LINC00297

Summary

LINC00297 (long intergenic non-protein coding RNA 297, HGNC:39210) is a long non-coding RNA gene on chromosome 13q12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:39210
Approved symbol	LINC00297
Name	long intergenic non-protein coding RNA 297
Location	13q12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224329
Ensembl biotype	lncRNA
Entrez	100874059
RNAcentral	URS0000129B1E — lncRNA, 913 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000453470, ENST00000768376, ENST00000768377

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000453470 — 2 exons

Exon	Start	End
ENSE00001685823	29872613	29873148
ENSE00001784463	29888029	29888405

Expression profiles

Bgee: expression breadth broad, 18 present calls, max score 52.61.

Top tissues by expression

18 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
prefrontal cortex	UBERON:0000451	52.61	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	50.67	gold quality
gastrocnemius	UBERON:0001388	46.49	silver quality
tibial artery	UBERON:0007610	46.12	silver quality
zone of skin	UBERON:0000014	45.68	silver quality
adult mammalian kidney	UBERON:0000082	44.93	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	44.76	gold quality
Brodmann (1909) area 9	UBERON:0013540	44.61	silver quality
putamen	UBERON:0001874	42.66	silver quality
anterior cingulate cortex	UBERON:0009835	41.88	silver quality
right frontal lobe	UBERON:0002810	40.78	silver quality
subcutaneous adipose tissue	UBERON:0002190	40.51	silver quality
substantia nigra	UBERON:0002038	39.22	silver quality
Ammon’s horn	UBERON:0001954	37.75	silver quality
tibial nerve	UBERON:0001323	37.68	silver quality
right ovary	UBERON:0002118	37.54	silver quality
amygdala	UBERON:0001876	36.47	silver quality
testis	UBERON:0000473	30.97	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.