LINC00113

Summary

LINC00113 (long intergenic non-protein coding RNA 113, HGNC:1264) is a long non-coding RNA gene on chromosome 21q21.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:1264
Approved symbol	LINC00113
Name	long intergenic non-protein coding RNA 113
Location	21q21.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	SLERCC
Ensembl gene	ENSG00000225298
Ensembl biotype	lncRNA
Entrez	54088
RNAcentral	URS00005F2214 — lncRNA, 524 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000411460, ENST00000425376, ENST00000442550, ENST00000719710, ENST00000719711, ENST00000719712, ENST00000719713

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000411460 — 4 exons

Exon	Start	End
ENSE00001703324	27745818	27746032
ENSE00001715187	27743393	27743504
ENSE00004037731	27751072	27751233
ENSE00004037732	27722327	27722413

Expression profiles

Bgee: expression breadth ubiquitous, 113 present calls, max score 80.38.

Top tissues by expression

211 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.38	gold quality
buccal mucosa cell	CL:0002336	79.59	silver quality
left testis	UBERON:0004533	75.90	gold quality
right testis	UBERON:0004534	74.11	gold quality
testis	UBERON:0000473	72.31	gold quality
calcaneal tendon	UBERON:0003701	68.47	gold quality
sural nerve	UBERON:0015488	66.50	silver quality
tibialis anterior	UBERON:0001385	64.69	silver quality
ileal mucosa	UBERON:0000331	63.77	gold quality
adult mammalian kidney	UBERON:0000082	62.21	gold quality
metanephros cortex	UBERON:0010533	59.11	gold quality
kidney	UBERON:0002113	58.14	gold quality
cortex of kidney	UBERON:0001225	58.12	gold quality
right uterine tube	UBERON:0001302	57.94	gold quality
tendon	UBERON:0000043	57.79	gold quality
pancreatic ductal cell	CL:0002079	57.76	silver quality
muscle of leg	UBERON:0001383	56.90	gold quality
islet of Langerhans	UBERON:0000006	56.46	gold quality
leukocyte	CL:0000738	54.56	gold quality
epithelial cell of pancreas	CL:0000083	54.38	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
metanephros	UBERON:0000081	53.91	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
adrenal tissue	UBERON:0018303	53.11	gold quality
corpus callosum	UBERON:0002336	52.99	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.56	gold quality
monocyte	CL:0000576	51.74	silver quality
hindlimb stylopod muscle	UBERON:0004252	51.59	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.07

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.