LINC00102

Summary

LINC00102 (long intergenic non-protein coding RNA 102, HGNC:30470) is a long non-coding RNA gene on chromosome Xp22.33 and Yp11.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:30470
Approved symbol	LINC00102
Name	long intergenic non-protein coding RNA 102
Location	Xp22.33 and Yp11.31
Locus type	RNA, long non-coding
Status	Approved
Aliases	OTTHUMT00000055623
Ensembl gene	ENSG00000230542
Ensembl biotype	lncRNA
Entrez	100359394
RNAcentral	URS000075E171 — lncRNA, 1352 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000445785

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000445785 — 2 exons

Exon	Start	End
ENSE00001595058	2612988	2613696
ENSE00001676508	2614717	2615347

Expression profiles

Bgee: expression breadth broad, 98 present calls, max score 95.79.

Top tissues by expression

188 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	95.79	gold quality
colonic epithelium	UBERON:0000397	67.96	gold quality
bone marrow cell	CL:0002092	65.00	silver quality
sural nerve	UBERON:0015488	63.50	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.03	gold quality
ganglionic eminence	UBERON:0004023	58.11	gold quality
monocyte	CL:0000576	56.75	gold quality
leukocyte	CL:0000738	56.69	gold quality
vena cava	UBERON:0004087	54.40	gold quality
stromal cell of endometrium	CL:0002255	51.04	silver quality
tonsil	UBERON:0002372	50.53	silver quality
tendon of biceps brachii	UBERON:0008188	49.43	gold quality
calcaneal tendon	UBERON:0003701	48.94	silver quality
medial globus pallidus	UBERON:0002477	48.90	gold quality
cortex of kidney	UBERON:0001225	48.73	gold quality
blood	UBERON:0000178	48.10	silver quality
bone marrow	UBERON:0002371	47.29	gold quality
lymph node	UBERON:0000029	47.22	silver quality
muscle of leg	UBERON:0001383	47.22	silver quality
right lung	UBERON:0002167	47.15	gold quality
globus pallidus	UBERON:0001875	46.92	gold quality
skin of abdomen	UBERON:0001416	46.60	gold quality
lower esophagus mucosa	UBERON:0035834	46.30	silver quality
lung	UBERON:0002048	46.22	silver quality
uterine cervix	UBERON:0000002	46.20	silver quality
gastrocnemius	UBERON:0001388	46.16	silver quality
subcutaneous adipose tissue	UBERON:0002190	46.13	gold quality
vermiform appendix	UBERON:0001154	46.08	silver quality
islet of Langerhans	UBERON:0000006	45.91	silver quality
upper lobe of lung	UBERON:0008948	45.86	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.17

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.