LINC00272

Summary

LINC00272 (long intergenic non-protein coding RNA 272, HGNC:26898) is a long non-coding RNA gene on chromosome 1q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:26898
Approved symbol	LINC00272
Name	long intergenic non-protein coding RNA 272
Location	1q25.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP1-223H12.3
Ensembl gene	ENSG00000203729
Ensembl biotype	lncRNA
Entrez	388719
RNAcentral	URS000075BB77 — lncRNA, 738 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000367563, ENST00000612603

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000367563 — 4 exons

Exon	Start	End
ENSE00001445034	182414686	182414815
ENSE00001445035	182409243	182409360
ENSE00001445036	182408528	182408607
ENSE00001445037	182407621	182408032

Expression profiles

Bgee: expression breadth broad, 84 present calls, max score 61.34.

Top tissues by expression

84 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	61.34	gold quality
cortex of kidney	UBERON:0001225	57.41	gold quality
monocyte	CL:0000576	57.11	gold quality
left coronary artery	UBERON:0001626	56.62	gold quality
blood	UBERON:0000178	55.23	gold quality
right coronary artery	UBERON:0001625	55.04	gold quality
muscle of leg	UBERON:0001383	52.13	gold quality
right testis	UBERON:0004534	51.78	gold quality
heart left ventricle	UBERON:0002084	50.42	gold quality
left testis	UBERON:0004533	49.68	gold quality
gastrocnemius	UBERON:0001388	49.65	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	49.41	silver quality
testis	UBERON:0000473	49.39	gold quality
endometrium	UBERON:0001295	48.88	gold quality
liver	UBERON:0002107	48.69	silver quality
body of pancreas	UBERON:0001150	48.01	silver quality
cerebellar cortex	UBERON:0002129	47.74	silver quality
body of uterus	UBERON:0009853	47.73	gold quality
fallopian tube	UBERON:0003889	47.50	gold quality
tibial artery	UBERON:0007610	47.45	gold quality
cerebellar hemisphere	UBERON:0002245	47.41	silver quality
right hemisphere of cerebellum	UBERON:0014890	46.89	silver quality
right uterine tube	UBERON:0001302	46.85	gold quality
ectocervix	UBERON:0012249	45.96	gold quality
multicellular organism	UBERON:0000468	45.75	gold quality
thoracic mammary gland	UBERON:0005200	45.72	gold quality
prefrontal cortex	UBERON:0000451	45.37	gold quality
myometrium	UBERON:0001296	44.80	gold quality
primary visual cortex	UBERON:0002436	44.66	silver quality
corpus callosum	UBERON:0002336	44.45	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.