LINC00345

Summary

LINC00345 (long intergenic non-protein coding RNA 345, HGNC:42503) is a long non-coding RNA gene on chromosome 13q14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:42503
Approved symbol	LINC00345
Name	long intergenic non-protein coding RNA 345
Location	13q14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235660
Ensembl biotype	lncRNA
Entrez	105370208
RNAcentral	URS00026A20D5 — lncRNA, 3330 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000443679, ENST00000647901, ENST00000740150, ENST00000740151, ENST00000740152, ENST00000740153, ENST00000740154, ENST00000740155

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000443679 — 2 exons

Exon	Start	End
ENSE00001651858	52484520	52484680
ENSE00001751528	52484161	52484284

Expression profiles

Bgee: expression breadth ubiquitous, 129 present calls, max score 91.62.

Top tissues by expression

129 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	91.62	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.00	gold quality
endometrium	UBERON:0001295	80.67	gold quality
corpus callosum	UBERON:0002336	77.65	gold quality
calcaneal tendon	UBERON:0003701	77.46	gold quality
granulocyte	CL:0000094	76.01	gold quality
lower esophagus mucosa	UBERON:0035834	75.10	gold quality
thyroid gland	UBERON:0002046	74.73	gold quality
right lobe of thyroid gland	UBERON:0001119	74.45	gold quality
left lobe of thyroid gland	UBERON:0001120	74.20	gold quality
mucosa of transverse colon	UBERON:0004991	73.86	gold quality
spleen	UBERON:0002106	73.47	gold quality
body of pancreas	UBERON:0001150	72.82	gold quality
small intestine Peyer’s patch	UBERON:0003454	72.79	gold quality
small intestine	UBERON:0002108	72.05	gold quality
right uterine tube	UBERON:0001302	71.92	gold quality
gall bladder	UBERON:0002110	71.43	gold quality
monocyte	CL:0000576	71.30	gold quality
prostate gland	UBERON:0002367	71.26	gold quality
leukocyte	CL:0000738	71.05	gold quality
right lobe of liver	UBERON:0001114	70.64	gold quality
lymph node	UBERON:0000029	70.54	gold quality
ectocervix	UBERON:0012249	70.43	gold quality
transverse colon	UBERON:0001157	70.37	gold quality
right coronary artery	UBERON:0001625	69.79	gold quality
uterine cervix	UBERON:0000002	69.65	gold quality
intestine	UBERON:0000160	69.33	gold quality
liver	UBERON:0002107	68.90	gold quality
right adrenal gland cortex	UBERON:0035827	68.90	gold quality
cortical plate	UBERON:0005343	68.89	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.