LINC00366

Summary

LINC00366 (long intergenic non-protein coding RNA 366, HGNC:42688) is a long non-coding RNA gene on chromosome 13q13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:42688
Approved symbol	LINC00366
Name	long intergenic non-protein coding RNA 366
Location	13q13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229437
Ensembl biotype	lncRNA
Entrez	100874147
RNAcentral	URS000075A93C — lncRNA, 531 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000441430, ENST00000653597, ENST00000657759, ENST00000664797, ENST00000756170, ENST00000756171, ENST00000756172, ENST00000756173, ENST00000756174, ENST00000756175

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000441430 — 4 exons

Exon	Start	End
ENSE00001738628	38577605	38577710
ENSE00004105977	38578729	38578994
ENSE00004105981	38567738	38567795
ENSE00004105984	38576525	38576702

Expression profiles

Bgee: expression breadth ubiquitous, 113 present calls, max score 80.43.

Top tissues by expression

113 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.43	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.80	gold quality
sural nerve	UBERON:0015488	73.49	gold quality
cortical plate	UBERON:0005343	67.24	gold quality
monocyte	CL:0000576	63.79	gold quality
ganglionic eminence	UBERON:0004023	63.47	gold quality
ventricular zone	UBERON:0003053	62.24	gold quality
skeletal muscle tissue	UBERON:0001134	62.15	silver quality
testis	UBERON:0000473	61.69	gold quality
left testis	UBERON:0004533	61.08	gold quality
calcaneal tendon	UBERON:0003701	59.23	gold quality
right testis	UBERON:0004534	59.17	gold quality
kidney	UBERON:0002113	56.68	gold quality
bone marrow	UBERON:0002371	55.35	gold quality
liver	UBERON:0002107	55.24	silver quality
hindlimb stylopod muscle	UBERON:0004252	53.50	silver quality
duodenum	UBERON:0002114	53.11	gold quality
lymph node	UBERON:0000029	52.47	gold quality
vermiform appendix	UBERON:0001154	52.11	gold quality
muscle of leg	UBERON:0001383	52.11	gold quality
descending thoracic aorta	UBERON:0002345	51.85	gold quality
gastrocnemius	UBERON:0001388	51.47	gold quality
adult mammalian kidney	UBERON:0000082	51.00	gold quality
blood	UBERON:0000178	50.95	gold quality
prefrontal cortex	UBERON:0000451	49.73	gold quality
heart left ventricle	UBERON:0002084	49.00	gold quality
endometrium	UBERON:0001295	48.83	gold quality
islet of Langerhans	UBERON:0000006	48.68	gold quality
adrenal tissue	UBERON:0018303	48.06	gold quality
pancreas	UBERON:0001264	47.79	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.