LINC00208
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Summary
LINC00208 (long intergenic non-protein coding RNA 208, HGNC:15535) is a long non-coding RNA gene on chromosome 8p23.1.
At a glance
- Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:15535 |
| Approved symbol | LINC00208 |
| Name | long intergenic non-protein coding RNA 208 |
| Location | 8p23.1 |
| Locus type | RNA, long non-coding |
| Status | Approved |
| Ensembl gene | ENSG00000170983 |
| Ensembl biotype | lncRNA |
| Entrez | 83655 |
| RNAcentral | URS000075E981 — lncRNA, 1927 nt, 1 organism(s) |
Gene structure
Transcript identifiers
Ensembl transcripts: 5 — 5 lncRNA
ENST00000304233, ENST00000652958, ENST00000653131, ENST00000655780, ENST00000661938
RefSeq mRNA: 0 — MANE Select: None
Canonical transcript exons
ENST00000304233 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001175444 | 11578370 | 11578641 |
| ENSE00001175455 | 11576313 | 11577317 |
| ENSE00001286086 | 11580470 | 11581342 |
Expression profiles
Bgee: expression breadth tissue_specific, 9 present calls, max score 49.99.
Top tissues by expression
9 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| monocyte | CL:0000576 | 49.99 | silver quality |
| gastrocnemius | UBERON:0001388 | 46.20 | gold quality |
| left testis | UBERON:0004533 | 43.77 | gold quality |
| testis | UBERON:0000473 | 43.53 | gold quality |
| heart left ventricle | UBERON:0002084 | 43.32 | silver quality |
| right testis | UBERON:0004534 | 42.53 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 35.91 | silver quality |
| skin of leg | UBERON:0001511 | 33.94 | silver quality |
| tibial nerve | UBERON:0001323 | 28.13 | silver quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 0.18 |
Regulation
Is transcription factor: no
Cross-species orthologs
0 orthologs
Protein
Non-coding RNA — no protein product; not a drug target.
Function
No curated pathway, Gene-Ontology, or interaction data.
Disease & clinical
No curated disease, variant, or cancer-driver associations.
Drugs & pharmacology
No drug or pharmacology data — not an established drug target.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): atrial fibrillation, Barrett esophagus, esophageal adenocarcinoma, periodontitis