LDB2-AS1

Summary

LDB2-AS1 (LDB2 antisense RNA 1, HGNC:58741) is a long non-coding RNA gene on chromosome 4p15.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58741
Approved symbol	LDB2-AS1
Name	LDB2 antisense RNA 1
Location	4p15.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248138
Ensembl biotype	lncRNA
Entrez	105374505

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000511818, ENST00000512370, ENST00000782749, ENST00000782750, ENST00000782751, ENST00000782752, ENST00000782844, ENST00000782845, ENST00000782846

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000511818 — 4 exons

Exon	Start	End
ENSE00002028211	16421060	16421133
ENSE00002038457	16434057	16434242
ENSE00002042707	16426365	16426440
ENSE00002050624	16402198	16402232

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 99.18.

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
thymus	UBERON:0002370	99.18	gold quality
skeletal muscle tissue	UBERON:0001134	97.16	gold quality
quadriceps femoris	UBERON:0001377	89.68	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	89.11	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.33	gold quality
cerebellar vermis	UBERON:0004720	82.23	silver quality
cortical plate	UBERON:0005343	74.83	gold quality
right uterine tube	UBERON:0001302	65.87	gold quality
sural nerve	UBERON:0015488	65.61	gold quality
myometrium	UBERON:0001296	64.01	gold quality
testis	UBERON:0000473	63.74	gold quality
right lung	UBERON:0002167	63.66	gold quality
left testis	UBERON:0004533	63.51	gold quality
right testis	UBERON:0004534	63.02	gold quality
body of uterus	UBERON:0009853	62.55	gold quality
corpus callosum	UBERON:0002336	62.49	gold quality
adrenal tissue	UBERON:0018303	62.18	gold quality
monocyte	CL:0000576	62.15	gold quality
placenta	UBERON:0001987	61.85	gold quality
subcutaneous adipose tissue	UBERON:0002190	61.00	gold quality
bone marrow	UBERON:0002371	60.59	gold quality
prefrontal cortex	UBERON:0000451	60.52	gold quality
endometrium	UBERON:0001295	60.22	gold quality
adipose tissue	UBERON:0001013	60.13	gold quality
Brodmann (1909) area 9	UBERON:0013540	59.97	gold quality
islet of Langerhans	UBERON:0000006	59.91	gold quality
omental fat pad	UBERON:0010414	59.18	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	59.14	gold quality
left uterine tube	UBERON:0001303	58.88	gold quality
thoracic mammary gland	UBERON:0005200	58.85	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.70

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.