LINC00235

Summary

LINC00235 (long intergenic non-protein coding RNA 235, HGNC:14138) is a long non-coding RNA gene on chromosome 16p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:14138
Approved symbol	LINC00235
Name	long intergenic non-protein coding RNA 235
Location	16p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000277142
Ensembl biotype	lncRNA
Entrez	64493
RNAcentral	URS000075AC66 — lncRNA, 561 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000622160

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000622160 — 1 exons

Exon	Start	End
ENSE00003734358	525155	527407

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 72.59.

Top tissues by expression

130 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	72.59	gold quality
sural nerve	UBERON:0015488	68.18	gold quality
gastrocnemius	UBERON:0001388	65.91	gold quality
muscle of leg	UBERON:0001383	65.37	gold quality
apex of heart	UBERON:0002098	65.26	gold quality
colonic epithelium	UBERON:0000397	65.02	silver quality
stromal cell of endometrium	CL:0002255	65.01	gold quality
ovary	UBERON:0000992	64.25	gold quality
left ovary	UBERON:0002119	64.12	gold quality
skeletal muscle tissue	UBERON:0001134	63.47	gold quality
right ovary	UBERON:0002118	62.16	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.32	gold quality
islet of Langerhans	UBERON:0000006	60.89	gold quality
cortical plate	UBERON:0005343	60.82	silver quality
ventricular zone	UBERON:0003053	60.53	gold quality
fallopian tube	UBERON:0003889	60.49	gold quality
body of uterus	UBERON:0009853	60.13	gold quality
right lobe of thyroid gland	UBERON:0001119	60.07	gold quality
metanephros cortex	UBERON:0010533	59.72	gold quality
ganglionic eminence	UBERON:0004023	59.43	gold quality
granulocyte	CL:0000094	59.34	gold quality
left uterine tube	UBERON:0001303	59.33	gold quality
cortex of kidney	UBERON:0001225	59.14	gold quality
adenohypophysis	UBERON:0002196	58.94	gold quality
pituitary gland	UBERON:0000007	58.84	gold quality
thyroid gland	UBERON:0002046	58.78	gold quality
myometrium	UBERON:0001296	58.69	gold quality
mucosa of stomach	UBERON:0001199	58.33	gold quality
endocervix	UBERON:0000458	58.28	gold quality
right uterine tube	UBERON:0001302	58.15	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.16

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.