LINC00502

Summary

LINC00502 (long intergenic non-protein coding RNA 502, HGNC:43442) is a long non-coding RNA gene on chromosome 10q23.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:43442
Approved symbol	LINC00502
Name	long intergenic non-protein coding RNA 502
Location	10q23.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224851
Ensembl biotype	lncRNA
Entrez	100874184
RNAcentral	URS000075E53E — lncRNA, 540 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000423621, ENST00000846440, ENST00000846441, ENST00000846442, ENST00000846443, ENST00000846444

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000423621 — 8 exons

Exon	Start	End
ENSE00001597344	91047901	91048029
ENSE00001769384	91047012	91047300
ENSE00001777188	91061979	91062164
ENSE00003837555	91033157	91033194
ENSE00003838518	91045737	91045930
ENSE00003839519	91044822	91044854
ENSE00003839641	91039353	91039408
ENSE00003840145	91040803	91040877

Expression profiles

Bgee: expression breadth broad, 38 present calls, max score 83.06.

Top tissues by expression

38 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.06	silver quality
skeletal muscle tissue	UBERON:0001134	66.76	silver quality
substantia nigra	UBERON:0002038	63.12	gold quality
caudate nucleus	UBERON:0001873	60.23	gold quality
putamen	UBERON:0001874	60.20	gold quality
hindlimb stylopod muscle	UBERON:0004252	58.58	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	56.77	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	53.44	gold quality
muscle of leg	UBERON:0001383	52.89	gold quality
right testis	UBERON:0004534	52.42	gold quality
islet of Langerhans	UBERON:0000006	51.27	gold quality
monocyte	CL:0000576	51.11	gold quality
blood	UBERON:0000178	49.72	gold quality
Ammon’s horn	UBERON:0001954	49.66	gold quality
testis	UBERON:0000473	49.11	gold quality
amygdala	UBERON:0001876	48.53	gold quality
left testis	UBERON:0004533	48.26	gold quality
multicellular organism	UBERON:0000468	47.70	gold quality
left adrenal gland cortex	UBERON:0035825	47.60	gold quality
hypothalamus	UBERON:0001898	46.72	gold quality
esophagus mucosa	UBERON:0002469	46.66	gold quality
prefrontal cortex	UBERON:0000451	45.82	silver quality
liver	UBERON:0002107	45.78	silver quality
gastrocnemius	UBERON:0001388	44.92	silver quality
heart left ventricle	UBERON:0002084	44.25	gold quality
adrenal gland	UBERON:0002369	42.90	gold quality
right adrenal gland	UBERON:0001233	42.69	silver quality
nucleus accumbens	UBERON:0001882	42.51	silver quality
tibial artery	UBERON:0007610	42.36	silver quality
left adrenal gland	UBERON:0001234	42.31	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.45

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.