LARP4B-DT

Summary

LARP4B-DT (LARP4B divergent transcript, HGNC:55786) is a long non-coding RNA gene on chromosome 10p15.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55786
Approved symbol	LARP4B-DT
Name	LARP4B divergent transcript
Location	10p15.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229869
Ensembl biotype	lncRNA
Entrez	101927762
RNAcentral	URS00000D291F — lncRNA, 407 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000435531, ENST00000777681, ENST00000777682, ENST00000777683, ENST00000777684

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000435531 — 3 exons

Exon	Start	End
ENSE00001641854	942480	942743
ENSE00001730252	942187	942239
ENSE00001776866	933026	933115

Expression profiles

Bgee: expression breadth ubiquitous, 116 present calls, max score 91.90.

Top tissues by expression

116 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	91.90	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.76	gold quality
right testis	UBERON:0004534	86.57	gold quality
left testis	UBERON:0004533	86.38	gold quality
testis	UBERON:0000473	85.64	gold quality
right uterine tube	UBERON:0001302	67.94	gold quality
sural nerve	UBERON:0015488	67.89	silver quality
lymph node	UBERON:0000029	65.35	gold quality
skeletal muscle tissue	UBERON:0001134	64.47	gold quality
hindlimb stylopod muscle	UBERON:0004252	63.81	gold quality
superior frontal gyrus	UBERON:0002661	62.78	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	61.93	gold quality
islet of Langerhans	UBERON:0000006	60.32	gold quality
granulocyte	CL:0000094	60.00	gold quality
monocyte	CL:0000576	59.78	gold quality
bone marrow	UBERON:0002371	59.64	gold quality
stromal cell of endometrium	CL:0002255	58.71	gold quality
duodenum	UBERON:0002114	58.23	gold quality
muscle of leg	UBERON:0001383	58.15	gold quality
right lung	UBERON:0002167	57.89	gold quality
placenta	UBERON:0001987	57.66	gold quality
gastrocnemius	UBERON:0001388	57.60	gold quality
gall bladder	UBERON:0002110	57.60	gold quality
right adrenal gland cortex	UBERON:0035827	57.40	gold quality
subcutaneous adipose tissue	UBERON:0002190	57.35	gold quality
body of stomach	UBERON:0001161	57.26	gold quality
primary visual cortex	UBERON:0002436	57.25	gold quality
cortex of kidney	UBERON:0001225	56.94	gold quality
stomach	UBERON:0000945	56.57	gold quality
prefrontal cortex	UBERON:0000451	56.17	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.