LINC00469

Summary

LINC00469 (long intergenic non-protein coding RNA 469, HGNC:26863) is a long non-coding RNA gene on chromosome 17q25.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:26863
Approved symbol	LINC00469
Name	long intergenic non-protein coding RNA 469
Location	17q25.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ40319
Ensembl gene	ENSG00000177338
Ensembl biotype	lncRNA
Entrez	283982
RNAcentral	URS000075A883 — lncRNA, 1549 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000321800, ENST00000544677, ENST00000579749, ENST00000665734

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000321800 — 4 exons

Exon	Start	End
ENSE00001262878	73760935	73761026
ENSE00001414307	73823688	73823825
ENSE00001556257	73828448	73828520
ENSE00002218969	73750330	73750734

Expression profiles

Bgee: expression breadth broad, 78 present calls, max score 83.74.

Top tissues by expression

78 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.74	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	67.42	gold quality
blood	UBERON:0000178	61.07	gold quality
granulocyte	CL:0000094	60.10	gold quality
gall bladder	UBERON:0002110	59.05	gold quality
spleen	UBERON:0002106	57.72	gold quality
cortex of kidney	UBERON:0001225	57.57	gold quality
islet of Langerhans	UBERON:0000006	57.35	gold quality
leukocyte	CL:0000738	56.68	gold quality
right lung	UBERON:0002167	55.98	gold quality
urinary bladder	UBERON:0001255	55.74	gold quality
liver	UBERON:0002107	55.19	silver quality
adrenal gland	UBERON:0002369	54.98	gold quality
lung	UBERON:0002048	53.81	gold quality
bone marrow	UBERON:0002371	53.77	gold quality
pancreas	UBERON:0001264	53.05	gold quality
body of pancreas	UBERON:0001150	52.61	gold quality
upper lobe of left lung	UBERON:0008952	52.53	gold quality
prefrontal cortex	UBERON:0000451	51.80	gold quality
monocyte	CL:0000576	51.32	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	50.75	gold quality
colon	UBERON:0001155	50.16	gold quality
multicellular organism	UBERON:0000468	50.09	gold quality
vagina	UBERON:0000996	49.92	gold quality
tonsil	UBERON:0002372	48.92	gold quality
vermiform appendix	UBERON:0001154	47.96	gold quality
gastrocnemius	UBERON:0001388	47.48	silver quality
small intestine	UBERON:0002108	47.37	gold quality
heart left ventricle	UBERON:0002084	47.27	gold quality
right lobe of liver	UBERON:0001114	47.15	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.11

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.