LINC00327

Summary

LINC00327 (long intergenic non-protein coding RNA 327, HGNC:42009) is a long non-coding RNA gene on chromosome 13q12.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:42009
Approved symbol	LINC00327
Name	long intergenic non-protein coding RNA 327
Location	13q12.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232977
Ensembl biotype	lncRNA
Entrez	100506697
RNAcentral	URS000075C7B4 — lncRNA, 2092 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000443778, ENST00000575689, ENST00000576696, ENST00000655268, ENST00000656862, ENST00000658244, ENST00000661061, ENST00000671576

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000443778 — 3 exons

Exon	Start	End
ENSE00001608298	23470514	23470690
ENSE00001637097	23486235	23487464
ENSE00001729822	23469445	23470191

Expression profiles

Bgee: expression breadth ubiquitous, 151 present calls, max score 94.44.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0812 / max 22.1598, expressed in 28 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
134399	0.0521	17
134398	0.0291	12

Top tissues by expression

232 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	94.44	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.03	gold quality
myocardium	UBERON:0002349	75.79	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	73.61	gold quality
sural nerve	UBERON:0015488	71.42	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	67.92	gold quality
stromal cell of endometrium	CL:0002255	67.56	gold quality
ventricular zone	UBERON:0003053	66.43	gold quality
right atrium auricular region	UBERON:0006631	66.15	gold quality
cardiac atrium	UBERON:0002081	65.92	gold quality
tibial nerve	UBERON:0001323	65.64	gold quality
sperm	CL:0000019	64.43	gold quality
cortical plate	UBERON:0005343	64.09	gold quality
skeletal muscle tissue	UBERON:0001134	63.92	gold quality
hindlimb stylopod muscle	UBERON:0004252	63.61	gold quality
colonic epithelium	UBERON:0000397	62.92	silver quality
heart	UBERON:0000948	62.91	gold quality
heart left ventricle	UBERON:0002084	62.55	gold quality
cardiac ventricle	UBERON:0002082	61.99	gold quality
tendon of biceps brachii	UBERON:0008188	61.62	gold quality
gingival epithelium	UBERON:0001949	60.98	gold quality
apex of heart	UBERON:0002098	60.60	gold quality
lower esophagus	UBERON:0013473	60.16	gold quality
lower esophagus muscularis layer	UBERON:0035833	60.15	gold quality
muscle of leg	UBERON:0001383	60.06	gold quality
ganglionic eminence	UBERON:0004023	59.95	gold quality
right coronary artery	UBERON:0001625	59.86	gold quality
vena cava	UBERON:0004087	59.84	gold quality
prefrontal cortex	UBERON:0000451	59.58	gold quality
smooth muscle tissue	UBERON:0001135	59.53	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.58

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.