LINC00526

Summary

LINC00526 (long intergenic non-protein coding RNA 526, HGNC:28278) is a long non-coding RNA gene on chromosome 18p11.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:28278
Approved symbol	LINC00526
Name	long intergenic non-protein coding RNA 526
Location	18p11.31
Locus type	RNA, long non-coding
Status	Approved
Aliases	MGC17515, HsT959, TP53LC13
Ensembl gene	ENSG00000264575
Ensembl biotype	lncRNA
Entrez	147525
RNAcentral	URS000075D6F3 — lncRNA, 1322 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000579933, ENST00000581067, ENST00000581170, ENST00000813949, ENST00000813950, ENST00000813951, ENST00000813952, ENST00000813953

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000579933 — 3 exons

Exon	Start	End
ENSE00002700347	5232876	5233510
ENSE00002705762	5238247	5238526
ENSE00002719644	5235839	5235900

Expression profiles

Bgee: expression breadth ubiquitous, 190 present calls, max score 88.96.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2288 / max 18.8720, expressed in 70 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
171092	0.2288	70

Top tissues by expression

241 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ileal mucosa	UBERON:0000331	88.96	gold quality
jejunal mucosa	UBERON:0000399	83.69	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	83.10	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.58	gold quality
epithelial cell of pancreas	CL:0000083	81.51	gold quality
duodenum	UBERON:0002114	79.98	gold quality
right lobe of liver	UBERON:0001114	79.76	gold quality
ganglionic eminence	UBERON:0004023	77.77	gold quality
kidney epithelium	UBERON:0004819	77.66	gold quality
biceps brachii	UBERON:0001507	77.48	silver quality
liver	UBERON:0002107	76.59	gold quality
pancreatic ductal cell	CL:0002079	76.54	silver quality
cardiac muscle of right atrium	UBERON:0003379	76.48	gold quality
left ventricle myocardium	UBERON:0006566	76.41	gold quality
tibialis anterior	UBERON:0001385	76.35	silver quality
cortical plate	UBERON:0005343	76.29	gold quality
mucosa of sigmoid colon	UBERON:0004993	76.17	gold quality
secondary oocyte	CL:0000655	76.02	silver quality
colonic mucosa	UBERON:0000317	75.86	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	75.70	silver quality
endothelial cell	CL:0000115	75.41	gold quality
jejunum	UBERON:0002115	74.49	gold quality
mucosa of transverse colon	UBERON:0004991	73.78	gold quality
ventricular zone	UBERON:0003053	73.24	gold quality
deltoid	UBERON:0001476	73.05	silver quality
cerebellar hemisphere	UBERON:0002245	72.84	gold quality
cerebellar cortex	UBERON:0002129	72.80	gold quality
islet of Langerhans	UBERON:0000006	72.72	gold quality
right hemisphere of cerebellum	UBERON:0014890	72.47	gold quality
cerebellum	UBERON:0002037	72.46	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.