LIFR
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Also known as CD118
Summary
LIFR (LIF receptor subunit alpha, HGNC:6597) is a protein-coding gene on chromosome 5p13.1, encoding Leukemia inhibitory factor receptor (P42702). Signal-transducing molecule.
This gene encodes a protein that belongs to the type I cytokine receptor family. This protein combines with a high-affinity converter subunit, gp130, to form a receptor complex that mediates the action of the leukemia inhibitory factor, a polyfunctional cytokine that is involved in cellular differentiation, proliferation and survival in the adult and the embryo. Mutations in this gene cause Schwartz-Jampel syndrome type 2, a disease belonging to the group of the bent-bone dysplasias. A translocation that involves the promoter of this gene, t(5;8)(p13;q12) with the pleiomorphic adenoma gene 1, is associated with salivary gland pleiomorphic adenoma, a common type of benign epithelial tumor of the salivary gland. Multiple splice variants encoding two different isoforms have been found for this gene.
Source: NCBI Gene 3977 — RefSeq curated summary.
At a glance
- Gene–disease (curated): obsolete Stüve-Wiedemann syndrome (Definitive, ClinGen) — +3 more curated relationships
- GWAS associations: 5
- Clinical variants (ClinVar): 1,419 total — 80 pathogenic, 75 likely-pathogenic
- Phenotypes (HPO): 112
- Druggable target: yes
- Cancer driver (intOGen): activating (oncogene-like) across 2 cancer types
- MANE Select transcript:
NM_001127671
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6597 |
| Approved symbol | LIFR |
| Name | LIF receptor subunit alpha |
| Location | 5p13.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CD118 |
| Ensembl gene | ENSG00000113594 |
| Ensembl biotype | protein_coding |
| OMIM | 151443 |
| Entrez | 3977 |
Gene structure
Transcript identifiers
Ensembl transcripts: 15 — 10 protein_coding, 2 protein_coding_CDS_not_defined, 2 retained_intron, 1 nonsense_mediated_decay
ENST00000263409, ENST00000453190, ENST00000503088, ENST00000506003, ENST00000506990, ENST00000507786, ENST00000508477, ENST00000511561, ENST00000512723, ENST00000872130, ENST00000872131, ENST00000929709, ENST00000952491, ENST00000952492, ENST00000952493
RefSeq mRNA: 4 — MANE Select: NM_001127671
NM_001127671, NM_001364297, NM_001364298, NM_002310
CCDS: CCDS3927
Canonical transcript exons
ENST00000453190 — 20 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001083472 | 38482589 | 38482667 |
| ENSE00001083480 | 38484775 | 38484868 |
| ENSE00001136022 | 38485819 | 38485980 |
| ENSE00001746112 | 38556334 | 38556646 |
| ENSE00002061828 | 38474668 | 38482218 |
| ENSE00003480824 | 38528726 | 38528840 |
| ENSE00003499589 | 38496382 | 38496595 |
| ENSE00003508527 | 38499513 | 38499583 |
| ENSE00003510067 | 38530506 | 38530666 |
| ENSE00003533535 | 38502637 | 38502799 |
| ENSE00003539783 | 38489078 | 38489245 |
| ENSE00003546846 | 38511790 | 38511964 |
| ENSE00003555331 | 38527155 | 38527294 |
| ENSE00003555640 | 38493606 | 38493785 |
| ENSE00003556974 | 38503976 | 38504121 |
| ENSE00003585515 | 38506503 | 38506632 |
| ENSE00003591407 | 38490190 | 38490291 |
| ENSE00003664493 | 38510464 | 38510718 |
| ENSE00003677280 | 38505905 | 38506074 |
| ENSE00003685881 | 38523419 | 38523582 |
Expression profiles
Bgee: expression breadth ubiquitous, 269 present calls, max score 98.61.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 16.6302 / max 478.0573, expressed in 1293 samples.
FANTOM5 promoters (7 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 61353 | 14.1193 | 1280 |
| 61352 | 1.0666 | 349 |
| 61358 | 0.8877 | 145 |
| 61355 | 0.3717 | 111 |
| 61356 | 0.1186 | 61 |
| 61357 | 0.0500 | 22 |
| 61354 | 0.0163 | 6 |
Top tissues by expression
296 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| medial globus pallidus | UBERON:0002477 | 98.61 | gold quality |
| globus pallidus | UBERON:0001875 | 98.59 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 98.49 | gold quality |
| tibia | UBERON:0000979 | 98.07 | gold quality |
| calcaneal tendon | UBERON:0003701 | 97.99 | gold quality |
| subthalamic nucleus | UBERON:0001906 | 97.49 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 97.38 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 97.36 | gold quality |
| pons | UBERON:0000988 | 97.28 | gold quality |
| cardia of stomach | UBERON:0001162 | 97.22 | gold quality |
| skin of hip | UBERON:0001554 | 96.76 | gold quality |
| ventricular zone | UBERON:0003053 | 96.73 | gold quality |
| lower lobe of lung | UBERON:0008949 | 96.73 | gold quality |
| superficial temporal artery | UBERON:0001614 | 96.49 | gold quality |
| inferior vagus X ganglion | UBERON:0005363 | 96.48 | gold quality |
| corpus callosum | UBERON:0002336 | 96.37 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 96.32 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 96.29 | gold quality |
| ventral tegmental area | UBERON:0002691 | 96.01 | gold quality |
| seminal vesicle | UBERON:0000998 | 95.52 | gold quality |
| upper leg skin | UBERON:0004262 | 95.51 | gold quality |
| parietal pleura | UBERON:0002400 | 95.50 | gold quality |
| trigeminal ganglion | UBERON:0001675 | 95.15 | gold quality |
| parotid gland | UBERON:0001831 | 95.00 | gold quality |
| dorsal root ganglion | UBERON:0000044 | 94.93 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 94.67 | gold quality |
| synovial joint | UBERON:0002217 | 94.62 | gold quality |
| urethra | UBERON:0000057 | 94.58 | gold quality |
| mammary duct | UBERON:0001765 | 94.49 | gold quality |
| renal medulla | UBERON:0000362 | 94.48 | gold quality |
Single-cell (SCXA)
Detected in 9 experiment(s), a significant marker in 8.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-9 | yes | 1383.35 |
| E-MTAB-10553 | yes | 740.01 |
| E-MTAB-7249 | yes | 454.49 |
| E-MTAB-10287 | yes | 85.69 |
| E-GEOD-135922 | yes | 44.03 |
| E-CURD-46 | yes | 29.39 |
| E-CURD-112 | yes | 14.88 |
| E-MTAB-10137 | no | 8.08 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): AR, HIF1A, RUNX1
miRNA regulators (miRDB)
283 targeting LIFR, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-9-5P | 100.00 | 72.28 | 2361 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-LET-7A-3P | 100.00 | 74.03 | 3932 |
| HSA-LET-7B-3P | 100.00 | 74.08 | 3913 |
| HSA-LET-7F-1-3P | 100.00 | 74.02 | 3928 |
| HSA-MIR-98-3P | 100.00 | 74.08 | 3907 |
| HSA-MIR-4713-3P | 100.00 | 65.92 | 505 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-511-3P | 99.99 | 68.85 | 1467 |
| HSA-MIR-513B-5P | 99.99 | 69.96 | 2150 |
Literature-anchored findings (GeneRIF, showing 40)
- Review. The structure and function of the LIF-R gene and protein, mRNA processing, and its role in tumor cells are reviewed. (PMID:11042511)
- upper cytokine-binding module and the Ig-like domain of the leukaemia inhibitory factor (LIF) receptor are sufficient for a functional LIF receptor complex (PMID:11812136)
- Separate functions for the two modules of the membrane-proximal cytokine binding domain of glycoprotein 190, the leukemia inhibitory factor low affinity receptor, in ligand binding and receptor activation (gp190) (PMID:11834739)
- interactions of CNTFR with LIFR and gp130 in vitro (PMID:12707266)
- Leukemia inhibitory factor (LIF), cardiotrophin-1, and oncostatin M share structural binding determinants in the immunoglobulin-like domain of LIF receptor (PMID:12707269)
- mutations alter the stability of LIFR messenger RNA transcripts, resulting in the absence of the LIFR protein and in the impairment of the JAK/STAT3 signaling pathway in patient cells (PMID:14740318)
- immunocytochemical staining and mRNA expression of LIF and its receptor are consistent with the concept that LIF might be involved in growth initiation of human primordial follicles through its receptor (PMID:15044601)
- At early human post-implantation stage, LIF is produced from decidua and chorionic villi and may exert its action on trophoblasts. Anembryonic pregnancy cannot be accounted for by defective expression of either LIF or LIF-Rbeta in most circumstances. (PMID:15180980)
- In cells overexpressing a LIFR mutant with the N-terminal cytokine binding domain deleted, signaling by ciliary neurotrophic factor was abolished. (PMID:16051226)
- Down-regulation of PRB in the endometrium is concomitant with the presence of glycodelin in the endometrium, suggesting interaction. (PMID:16759928)
- Expression of leukemia inhibitory factor and its receptor is low in undifferentiated human embryonic stem cells but increases during differentiation. (PMID:16949591)
- sOSMR is able to bind OSM and interleukin-31 when associated to soluble gp130 or soluble interleukin-31R, respectively, and to neutralize both cytokine properties (PMID:17028186)
- The regulation of LIF and its receptor (LIFR) expression in pancreatic carcinoma cells were studied. (PMID:17332938)
- Results present the biophysical and structural characterization of the full-length, transmembrane form of a quaternary cytokine receptor complex consisting of gp130, LIF-R, Ciliary Neurotrophic Factor (CNTF), and its alpha receptor (CNTF-Ralpha). (PMID:18775332)
- Down regulation of Leukemia inhibitory factor receptor is associated with hepatocellular carcinoma. (PMID:19733004)
- The present study indicated that the LIF gene variant may produce susceptibility to hebephrenic schizophrenia and deterioration of working memory function. (PMID:19879916)
- These results demonstrate that cancer-specific methylation and a specific decrease of LIFR expression are a common inactivation event in colon cancer development. (PMID:21617854)
- LIF and LIFR immunolocalized to decidual cells in the mid-late secretory phase endometrium and 1st trimester decidua. (PMID:21966484)
- A significant association was detected between the LIFR gene polymorphisms and schizophrenia patients with persecutory delusion (PMID:21971603)
- findings show that LIFR is a key novel tumor suppressor, whose deregulation may drive the transformation of a significant proportion of human breast cancers (PMID:22535017)
- A unique loop structure in oncostatin M determines binding affinity toward oncostatin M receptor and leukemia inhibitory factor receptor. (PMID:22829597)
- findings identify LIFR as a metastasis suppressor that functions through the Hippo-YAP pathway and has significant prognostic power. (PMID:23001183)
- Because acute ventricle enlargement is observed in susceptible CD118-deficient mice, the phenomenon may occur in a subpopulation of human adults with herpes simplex encephalitis. (PMID:23382563)
- LIFR rs3729740 and possibly ANXA11 rs1049550 may be useful as biomarkers for predicting whether metastatic colorectal cancer patients are sensitive to relevant target regimens, although further validation in large cohorts is needed. (PMID:23579219)
- Data suggest LIF/LIF receptor (alpha subunit) signal transduction facilitates blastocyst implantation or development of tubal pregnancy by stimulating blastocyst adhesion and outgrowth/proliferation of placenta or Fallopian tube epithelial cells. (PMID:24074901)
- LIFR signaling usually follows the JAK/STAT3 pathway, and is initiated by several interleukin-6-type cytokines (PMID:24618404)
- R28E mutation in CNTF abrogatesIL-6 receptor-dependent but retains CNTF receptor-dependent signaling via glycoprotein 130/ LIFR. (PMID:24802752)
- The LIFRalpha-CT3 TAT fusion protein can inhibit miR-155 expression (PMID:25092123)
- Stuve-Wiedemann syndrome patients with (p.Arg692X) LIFR mutation may develop central adrenal insufficiency due to impaired LIF/LIFR signalling. LIF/LIFR system plays a role in human HPA axis regulation. (PMID:25145448)
- Expression of the LIF receptor was strongly increased on immune cells of multiple sclerosis patients. (PMID:25514345)
- LIFR may play a functional role in hepatocarcinogenesis (PMID:25749520)
- Studied the association of tubal pregnancy with leukemia inhibitory factor (LIF) and leukemia inhibitory factor receptor (LIFR) expression in oviduct tissues. (PMID:25790555)
- We report the case of a girl with Stuve-Wiedemann syndrome confirmed on molecular analysis. (PMID:25868946)
- The Leukemia Inhibitory Factor Receptor Gene Is a Direct Target of RUNX1 (PMID:26060100)
- these findings conclude that LIFR functions as a novel metastasis suppressor in Hepatocellular carcinoma and may serve as a prognostic biomarker for Hepatocellular carcinoma patients. (PMID:26249360)
- The C65S mutant LIFR showed altered glycosylation and an elevated expression level that might be attributed to a slow turnover of the mutant form. (PMID:26285796)
- High LIFr expression stimulates melanoma cell migration and is associated with unfavorable prognosis in melanoma. (PMID:26329521)
- LncRNA-LOWEG is a tumor suppressor that inhibits Gastric cancer cell invasion. And LIFR gene is up-regulated by lncRNA-LOWEG. (PMID:26537802)
- Endometrial expression of LIF and LIFR is significantly reduced in the epithelial cells of infertile women. (PMID:27082016)
- LIFR inhibited the expression of beta-catenin. (PMID:27375070)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | osmr | ENSDARG00000100738 |
| mus_musculus | Lifr | ENSMUSG00000054263 |
| rattus_norvegicus | Lifr | ENSRNOG00000011696 |
Paralogs (23): CRLF1 (ENSG00000006016), IL12RB2 (ENSG00000081985), IL5RA (ENSG00000091181), IL12RB1 (ENSG00000096996), IL27RA (ENSG00000104998), EBI3 (ENSG00000105246), GHR (ENSG00000112964), PRLR (ENSG00000113494), LEPR (ENSG00000116678), CSF3R (ENSG00000119535), CNTFR (ENSG00000122756), IL13RA2 (ENSG00000123496), IL13RA1 (ENSG00000131724), IL6ST (ENSG00000134352), IL11RA (ENSG00000137070), OSMR (ENSG00000145623), IL2RG (ENSG00000147168), IL6R (ENSG00000160712), IL23R (ENSG00000162594), IL31RA (ENSG00000164509), IL3RA (ENSG00000185291), CSF2RA (ENSG00000198223), CRLF2 (ENSG00000205755)
Protein
Protein identifiers
Leukemia inhibitory factor receptor — P42702 (reviewed: P42702)
All UniProt accessions (4): D6RF33, D6RJ94, P42702, H0YAF2
UniProt curated annotations — full annotation on UniProt →
Function. Signal-transducing molecule. May have a common pathway with IL6ST. The soluble form inhibits the biological activity of LIF by blocking its binding to receptors on target cells.
Subunit / interactions. Heterodimer composed of LIFR and IL6ST. The heterodimer formed by LIFR and IL6ST interacts with the complex formed by CNTF and CNTFR.
Subcellular location. Cell membrane Secreted.
Disease relevance. Stuve-Wiedemann syndrome 1 (STWS1) [MIM:601559] A form of Stuve-Wiedemann syndrome, an autosomal recessive disease characterized by bowing of tubular bones and other skeletal and craniofacial abnormalities, respiratory distress, feeding difficulties, and hyperthermic episodes. Most patients do not survive past infancy. The disease is caused by variants affecting the gene represented in this entry. A chromosomal aberration involving LIFR is found in salivary gland pleiomorphic adenomas, the most common benign epithelial tumors of the salivary gland. Translocation t(5;8)(p13;q12) with PLAG1.
Domain organisation. The WSXWS motif appears to be necessary for proper protein folding and thereby efficient intracellular transport and cell-surface receptor binding. The box 1 motif is required for JAK interaction and/or activation.
Similarity. Belongs to the type I cytokine receptor family. Type 2 subfamily.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P42702-1 | 1, Membrane | yes |
| P42702-2 | 2, Secreted |
RefSeq proteins (4): NP_001121143, NP_001351226, NP_001351227, NP_002301 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR003529 | Hematopoietin_rcpt_Gp130_CS | Conserved_site |
| IPR003961 | FN3_dom | Domain |
| IPR013783 | Ig-like_fold | Homologous_superfamily |
| IPR036116 | FN3_sf | Homologous_superfamily |
| IPR040817 | LIFR_D2 | Domain |
| IPR040901 | LIFR_N | Domain |
| IPR048497 | LIF-R-like_Ig-like | Domain |
| IPR050379 | Type-I_Cytokine_Rcpt | Family |
Pfam: PF00041, PF17971, PF18207, PF21177, PF25552
UniProt features (98 total): strand 43, glycosylation site 19, sequence variant 7, domain 6, disulfide bond 5, helix 4, region of interest 2, short sequence motif 2, modified residue 2, topological domain 2, turn 2, signal peptide 1, chain 1, compositionally biased region 1, transmembrane region 1
Structure
Experimental structures (PDB)
6 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8D74 | ELECTRON MICROSCOPY | 3.03 |
| 3E0G | X-RAY DIFFRACTION | 3.1 |
| 8D6A | ELECTRON MICROSCOPY | 3.54 |
| 8V2A | ELECTRON MICROSCOPY | 3.59 |
| 8D7R | ELECTRON MICROSCOPY | 3.9 |
| 8V29 | ELECTRON MICROSCOPY | 3.99 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P42702-F1 | 74.10 | 0.38 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (2): 927, 1044
Disulfide bonds (5): 55–65, 82–90, 213–270, 341–351, 466–511
Glycosylation sites (19): 64, 85, 131, 143, 191, 243, 303, 390, 407, 426, 445, 481, 489, 572, 652, 663, 680, 729, 787
Function
Pathways and Gene Ontology
Reactome pathways
10 pathways
| ID | Pathway |
|---|---|
| R-HSA-6788467 | IL-6-type cytokine receptor ligand interactions |
| R-HSA-8939247 | RUNX1 regulates transcription of genes involved in interleukin signaling |
| R-HSA-1280215 | Cytokine Signaling in Immune system |
| R-HSA-168256 | Immune System |
| R-HSA-212436 | Generic Transcription Pathway |
| R-HSA-449147 | Signaling by Interleukins |
| R-HSA-6783589 | Interleukin-6 family signaling |
| R-HSA-73857 | RNA Polymerase II Transcription |
| R-HSA-74160 | Gene expression (Transcription) |
| R-HSA-8878171 | Transcriptional regulation by RUNX1 |
MSigDB gene sets: 553 (showing top):
GSE45365_NK_CELL_VS_CD8_TCELL_UP, BEGUM_TARGETS_OF_PAX3_FOXO1_FUSION_UP, GOBP_SKELETAL_SYSTEM_DEVELOPMENT, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_RESPONSE_TO_PEPTIDE, HOFMANN_CELL_LYMPHOMA_UP, GRAESSMANN_APOPTOSIS_BY_SERUM_DEPRIVATION_UP, GRAESSMANN_RESPONSE_TO_MC_AND_SERUM_DEPRIVATION_UP, GOCC_CELL_SURFACE, RACCACAR_AML_Q6, TGACCTY_ERR1_Q2, BOYLAN_MULTIPLE_MYELOMA_D_DN, ATGTTAA_MIR302C, PICCALUGA_ANGIOIMMUNOBLASTIC_LYMPHOMA_UP, TCF4_Q5
GO Biological Process (7): cell surface receptor signaling pathway (GO:0007166), positive regulation of cell population proliferation (GO:0008284), cytokine-mediated signaling pathway (GO:0019221), response to cytokine (GO:0034097), oncostatin-M-mediated signaling pathway (GO:0038165), leukemia inhibitory factor signaling pathway (GO:0048861), ciliary neurotrophic factor-mediated signaling pathway (GO:0070120)
GO Molecular Function (8): cytokine receptor activity (GO:0004896), leukemia inhibitory factor receptor activity (GO:0004923), ciliary neurotrophic factor receptor binding (GO:0005127), growth factor binding (GO:0019838), cytokine binding (GO:0019955), ciliary neurotrophic factor receptor activity (GO:0004897), oncostatin-M receptor activity (GO:0004924), protein binding (GO:0005515)
GO Cellular Component (6): plasma membrane (GO:0005886), external side of plasma membrane (GO:0009897), signaling receptor complex (GO:0043235), extracellular exosome (GO:0070062), extracellular region (GO:0005576), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-8 pathways:
| Category | Pathways |
|---|---|
| Interleukin-6 family signaling | 1 |
| Transcriptional regulation by RUNX1 | 1 |
| Immune System | 1 |
| RNA Polymerase II Transcription | 1 |
| Cytokine Signaling in Immune system | 1 |
| Signaling by Interleukins | 1 |
| Gene expression (Transcription) | 1 |
| Generic Transcription Pathway | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cytokine-mediated signaling pathway | 3 |
| protein binding | 2 |
| cytokine receptor activity | 2 |
| cellular anatomical structure | 2 |
| signal transduction | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| positive regulation of cellular process | 1 |
| cell surface receptor signaling pathway | 1 |
| cellular response to cytokine stimulus | 1 |
| response to peptide | 1 |
| enzyme-linked receptor protein signaling pathway | 1 |
| transmembrane signaling receptor activity | 1 |
| cytokine binding | 1 |
| immune receptor activity | 1 |
| ciliary neurotrophic factor receptor activity | 1 |
| leukemia inhibitory factor signaling pathway | 1 |
| cytokine receptor binding | 1 |
| ciliary neurotrophic factor binding | 1 |
| ciliary neurotrophic factor-mediated signaling pathway | 1 |
| oncostatin-M-mediated signaling pathway | 1 |
| binding | 1 |
| membrane | 1 |
| cell periphery | 1 |
| plasma membrane | 1 |
| cell surface | 1 |
| side of membrane | 1 |
| protein-containing complex | 1 |
| extracellular vesicle | 1 |
Protein interactions and networks
STRING
2025 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| LIFR | LIF | P15018 | 999 |
| LIFR | OSM | P13725 | 997 |
| LIFR | CNTF | P26441 | 997 |
| LIFR | CNTFR | P26992 | 996 |
| LIFR | CTF1 | Q16619 | 968 |
| LIFR | IL6ST | P40189 | 960 |
| LIFR | STAT3 | P40763 | 940 |
| LIFR | IL6 | P05231 | 879 |
| LIFR | IL11 | P20809 | 834 |
| LIFR | CLCF1 | Q9UBD9 | 831 |
| LIFR | OSMR | Q99650 | 813 |
| LIFR | JAK2 | O60674 | 813 |
| LIFR | JAK1 | P23458 | 795 |
| LIFR | TYK2 | P29597 | 790 |
| LIFR | PTPN11 | Q06124 | 717 |
IntAct
55 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| LIFR | CNTF | psi-mi:“MI:0407”(direct interaction) | 0.810 |
| CNTF | CNTFR | psi-mi:“MI:0915”(physical association) | 0.810 |
| IL6ST | LIF | psi-mi:“MI:0915”(physical association) | 0.740 |
| SCGB1D1 | FAM234B | psi-mi:“MI:0914”(association) | 0.530 |
| DEFA1 | MANBA | psi-mi:“MI:0914”(association) | 0.530 |
| TAFA4 | NRP1 | psi-mi:“MI:0914”(association) | 0.530 |
| FBXO2 | TMEM131L | psi-mi:“MI:0914”(association) | 0.530 |
| LGALS1 | PODXL | psi-mi:“MI:0914”(association) | 0.530 |
| SORT1 | LIFR | psi-mi:“MI:0407”(direct interaction) | 0.510 |
| SORT1 | LIFR | psi-mi:“MI:2364”(proximity) | 0.510 |
| CLCF1 | CNTFR | psi-mi:“MI:0915”(physical association) | 0.490 |
| LIF | LIFR | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| LIFR | OSM | psi-mi:“MI:0407”(direct interaction) | 0.440 |
BioGRID (56): LIFR (Affinity Capture-MS), LIFR (Affinity Capture-MS), LIFR (Affinity Capture-MS), LIFR (Affinity Capture-MS), LIFR (Affinity Capture-MS), LIFR (Affinity Capture-MS), LIFR (Affinity Capture-MS), LIFR (Affinity Capture-MS), LIFR (Affinity Capture-RNA), LIFR (Affinity Capture-RNA), CNTFR (Reconstituted Complex), LIFR (Affinity Capture-Western), LIF (Reconstituted Complex), LIFR (Affinity Capture-MS), LIFR (Affinity Capture-MS)
ESM2 similar proteins: A2AED3, B0CLX4, B2RU80, B3DK56, B3EX02, E2RK30, F1NWE3, O14522, O70458, O70535, O88488, P08922, P08941, P08F94, P0C5E4, P17948, P20352, P23467, P28827, P28828, P35822, P35969, P35992, P42702, P42703, P53767, P97378, Q15262, Q2EY13, Q2EY15, Q2VWP7, Q2VWP9, Q589G5, Q5RFR6, Q5VJ70, Q5VTL7, Q5XNR9, Q62959, Q63132, Q65Z14
Diamond homologs: O70458, P42702, P42703, Q5XNR9, Q65Z14, Q99650, O70535, P97603, P97798, Q92859, A4IGL7, D3YXG0, D3YYU8, F1M0Z1, G5EF96, O15146, O42422, O73878, O75962, P0C6S8, P22607, P43146, P55144, P70211, Q01973, Q0KL02, Q1LUA6, Q3UQ28, Q5DTJ9, Q5RDJ4, Q5VST9, Q61006, Q62838, Q63155, Q63495, Q6GQU6, Q6MZW2, Q6NUX0, Q6PJG9, Q78DX7
SIGNOR signaling
13 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| CTF1 | up-regulates | LIFR | binding |
| LIF | up-regulates | LIFR | binding |
| OSM | up-regulates | LIFR | binding |
| LIFR | up-regulates | IL6ST | binding |
| Gbeta | down-regulates | LIFR | phosphorylation |
| ERK1/2 | down-regulates | LIFR | phosphorylation |
| FAM3C | “up-regulates activity” | LIFR | binding |
| mifepristone | “down-regulates activity” | LIFR | “chemical modification” |
| MAPK1 | down-regulates | LIFR | phosphorylation |
| MAPK3 | down-regulates | LIFR | phosphorylation |
| CNTF | up-regulates | LIFR | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 56 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| IL-6-type cytokine receptor ligand interactions | 6 | 105.7× | 2e-09 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| negative regulation of neuron apoptotic process | 5 | 11.3× | 7e-03 |
Disease & clinical
Cancer significance
From intOGen — cancer-driver classification: activating (oncogene-like) across 2 cancer types — MEL, SCLC.
Clinical variants and AI predictions
ClinVar
1419 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 80 |
| Likely pathogenic | 75 |
| Uncertain significance | 507 |
| Likely benign | 579 |
| Benign | 84 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1071656 | NM_001127671.2(LIFR):c.2326_2327dup (p.Leu776fs) | Pathogenic |
| 1072156 | NM_001127671.2(LIFR):c.2053_2054del (p.Val685fs) | Pathogenic |
| 1072323 | NM_001127671.2(LIFR):c.1418del (p.Ser473fs) | Pathogenic |
| 1072672 | NM_001127671.2(LIFR):c.1626dup (p.Arg543fs) | Pathogenic |
| 1074532 | NM_001127671.2(LIFR):c.1290del (p.Val431fs) | Pathogenic |
| 1075195 | NM_001127671.2(LIFR):c.2036C>G (p.Ser679Ter) | Pathogenic |
| 1358242 | NM_001127671.2(LIFR):c.1471del (p.Ser491fs) | Pathogenic |
| 1372780 | NM_001127671.2(LIFR):c.325G>T (p.Glu109Ter) | Pathogenic |
| 1381166 | NM_001127671.2(LIFR):c.23T>A (p.Leu8Ter) | Pathogenic |
| 1392758 | NM_001127671.2(LIFR):c.1622del (p.Thr541fs) | Pathogenic |
| 1408819 | NM_001127671.2(LIFR):c.2099dup (p.Leu701fs) | Pathogenic |
| 14460 | NM_001127671.2(LIFR):c.1789C>T (p.Arg597Ter) | Pathogenic |
| 14461 | NM_001127671.2(LIFR):c.2013dup (p.Met672fs) | Pathogenic |
| 1451647 | NM_001127671.2(LIFR):c.1687G>T (p.Glu563Ter) | Pathogenic |
| 1454788 | NM_001127671.2(LIFR):c.173_176del (p.Asn58fs) | Pathogenic |
| 1455438 | NM_001127671.2(LIFR):c.1983G>A (p.Trp661Ter) | Pathogenic |
| 1456932 | NM_001127671.2(LIFR):c.1781_1782dup (p.Glu595fs) | Pathogenic |
| 1459382 | NM_001127671.2(LIFR):c.1475_1482del (p.Tyr492fs) | Pathogenic |
| 1935371 | NM_001127671.2(LIFR):c.1646del (p.Gly549fs) | Pathogenic |
| 1948071 | NM_001127671.2(LIFR):c.883dup (p.Glu295fs) | Pathogenic |
| 1952160 | NM_001127671.2(LIFR):c.1302del (p.His434fs) | Pathogenic |
| 2031867 | NM_001127671.2(LIFR):c.2119dup (p.Gln707fs) | Pathogenic |
| 2034342 | NM_001127671.2(LIFR):c.1994dup (p.Arg666fs) | Pathogenic |
| 2034928 | NM_001127671.2(LIFR):c.1947C>G (p.Tyr649Ter) | Pathogenic |
| 2064642 | NM_001127671.2(LIFR):c.1903C>T (p.Gln635Ter) | Pathogenic |
| 2092511 | NM_001127671.2(LIFR):c.1507dup (p.Thr503fs) | Pathogenic |
| 2099347 | NM_001127671.2(LIFR):c.704G>A (p.Trp235Ter) | Pathogenic |
| 2106354 | NM_001127671.2(LIFR):c.1510_1513del (p.Leu504fs) | Pathogenic |
| 2107273 | NM_001127671.2(LIFR):c.2010C>A (p.Cys670Ter) | Pathogenic |
| 2107623 | NM_001127671.2(LIFR):c.542del (p.Ser181fs) | Pathogenic |
SpliceAI
3763 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 5:38482583:GATTA:G | donor_loss | 1.0000 |
| 5:38482586:TA:T | donor_loss | 1.0000 |
| 5:38482588:C:CA | donor_loss | 1.0000 |
| 5:38482665:ATCC:A | acceptor_loss | 1.0000 |
| 5:38482667:CCT:C | acceptor_loss | 1.0000 |
| 5:38482667:CCTT:C | acceptor_gain | 1.0000 |
| 5:38482668:C:CC | acceptor_gain | 1.0000 |
| 5:38482670:T:C | acceptor_gain | 1.0000 |
| 5:38484774:CCATT:C | donor_gain | 1.0000 |
| 5:38496552:T:TC | acceptor_gain | 1.0000 |
| 5:38496591:AAAGG:A | acceptor_gain | 1.0000 |
| 5:38496592:AAGG:A | acceptor_gain | 1.0000 |
| 5:38496596:C:CC | acceptor_gain | 1.0000 |
| 5:38496598:A:C | acceptor_gain | 1.0000 |
| 5:38499582:ACC:A | acceptor_loss | 1.0000 |
| 5:38502635:A:AC | donor_gain | 1.0000 |
| 5:38502636:C:CC | donor_gain | 1.0000 |
| 5:38502636:CTGG:C | donor_gain | 1.0000 |
| 5:38502795:TTCCG:T | acceptor_gain | 1.0000 |
| 5:38502797:CCG:C | acceptor_gain | 1.0000 |
| 5:38502798:CG:C | acceptor_gain | 1.0000 |
| 5:38502798:CGC:C | acceptor_gain | 1.0000 |
| 5:38502800:C:CC | acceptor_gain | 1.0000 |
| 5:38502803:T:C | acceptor_gain | 1.0000 |
| 5:38502803:T:TC | acceptor_gain | 1.0000 |
| 5:38510456:ATACT:A | donor_loss | 1.0000 |
| 5:38510457:TACTT:T | donor_loss | 1.0000 |
| 5:38510458:ACTTA:A | donor_loss | 1.0000 |
| 5:38510459:CTTAC:C | donor_loss | 1.0000 |
| 5:38510460:TTACA:T | donor_loss | 1.0000 |
AlphaMissense
7239 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 5:38489181:C:A | W744C | 0.999 |
| 5:38489181:C:G | W744C | 0.999 |
| 5:38489183:A:G | W744R | 0.999 |
| 5:38489183:A:T | W744R | 0.999 |
| 5:38484801:A:C | S855R | 0.998 |
| 5:38484801:A:T | S855R | 0.998 |
| 5:38484803:T:G | S855R | 0.998 |
| 5:38484838:G:C | P843R | 0.997 |
| 5:38485890:A:G | L809P | 0.997 |
| 5:38484815:C:G | G851R | 0.996 |
| 5:38484815:C:T | G851R | 0.996 |
| 5:38485897:A:C | Y807D | 0.996 |
| 5:38489182:C:G | W744S | 0.996 |
| 5:38489194:A:T | I740K | 0.996 |
| 5:38489198:A:G | S739P | 0.996 |
| 5:38481712:A:C | S1059R | 0.995 |
| 5:38481712:A:T | S1059R | 0.995 |
| 5:38481714:T:G | S1059R | 0.995 |
| 5:38489153:C:G | G754R | 0.995 |
| 5:38493649:C:A | W674C | 0.995 |
| 5:38493649:C:G | W674C | 0.995 |
| 5:38499560:A:G | W542R | 0.995 |
| 5:38499560:A:T | W542R | 0.995 |
| 5:38506567:A:G | W353R | 0.995 |
| 5:38506567:A:T | W353R | 0.995 |
| 5:38510471:A:C | F328L | 0.995 |
| 5:38510471:A:T | F328L | 0.995 |
| 5:38510473:A:G | F328L | 0.995 |
| 5:38484794:A:G | C858R | 0.994 |
| 5:38485914:A:G | L801P | 0.994 |
dbSNP variants (sampled 300 via entrez): RS1000000389 (5:38584606 G>A), RS1000000760 (5:38518609 T>C), RS1000008118 (5:38478450 T>C), RS1000094306 (5:38557298 A>AT), RS1000103470 (5:38502017 A>C), RS1000149995 (5:38542844 G>T), RS1000151081 (5:38502355 T>C), RS1000169167 (5:38542125 T>C), RS1000188535 (5:38609544 T>C), RS1000194485 (5:38582003 T>G), RS1000205034 (5:38559117 G>A), RS1000221204 (5:38576938 C>T), RS1000222193 (5:38541408 A>G), RS1000257248 (5:38558771 C>T), RS1000302123 (5:38518666 T>C)
Disease associations
OMIM: gene MIM:151443 | disease phenotypes: MIM:601559, MIM:610805
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| Stüve-Wiedemann syndrome | Definitive | Autosomal recessive |
| Stüve-Wiedemann syndrome 1 | Definitive | Autosomal recessive |
| congenital anomaly of kidney and urinary tract | Strong | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| obsolete Stüve-Wiedemann syndrome | Definitive | AR |
Mondo (6): Stuve-Wiedemann syndrome (MONDO:0031280), Stüve-Wiedemann syndrome 1 (MONDO:0800043), congenital anomaly of kidney and urinary tract (MONDO:0019719), connective tissue disorder (MONDO:0003900), hereditary breast ovarian cancer syndrome (MONDO:0003582), (MONDO:0011108)
Orphanet (3): Stüve-Wiedemann syndrome (Orphanet:3206), Renal or urinary tract malformation (Orphanet:93545), Hereditary breast and/or ovarian cancer syndrome (Orphanet:145)
HPO phenotypes
112 total (30 of 112 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000164 | Abnormality of the dentition |
| HP:0000205 | Pursed lips |
| HP:0000211 | Trismus |
| HP:0000233 | Thin vermilion border |
| HP:0000272 | Malar flattening |
| HP:0000293 | Full cheeks |
| HP:0000321 | Square face |
| HP:0000347 | Micrognathia |
| HP:0000369 | Low-set ears |
| HP:0000463 | Anteverted nares |
| HP:0000470 | Short neck |
| HP:0000478 | Abnormality of the eye |
| HP:0000490 | Deeply set eye |
| HP:0000504 | Abnormality of vision |
| HP:0000632 | Lacrimation abnormality |
| HP:0000633 | Decreased lacrimation |
| HP:0000670 | Carious teeth |
| HP:0000821 | Hypothyroidism |
| HP:0000883 | Thin ribs |
| HP:0000935 | Thickened cortex of long bones |
| HP:0000938 | Osteopenia |
| HP:0000939 | Osteoporosis |
| HP:0000944 | Abnormal metaphysis morphology |
| HP:0000954 | Single transverse palmar crease |
| HP:0000960 | Sacral dimple |
| HP:0000963 | Thin skin |
| HP:0000966 | Hypohidrosis |
| HP:0000975 | Hyperhidrosis |
| HP:0001056 | Milia |
GWAS associations
5 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST003043_72 | Inflammatory bowel disease | 2.000000e-20 |
| GCST003044_153 | Crohn’s disease | 2.000000e-16 |
| GCST003045_99 | Ulcerative colitis | 9.000000e-12 |
| GCST005024_39 | Pursuit maintenance gain | 4.000000e-07 |
| GCST006585_2694 | Blood protein levels | 2.000000e-06 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0008433 | pursuit maintenance gain measurement |
MeSH disease descriptors (4)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D003240 | Connective Tissue Diseases | C17.300 |
| D061325 | Hereditary Breast and Ovarian Cancer Syndrome | C04.588.180.483; C04.588.322.455.431; C04.700.517; C12.050.351.500.056.630.705.431; C12.050.351.937.418.685.431; C12.100.250.056.630.705.431; C12.900.418.685.431; C16.320.700.517; C17.800.090.500.483; C19.344.410.431; C19.391.630.705.431 |
| C566906 | Cakut (supp.) | |
| C537502 | Stuve-Wiedemann syndrome (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL3124735 (SINGLE PROTEIN), CHEMBL3137274 (PROTEIN-PROTEIN INTERACTION)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: catalytic receptor — IL-6 receptor family
ChEMBL bioactivities
29 potent at pChembl≥5 of 40 total, top 26 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 5.70 | IC50 | 2000 | nM | CHEMBL6096604 |
| 5.62 | IC50 | 2400 | nM | CHEMBL6083105 |
| 5.60 | IC50 | 2500 | nM | CHEMBL6160517 |
| 5.46 | IC50 | 3510 | nM | CHEMBL6101820 |
| 5.38 | IC50 | 4150 | nM | CHEMBL6083109 |
| 5.36 | IC50 | 4360 | nM | CHEMBL6103438 |
| 5.35 | IC50 | 4440 | nM | CHEMBL6133073 |
| 5.33 | IC50 | 4710 | nM | CHEMBL6091991 |
| 5.31 | IC50 | 4940 | nM | CHEMBL6074549 |
| 5.30 | IC50 | 4970 | nM | CHEMBL4445722 |
| 5.30 | IC50 | 5050 | nM | CHEMBL6083108 |
| 5.28 | IC50 | 5270 | nM | CHEMBL318457 |
| 5.21 | IC50 | 6110 | nM | CHEMBL4588863 |
| 5.18 | IC50 | 6650 | nM | CHEMBL6096604 |
| 5.18 | IC50 | 6630 | nM | CHEMBL6078316 |
| 5.17 | IC50 | 6830 | nM | CHEMBL6103234 |
| 5.17 | IC50 | 6700 | nM | CHEMBL6078316 |
| 5.16 | IC50 | 6910 | nM | CHEMBL6102492 |
| 5.15 | IC50 | 7040 | nM | CHEMBL6091767 |
| 5.12 | IC50 | 7630 | nM | CHEMBL6101988 |
| 5.12 | IC50 | 7630 | nM | CHEMBL6120230 |
| 5.09 | IC50 | 8200 | nM | CHEMBL4445722 |
| 5.05 | IC50 | 8850 | nM | CHEMBL6134519 |
| 5.04 | IC50 | 9230 | nM | CHEMBL6120333 |
| 5.03 | IC50 | 9300 | nM | CHEMBL6160517 |
| 5.01 | IC50 | 9680 | nM | CHEMBL6114912 |
CTD chemical–gene interactions
69 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, increases expression, affects expression, decreases expression | 6 |
| methylmercuric chloride | increases expression, affects cotreatment | 4 |
| trichostatin A | affects cotreatment, increases expression, decreases expression | 3 |
| Air Pollutants | affects cotreatment, decreases expression, increases abundance | 3 |
| Benzo(a)pyrene | affects methylation, decreases expression, decreases methylation | 3 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | decreases expression | 3 |
| sodium arsenite | affects cotreatment, decreases expression, increases abundance, increases expression | 2 |
| mercuric bromide | increases expression, affects cotreatment | 2 |
| entinostat | increases expression, affects cotreatment | 2 |
| (+)-JQ1 compound | increases expression | 2 |
| Panobinostat | affects cotreatment, increases expression | 2 |
| Arsenic | affects expression, affects cotreatment, decreases expression, increases abundance | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Tetrachlorodibenzodioxin | decreases expression, increases expression | 2 |
| Tobacco Smoke Pollution | decreases expression | 2 |
| Tretinoin | increases expression | 2 |
| Cyclosporine | decreases expression | 2 |
| Aflatoxin B1 | decreases expression, increases methylation | 2 |
| p-Chloromercuribenzoic Acid | increases expression, affects cotreatment | 2 |
| aristolochic acid I | decreases expression | 1 |
| dicrotophos | decreases expression | 1 |
| oxybenzone | increases expression | 1 |
| alpha-pinene | increases abundance, affects cotreatment, decreases expression | 1 |
| bisphenol A | affects cotreatment, increases expression | 1 |
| perfluorooctanoic acid | increases expression | 1 |
| manganese chloride | increases abundance, affects cotreatment, decreases expression | 1 |
| nickel sulfate | increases expression | 1 |
| methacrylaldehyde | affects cotreatment, decreases expression, increases abundance | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
ChEMBL screening assays
6 unique, capped per target: 6 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL6073360 | Binding | Antagonist activity at LIFR (unknown origin) using LIF as substrate relative to control | Design, Synthesis, and Pharmacological Evaluation of Dual FXR-LIFR Modulators for the Treatment of Liver Fibrosis. — J Med Chem |
Cellosaurus cell lines
29 cell lines: 28 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_0393 | LN-229 | Cancer cell line | Female |
| CVCL_A8V5 | LN229/CD20 | Cancer cell line | Female |
| CVCL_D2R8 | LN229/mCCR3 | Cancer cell line | Female |
| CVCL_D2RM | LN229/mCD39 | Cancer cell line | Female |
| CVCL_D2RW | LN229/CD133 | Cancer cell line | Female |
| CVCL_D2S5 | LN229/hPD-L1 | Cancer cell line | Female |
| CVCL_D2SJ | LN229/mEGFR | Cancer cell line | Female |
| CVCL_D2SN | LN229/EGFR | Cancer cell line | Female |
| CVCL_D2SR | LN229/mHER2 | Cancer cell line | Female |
| CVCL_D2T3 | LN229/HER2 | Cancer cell line | Female |
Clinical trials (associated diseases)
138 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT01042158 | PHASE4 | COMPLETED | A Clinical Trial of Ambrisentan and Tadalafil in Pulmonary Arterial Hypertension Associated With Systemic Sclerosis |
| NCT03688191 | PHASE4 | UNKNOWN | Study of Sirolimus in CTD-TP in China |
| NCT04169100 | PHASE4 | UNKNOWN | Novel Form of Acquired Long QT Syndrome |
| NCT04197050 | PHASE4 | UNKNOWN | Effect of Sacubitril/Valsartan on Reduced Right Ventricular Ejection Fraction in Patients With CTD |
| NCT04928586 | PHASE4 | UNKNOWN | Immunosuppressant Combined With Pirfenidone in CTD-ILD |
| NCT05440240 | PHASE4 | RECRUITING | Percutaneous Needle Fasciotomy +/- Corticosteroid Injection for Dupuytren’s Contracture |
| NCT05505409 | PHASE4 | UNKNOWN | Efficacy and Safety of Pirfenidone in CTD-ILD |
| NCT06499233 | PHASE4 | RECRUITING | Efficacy and Safety of Prophylactic Treatment for Pneumocystis Jirovecii Pneumonia in Patients With Autoimmune Inflammatory Rheumatic Disease |
| NCT02562170 | PHASE4 | COMPLETED | Protexa® Versus TiLoopBra® in Immediate Breast Reconstruction- A Pilot Study |
| NCT00864201 | PHASE3 | UNKNOWN | A Study to Evaluate the Use of Bosentan in Patients With Exercise Induced Pulmonary Arterial Hypertension Associated With Connective Tissue Disease |
| NCT01196091 | PHASE3 | COMPLETED | A Study of LY2127399 in Participants With Systemic Lupus Erythematosus |
| NCT01205438 | PHASE3 | COMPLETED | A Study of LY2127399 in Participants With Systemic Lupus Erythematosus |
| NCT01488708 | PHASE3 | TERMINATED | On Open-Label Study in Participants With Systemic Lupus Erythematosus |
| NCT03626688 | PHASE3 | COMPLETED | A Study Evaluating the Efficacy and Safety of Ralinepag to Improve Treatment Outcomes in PAH Patients |
| NCT03683186 | PHASE3 | ENROLLING_BY_INVITATION | A Study Evaluating the Long-Term Efficacy and Safety of Ralinepag in Subjects With PAH Via an Open-Label Extension |
| NCT04084678 | PHASE3 | TERMINATED | A Study of Ralinepag to Evaluate Effects on Exercise Capacity by CPET in Subjects With WHO Group 1 PH |
| NCT06716606 | PHASE3 | RECRUITING | A Study to Investigate the Long-term Safety and Efficacy of Belimumab in Adults With Interstitial Lung Disease (ILD) Associated With Systemic Sclerosis (SSc) and Other Connective Tissue Diseases (CTD) (BLISSconneCTD-OLE) |
| NCT06917690 | PHASE3 | RECRUITING | A Study to Learn About the Safety and Efficacy of the Drug Oleogel-S10 in Japanese Patients With Epidermolysis Bullosa |
| NCT00673335 | PHASE3 | COMPLETED | Letrozole in Preventing Breast Cancer in Postmenopausal Women With a BRCA1 or BRCA2 Mutation |
| NCT00685256 | PHASE3 | COMPLETED | Standard Genetic Counseling With or Without a Decision Guide in Improving Communication Between Mothers Undergoing BRCA1/2 Testing and Their Minor-Age Children |
| NCT03162276 | PHASE3 | UNKNOWN | Trial of Inquiry Based Stress Reduction (IBSR) Program for BRCA1/2 Mutation Carriers |
| NCT00004357 | PHASE2 | COMPLETED | Absorption of Corticosteroids in Children With Juvenile Dermatomyositis |
| NCT00005675 | PHASE2 | COMPLETED | Oral Type I Collagen for Relieving Scleroderma |
| NCT01808196 | PHASE2 | COMPLETED | Testing Effectiveness of Losartan in Patients With EoE With or Without a CTD |
| NCT02682511 | PHASE2 | ACTIVE_NOT_RECRUITING | Oral Ifetroban to Treat Diffuse Cutaneous Systemic Sclerosis (SSc) or SSc-associated Pulmonary Arterial Hypertension |
| NCT04993885 | PHASE2 | RECRUITING | Avatrombopag in the Treatment of Adult Immune Thrombocytopenia With Autoantibodies |
| NCT05516758 | PHASE2 | TERMINATED | A Study of Peresolimab (LY3462817) in Participants With Moderately-to-Severely Active Rheumatoid Arthritis |
| NCT05998759 | PHASE2 | RECRUITING | Telitacicept for the Treatment of Connective Tissue Disease-associated Thrombocytopenia |
| NCT06104228 | PHASE2 | RECRUITING | 129 Xenon MRI as a Biomarker for Diagnosis and Response to Therapy in Pulmonary Arterial Hypertension (PAH) |
| NCT00253539 | PHASE2 | COMPLETED | Arzoxifene or Tamoxifen in Preventing Breast Cancer in Premenopausal Women at High Risk for Breast Cancer |
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Related Atlas pages
- Associated diseases: Stüve-Wiedemann syndrome 1, congenital anomaly of kidney and urinary tract
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): congenital anomaly of kidney and urinary tract, connective tissue disorder, Stuve-Wiedemann syndrome, Stüve-Wiedemann syndrome 1