LINC00358

Summary

LINC00358 (long intergenic non-protein coding RNA 358, HGNC:42678) is a long non-coding RNA gene on chromosome 13q21.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:42678
Approved symbol	LINC00358
Name	long intergenic non-protein coding RNA 358
Location	13q21.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229578
Ensembl biotype	lncRNA
Entrez	100874143
RNAcentral	URS000075A72C — lncRNA, 1276 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000432697, ENST00000662481, ENST00000834848, ENST00000834849, ENST00000834850

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000432697 — 2 exons

Exon	Start	End
ENSE00004252692	62029259	62029561
ENSE00004252700	62003525	62004510

Expression profiles

Bgee: expression breadth broad, 19 present calls, max score 84.80.

Top tissues by expression

164 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.80	gold quality
buccal mucosa cell	CL:0002336	64.59	silver quality
gastrocnemius	UBERON:0001388	63.47	gold quality
left testis	UBERON:0004533	61.23	gold quality
right testis	UBERON:0004534	59.91	gold quality
testis	UBERON:0000473	59.40	gold quality
tibial nerve	UBERON:0001323	52.08	gold quality
monocyte	CL:0000576	50.24	silver quality
ascending aorta	UBERON:0001496	47.27	gold quality
upper lobe of lung	UBERON:0008948	45.05	silver quality
lower lobe of lung	UBERON:0008949	44.89	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
skin of hip	UBERON:0001554	43.26	silver quality
anatomical system	UBERON:0000467	42.94	gold quality
transverse colon	UBERON:0001157	42.75	silver quality
multicellular organism	UBERON:0000468	42.70	gold quality
material anatomical entity	UBERON:0000465	42.68	gold quality
amygdala	UBERON:0001876	42.58	gold quality
secondary oocyte	CL:0000655	42.57	gold quality
aorta	UBERON:0000947	41.91	silver quality
lung	UBERON:0002048	41.65	gold quality
vastus lateralis	UBERON:0001379	41.41	gold quality
tibial artery	UBERON:0007610	41.38	silver quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
prefrontal cortex	UBERON:0000451	41.35	gold quality
adult mammalian kidney	UBERON:0000082	41.34	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
bone marrow	UBERON:0002371	41.14	gold quality
skeletal muscle tissue	UBERON:0001134	41.10	gold quality
palpebral conjunctiva	UBERON:0001812	41.10	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.