LINC00332

Summary

LINC00332 (long intergenic non-protein coding RNA 332, HGNC:42049) is a long non-coding RNA gene on chromosome 13q14.11.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:42049
Approved symbol	LINC00332
Name	long intergenic non-protein coding RNA 332
Location	13q14.11
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230710
Ensembl biotype	lncRNA
Entrez	100874127
RNAcentral	URS000075A2BE — lncRNA, 836 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000455241, ENST00000662208, ENST00000818615

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000455241 — 5 exons

Exon	Start	End
ENSE00001605414	40187921	40188022
ENSE00001632461	40186146	40186253
ENSE00001637115	40188459	40189028
ENSE00001637830	40181081	40181862
ENSE00003881762	40172505	40172547

Expression profiles

Bgee: expression breadth broad, 91 present calls, max score 64.96.

Top tissues by expression

91 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
adrenal tissue	UBERON:0018303	64.96	gold quality
skeletal muscle tissue	UBERON:0001134	61.82	silver quality
sural nerve	UBERON:0015488	60.62	gold quality
liver	UBERON:0002107	59.30	gold quality
body of pancreas	UBERON:0001150	57.86	gold quality
body of stomach	UBERON:0001161	57.73	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	57.00	gold quality
stomach	UBERON:0000945	56.86	gold quality
corpus callosum	UBERON:0002336	56.52	gold quality
pancreas	UBERON:0001264	55.68	gold quality
right lobe of liver	UBERON:0001114	54.93	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.62	silver quality
fallopian tube	UBERON:0003889	53.75	gold quality
right uterine tube	UBERON:0001302	53.63	gold quality
endometrium	UBERON:0001295	53.26	gold quality
monocyte	CL:0000576	52.21	silver quality
fundus of stomach	UBERON:0001160	52.02	gold quality
lymph node	UBERON:0000029	51.60	gold quality
calcaneal tendon	UBERON:0003701	51.51	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	51.36	silver quality
muscle of leg	UBERON:0001383	51.18	gold quality
omental fat pad	UBERON:0010414	51.13	gold quality
adipose tissue	UBERON:0001013	51.12	gold quality
gastrocnemius	UBERON:0001388	51.06	gold quality
subcutaneous adipose tissue	UBERON:0002190	51.03	gold quality
blood	UBERON:0000178	49.81	silver quality
prefrontal cortex	UBERON:0000451	49.81	gold quality
adrenal gland	UBERON:0002369	49.67	gold quality
placenta	UBERON:0001987	49.65	gold quality
urinary bladder	UBERON:0001255	49.50	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.46

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• Inhibitory role of LINC00332 in gastric cancer progression through regulating cell EMT and stemness. (PMID:35787995)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.