102444 | NM_002283.4(KRT85):c.1448_1449del (p.Pro483fs) | Pathogenic |
SpliceAI
1070 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 12:52361044:CAC:C | acceptor_gain | 1.0000 |
| 12:52361048:T:A | acceptor_loss | 1.0000 |
| 12:52361465:A:AC | donor_gain | 1.0000 |
| 12:52361466:C:CC | donor_gain | 1.0000 |
| 12:52362245:CCCCA:C | donor_loss | 1.0000 |
| 12:52362246:CCCA:C | donor_loss | 1.0000 |
| 12:52362247:CCACC:C | donor_loss | 1.0000 |
| 12:52362248:CACCT:C | donor_loss | 1.0000 |
| 12:52362249:ACCT:A | donor_loss | 1.0000 |
| 12:52362326:T:TA | donor_gain | 1.0000 |
| 12:52362468:CACG:C | acceptor_gain | 1.0000 |
| 12:52362470:CG:C | acceptor_gain | 1.0000 |
| 12:52362472:C:CC | acceptor_gain | 1.0000 |
| 12:52362975:TCACA:T | acceptor_gain | 1.0000 |
| 12:52362976:CACA:C | acceptor_gain | 1.0000 |
| 12:52362976:CACAC:C | acceptor_gain | 1.0000 |
| 12:52362977:ACA:A | acceptor_gain | 1.0000 |
| 12:52362978:C:CT | acceptor_gain | 1.0000 |
| 12:52362978:CA:C | acceptor_gain | 1.0000 |
| 12:52362979:ACTG:A | acceptor_loss | 1.0000 |
| 12:52362980:C:CC | acceptor_gain | 1.0000 |
| 12:52362980:C:CG | acceptor_loss | 1.0000 |
| 12:52362981:T:C | acceptor_loss | 1.0000 |
| 12:52363244:A:AC | donor_gain | 1.0000 |
| 12:52363244:AC:A | donor_gain | 1.0000 |
| 12:52363245:C:CC | donor_gain | 1.0000 |
| 12:52363245:CC:C | donor_gain | 1.0000 |
| 12:52363245:CCTTG:C | donor_gain | 1.0000 |
| 12:52363408:CTC:C | acceptor_gain | 1.0000 |
| 12:52363409:TC:T | acceptor_gain | 1.0000 |
AlphaMissense
3305 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 12:52364309:C:A | K229N | 0.998 |
| 12:52364309:C:G | K229N | 0.998 |
| 12:52367004:G:C | F134L | 0.997 |
| 12:52367004:G:T | F134L | 0.997 |
| 12:52367005:A:G | F134S | 0.997 |
| 12:52367006:A:G | F134L | 0.997 |
| 12:52363269:C:G | A310P | 0.996 |
| 12:52362272:A:G | L426P | 0.995 |
| 12:52362310:C:A | K413N | 0.995 |
| 12:52362310:C:G | K413N | 0.995 |
| 12:52365160:A:G | L144P | 0.995 |
| 12:52362290:A:C | I420S | 0.994 |
| 12:52362906:A:G | L342P | 0.994 |
| 12:52363364:A:T | V278D | 0.994 |
| 12:52364335:C:G | A221P | 0.994 |
| 12:52366995:G:C | F137L | 0.994 |
| 12:52366995:G:T | F137L | 0.994 |
| 12:52366997:A:G | F137L | 0.994 |
| 12:52367005:A:C | F134C | 0.994 |
| 12:52362302:A:G | L416P | 0.993 |
| 12:52365166:C:G | R142P | 0.993 |
| 12:52366993:A:T | I138N | 0.993 |
| 12:52367013:G:C | N131K | 0.993 |
| 12:52367013:G:T | N131K | 0.993 |
| 12:52367017:A:G | L130P | 0.993 |
| 12:52362282:A:C | Y423D | 0.992 |
| 12:52362282:A:G | Y423H | 0.992 |
| 12:52362288:C:G | A421P | 0.992 |
| 12:52362408:C:G | A381P | 0.992 |
| 12:52362885:A:G | L349P | 0.992 |
dbSNP variants (sampled 300 via entrez): RS1000044252 (12:52360614 A>C), RS1000537337 (12:52364727 C>G), RS1000848800 (12:52368375 C>T), RS1001221613 (12:52360231 T>C), RS1001327463 (12:52365822 G>C), RS1001393434 (12:52365958 A>G), RS1001442977 (12:52365945 A>T), RS1001570920 (12:52360278 C>A), RS1003165133 (12:52364571 T>C), RS1003384251 (12:52363162 C>G,T), RS1003508484 (12:52361358 A>G), RS1003540368 (12:52368499 A>G), RS1003656489 (12:52368659 C>T), RS1003739862 (12:52367143 C>T), RS1004190635 (12:52361113 C>T)
Disease associations
OMIM: gene MIM:602767 | disease phenotypes: MIM:602032
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| ectodermal dysplasia 4, hair/nail type | Definitive | Autosomal recessive |
| pure hair and nail ectodermal dysplasia | Supportive | Autosomal dominant |
Mondo (2): ectodermal dysplasia 4, hair/nail type (MONDO:0011177), pure hair and nail ectodermal dysplasia (MONDO:0019071)
Orphanet (1): Pure hair and nail ectodermal dysplasia (Orphanet:69084)
HPO phenotypes
16 total (16 of 16 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000164 | Abnormality of the dentition |
| HP:0000561 | Absent eyelashes |
| HP:0000971 | Abnormal sweat gland morphology |
| HP:0000972 | Palmoplantar hyperkeratosis |
| HP:0001249 | Intellectual disability |
| HP:0001596 | Alopecia |
| HP:0001806 | Onycholysis |
| HP:0002223 | Absent eyebrow |
| HP:0002231 | Sparse body hair |
| HP:0002299 | Brittle hair |
| HP:0003577 | Congenital onset |
| HP:0003777 | Pili torti |
| HP:0004524 | Temporal hypotrichosis |
| HP:0008394 | Congenital onychodystrophy |
| HP:0008404 | Nail dystrophy |
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000464_1 | Acute lymphoblastic leukemia (childhood) | 8.000000e-08 |
| GCST008158_18 | Body mass index | 3.000000e-06 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004340 | body mass index |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| C566592 | Ectodermal Dysplasia, Pure Hair-Nail Type (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4523263 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
9 total (human), top 9 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | affects binding, increases reaction, decreases expression | 2 |
| jinfukang | affects cotreatment, decreases expression | 1 |
| Resveratrol | affects cotreatment, decreases expression | 1 |
| Arsenic Trioxide | decreases expression | 1 |
| Benzo(a)pyrene | increases methylation | 1 |
| Cisplatin | affects cotreatment, decreases expression | 1 |
| Nicotine | increases expression | 1 |
| Plant Extracts | decreases expression, affects cotreatment | 1 |
| Valproic Acid | increases methylation | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4341413 | Binding | Binding affinity to KRT85 in human A549 cells lysates grown on SILAC media at 10 uM incubated for 1 hr by LC-MS/MS analysis relative to untreated control | Profiling withanolide A for therapeutic targets in neurodegenerative diseases. — Bioorg Med Chem |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Associated diseases: ectodermal dysplasia 4, hair/nail type, pure hair and nail ectodermal dysplasia
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): acute lymphoblastic leukemia, ectodermal dysplasia 4, hair/nail type, pure hair and nail ectodermal dysplasia