LINC00519

Summary

LINC00519 (long intergenic non-protein coding RNA 519, HGNC:19838) is a long non-coding RNA gene on chromosome 14q22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:19838
Approved symbol	LINC00519
Name	long intergenic non-protein coding RNA 519
Location	14q22.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258955
Ensembl biotype	lncRNA
Entrez	161342
RNAcentral	URS0000ABD7DD — lncRNA, 786 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000557518, ENST00000669155, ENST00000790335

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000557518 — 2 exons

Exon	Start	End
ENSE00004170494	51328130	51328565
ENSE00004170495	51304101	51304840

Expression profiles

Bgee: expression breadth ubiquitous, 122 present calls, max score 78.80.

Top tissues by expression

122 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.80	gold quality
sural nerve	UBERON:0015488	76.13	silver quality
stromal cell of endometrium	CL:0002255	74.72	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	69.05	gold quality
muscle tissue	UBERON:0002385	63.12	gold quality
tonsil	UBERON:0002372	61.93	gold quality
smooth muscle tissue	UBERON:0001135	61.78	gold quality
skeletal muscle tissue	UBERON:0001134	60.94	silver quality
lower esophagus mucosa	UBERON:0035834	60.93	gold quality
esophagus mucosa	UBERON:0002469	58.69	gold quality
body of uterus	UBERON:0009853	58.44	gold quality
ectocervix	UBERON:0012249	58.23	gold quality
ganglionic eminence	UBERON:0004023	58.05	gold quality
myometrium	UBERON:0001296	58.03	gold quality
uterine cervix	UBERON:0000002	57.77	gold quality
gall bladder	UBERON:0002110	57.49	gold quality
vagina	UBERON:0000996	57.06	gold quality
right adrenal gland cortex	UBERON:0035827	57.06	gold quality
esophagus	UBERON:0001043	56.67	gold quality
rectum	UBERON:0001052	56.35	gold quality
bone marrow	UBERON:0002371	56.11	gold quality
endocervix	UBERON:0000458	55.47	gold quality
islet of Langerhans	UBERON:0000006	55.42	gold quality
placenta	UBERON:0001987	54.77	gold quality
lymph node	UBERON:0000029	54.48	gold quality
calcaneal tendon	UBERON:0003701	54.45	gold quality
monocyte	CL:0000576	54.19	gold quality
urinary bladder	UBERON:0001255	54.18	gold quality
lower esophagus	UBERON:0013473	54.06	gold quality
lower esophagus muscularis layer	UBERON:0035833	53.93	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.25

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.