LINC00244

Summary

LINC00244 (long intergenic non-protein coding RNA 244, HGNC:13245) is a long non-coding RNA gene on chromosome 7q36.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:13245
Approved symbol	LINC00244
Name	long intergenic non-protein coding RNA 244
Location	7q36
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000279418
Ensembl biotype	lncRNA
Entrez	64433
RNAcentral	URS000075C04C — lncRNA, 611 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000625073

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000625073 — 1 exons

Exon	Start	End
ENSE00003757642	156540491	156541103

Expression profiles

Bgee: expression breadth broad, 98 present calls, max score 68.30.

Top tissues by expression

98 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
mucosa of transverse colon	UBERON:0004991	68.30	gold quality
right lobe of liver	UBERON:0001114	65.04	gold quality
tonsil	UBERON:0002372	64.46	silver quality
liver	UBERON:0002107	62.04	gold quality
fundus of stomach	UBERON:0001160	55.75	gold quality
body of stomach	UBERON:0001161	54.41	gold quality
transverse colon	UBERON:0001157	54.38	gold quality
stomach	UBERON:0000945	54.14	gold quality
stromal cell of endometrium	CL:0002255	53.04	silver quality
duodenum	UBERON:0002114	52.70	gold quality
prefrontal cortex	UBERON:0000451	51.47	gold quality
colon	UBERON:0001155	51.28	gold quality
intestine	UBERON:0000160	50.99	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	50.56	gold quality
small intestine	UBERON:0002108	50.37	gold quality
lower esophagus mucosa	UBERON:0035834	50.36	gold quality
small intestine Peyer’s patch	UBERON:0003454	50.25	gold quality
cortex of kidney	UBERON:0001225	50.20	gold quality
apex of heart	UBERON:0002098	49.96	gold quality
blood	UBERON:0000178	49.85	silver quality
islet of Langerhans	UBERON:0000006	49.83	gold quality
monocyte	CL:0000576	49.81	silver quality
metanephros cortex	UBERON:0010533	49.64	gold quality
kidney	UBERON:0002113	49.29	gold quality
prostate gland	UBERON:0002367	49.21	gold quality
endometrium	UBERON:0001295	48.79	silver quality
rectum	UBERON:0001052	48.58	gold quality
superior frontal gyrus	UBERON:0002661	48.34	silver quality
right adrenal gland cortex	UBERON:0035827	48.34	gold quality
body of pancreas	UBERON:0001150	48.10	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.98

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• LINC00244 suppresses cell growth and metastasis in hepatocellular carcinoma by downregulating programmed cell death ligand 1. (PMID:35266439)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.