LGALSL-DT

Summary

LGALSL-DT (LGALSL divergent transcript, HGNC:53951) is a long non-coding RNA gene on chromosome 2p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53951
Approved symbol	LGALSL-DT
Name	LGALSL divergent transcript
Location	2p14
Locus type	RNA, long non-coding
Status	Approved
Aliases	LOC105374771
Ensembl gene	ENSG00000223935
Ensembl biotype	lncRNA
Entrez	105374771
RNAcentral	URS0002A1E973 — lncRNA, 2644 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 14 — 14 lncRNA

ENST00000441630, ENST00000647983, ENST00000669208, ENST00000811778, ENST00000811779, ENST00000811780, ENST00000811781, ENST00000811782, ENST00000811783, ENST00000811784, ENST00000811785, ENST00000811786, ENST00000811787, ENST00000811788

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000441630 — 4 exons

Exon	Start	End
ENSE00001670518	64439903	64439974
ENSE00001764775	64453693	64453798
ENSE00001799805	64395220	64395665
ENSE00001803572	64398276	64398374

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 75.34.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	75.34	gold quality
blood	UBERON:0000178	71.59	gold quality
skeletal muscle tissue	UBERON:0001134	70.07	gold quality
hindlimb stylopod muscle	UBERON:0004252	68.92	gold quality
adrenal tissue	UBERON:0018303	68.52	gold quality
bone marrow cell	CL:0002092	64.87	silver quality
muscle of leg	UBERON:0001383	63.67	gold quality
gastrocnemius	UBERON:0001388	63.22	gold quality
tonsil	UBERON:0002372	62.78	gold quality
ganglionic eminence	UBERON:0004023	62.07	gold quality
skin of abdomen	UBERON:0001416	61.84	gold quality
vermiform appendix	UBERON:0001154	61.63	gold quality
zone of skin	UBERON:0000014	61.57	gold quality
colonic epithelium	UBERON:0000397	61.50	silver quality
skin of leg	UBERON:0001511	61.03	gold quality
cortical plate	UBERON:0005343	60.83	gold quality
adrenal gland	UBERON:0002369	60.39	gold quality
left adrenal gland	UBERON:0001234	59.64	gold quality
right adrenal gland	UBERON:0001233	59.58	gold quality
leukocyte	CL:0000738	59.56	gold quality
right adrenal gland cortex	UBERON:0035827	59.50	gold quality
monocyte	CL:0000576	59.18	gold quality
ventricular zone	UBERON:0003053	58.97	silver quality
left adrenal gland cortex	UBERON:0035825	58.96	gold quality
mucosa of transverse colon	UBERON:0004991	58.72	gold quality
rectum	UBERON:0001052	58.54	gold quality
apex of heart	UBERON:0002098	57.86	gold quality
bone marrow	UBERON:0002371	57.51	gold quality
duodenum	UBERON:0002114	57.50	gold quality
cortex of kidney	UBERON:0001225	57.25	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.04

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.