LINC00529

Summary

LINC00529 (long intergenic non-protein coding RNA 529, HGNC:15544) is a long non-coding RNA gene on chromosome 8p23-p22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:15544
Approved symbol	LINC00529
Name	long intergenic non-protein coding RNA 529
Location	8p23-p22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236827
Ensembl biotype	lncRNA
Entrez	83647
RNAcentral	URS0002123255 — lncRNA, 1084 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000443854, ENST00000622929, ENST00000638924, ENST00000711291, ENST00000725070, ENST00000725071, ENST00000725072

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000443854 — 6 exons

Exon	Start	End
ENSE00001622401	11267789	11267865
ENSE00001653274	11247626	11247789
ENSE00004013923	11205710	11205795
ENSE00004013925	11211717	11211846
ENSE00004013926	11268127	11268185
ENSE00004013929	11206269	11206428

Expression profiles

Bgee: expression breadth broad, 41 present calls, max score 66.83.

Top tissues by expression

41 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
blood	UBERON:0000178	66.83	gold quality
superior frontal gyrus	UBERON:0002661	65.43	gold quality
monocyte	CL:0000576	64.69	gold quality
Brodmann (1909) area 9	UBERON:0013540	60.61	gold quality
body of pancreas	UBERON:0001150	59.37	gold quality
amygdala	UBERON:0001876	55.68	gold quality
hypothalamus	UBERON:0001898	55.63	gold quality
gastrocnemius	UBERON:0001388	55.46	gold quality
lower esophagus muscularis layer	UBERON:0035833	53.98	gold quality
testis	UBERON:0000473	53.25	gold quality
transverse colon	UBERON:0001157	53.20	gold quality
left testis	UBERON:0004533	52.96	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	52.35	gold quality
skin of abdomen	UBERON:0001416	52.30	gold quality
muscle layer of sigmoid colon	UBERON:0035805	52.26	gold quality
right testis	UBERON:0004534	51.66	gold quality
cerebral cortex	UBERON:0000956	51.56	gold quality
brain	UBERON:0000955	51.28	gold quality
putamen	UBERON:0001874	50.98	gold quality
nucleus accumbens	UBERON:0001882	50.49	gold quality
substantia nigra	UBERON:0002038	50.39	gold quality
tibial artery	UBERON:0007610	49.70	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	49.63	gold quality
endocervix	UBERON:0000458	49.52	gold quality
cerebellar hemisphere	UBERON:0002245	49.42	silver quality
skin of leg	UBERON:0001511	49.07	gold quality
right frontal lobe	UBERON:0002810	49.00	gold quality
omental fat pad	UBERON:0010414	48.96	gold quality
right atrium auricular region	UBERON:0006631	48.86	gold quality
caudate nucleus	UBERON:0001873	48.60	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.17

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.