LINC00364

Summary

LINC00364 (long intergenic non-protein coding RNA 364, HGNC:42686) is a long non-coding RNA gene on chromosome 13q21.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:42686
Approved symbol	LINC00364
Name	long intergenic non-protein coding RNA 364
Location	13q21.32
Locus type	RNA, long non-coding
Status	Approved
Aliases	LncRNA00364
Ensembl gene	ENSG00000230040
Ensembl biotype	lncRNA
Entrez	100874145
RNAcentral	URS0000812100 — lncRNA, 645 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000415120, ENST00000656527, ENST00000826316, ENST00000826317, ENST00000826318

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000415120 — 3 exons

Exon	Start	End
ENSE00001611571	67372387	67372470
ENSE00001788265	67379551	67379976
ENSE00001800970	67374865	67374965

Expression profiles

Bgee: expression breadth broad, 78 present calls, max score 85.61.

Top tissues by expression

78 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.61	gold quality
sural nerve	UBERON:0015488	81.76	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	67.35	gold quality
left testis	UBERON:0004533	61.92	gold quality
right testis	UBERON:0004534	61.19	gold quality
testis	UBERON:0000473	61.16	gold quality
cortical plate	UBERON:0005343	59.99	gold quality
gall bladder	UBERON:0002110	58.10	gold quality
blood	UBERON:0000178	56.37	gold quality
vermiform appendix	UBERON:0001154	55.49	gold quality
islet of Langerhans	UBERON:0000006	54.10	gold quality
primary visual cortex	UBERON:0002436	53.19	gold quality
prefrontal cortex	UBERON:0000451	52.14	gold quality
monocyte	CL:0000576	51.52	silver quality
right atrium auricular region	UBERON:0006631	50.67	gold quality
fallopian tube	UBERON:0003889	49.93	gold quality
heart	UBERON:0000948	49.90	gold quality
Brodmann (1909) area 9	UBERON:0013540	49.18	gold quality
heart left ventricle	UBERON:0002084	49.16	gold quality
multicellular organism	UBERON:0000468	48.50	gold quality
frontal cortex	UBERON:0001870	47.78	gold quality
left adrenal gland cortex	UBERON:0035825	47.32	gold quality
gastrocnemius	UBERON:0001388	47.06	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	46.31	gold quality
tibial nerve	UBERON:0001323	46.16	gold quality
cerebral cortex	UBERON:0000956	46.10	gold quality
saliva-secreting gland	UBERON:0001044	45.81	gold quality
body of pancreas	UBERON:0001150	45.77	gold quality
cerebellar cortex	UBERON:0002129	45.19	silver quality
cerebellar hemisphere	UBERON:0002245	45.17	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.